BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012895
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_182260.1| putative cytochrome c oxidase subunit 5C-1 [Ara...    88   6e-16
ref|XP_002880298.1| cytochrome c oxidase subunit VC family prote...    88   6e-16
ref|XP_002862722.1| cytochrome c oxidase subunit VC family prote...    88   6e-16
gb|AGE46018.1| cytochrome c oxidase subunit 5C [Elaeis guineensis]     88   8e-16
sp|Q9LZQ0.1|CX5C2_ARATH RecName: Full=Cytochrome c oxidase subun...    87   1e-15

>ref|NP_182260.1| putative cytochrome c oxidase subunit 5C-1 [Arabidopsis thaliana]
           gi|48427900|sp|O22912.1|CX5C1_ARATH RecName:
           Full=Probable cytochrome c oxidase subunit 5C-1;
           AltName: Full=Cytochrome c oxidase polypeptide Vc-1
           gi|2275216|gb|AAB63838.1| putative cytochrome c oxidase
           Vc subunit [Arabidopsis thaliana]
           gi|17979511|gb|AAL50091.1| At2g47380/T8I13.22
           [Arabidopsis thaliana] gi|20147289|gb|AAM10358.1|
           At2g47380/T8I13.22 [Arabidopsis thaliana]
           gi|330255740|gb|AEC10834.1| putative cytochrome c
           oxidase subunit 5C-1 [Arabidopsis thaliana]
          Length = 64

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/64 (67%), Positives = 45/64 (70%)
 Frame = -3

Query: 413 MAAHKIAHATLKGPSVVKEXXXXXXXXXXXXXLWKMHHWNEQRKVREFYHMLNRGEISVV 234
           MA HK+AHATLKGPSVVKE             LWKMHHWNEQRK R FY +L RGEISVV
Sbjct: 1   MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 233 AEEE 222
           A EE
Sbjct: 61  AAEE 64


>ref|XP_002880298.1| cytochrome c oxidase subunit VC family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326137|gb|EFH56557.1| cytochrome c
           oxidase subunit VC family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 64

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/64 (67%), Positives = 45/64 (70%)
 Frame = -3

Query: 413 MAAHKIAHATLKGPSVVKEXXXXXXXXXXXXXLWKMHHWNEQRKVREFYHMLNRGEISVV 234
           MA HK+AHATLKGPSVVKE             LWKMHHWNEQRK R FY +L RGEISVV
Sbjct: 1   MAGHKVAHATLKGPSVVKELVIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 233 AEEE 222
           A EE
Sbjct: 61  AAEE 64


>ref|XP_002862722.1| cytochrome c oxidase subunit VC family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297817580|ref|XP_002876673.1|
           cytochrome c oxidase subunit VC family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297308410|gb|EFH38980.1| cytochrome c oxidase subunit
           VC family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322511|gb|EFH52932.1| cytochrome c oxidase subunit
           VC family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 64

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/64 (67%), Positives = 45/64 (70%)
 Frame = -3

Query: 413 MAAHKIAHATLKGPSVVKEXXXXXXXXXXXXXLWKMHHWNEQRKVREFYHMLNRGEISVV 234
           MA HK+AHATLKGPSVVKE             LWKMHHWNEQRK R FY +L RGEISVV
Sbjct: 1   MAGHKVAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 233 AEEE 222
           A EE
Sbjct: 61  AAEE 64


>gb|AGE46018.1| cytochrome c oxidase subunit 5C [Elaeis guineensis]
          Length = 63

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/63 (68%), Positives = 45/63 (71%)
 Frame = -3

Query: 413 MAAHKIAHATLKGPSVVKEXXXXXXXXXXXXXLWKMHHWNEQRKVREFYHMLNRGEISVV 234
           MAAHKIAHATL+GPSVVKE             LWKMHHWNEQRK R FY ML +GEISVV
Sbjct: 1   MAAHKIAHATLRGPSVVKEIFIGITLGLFAGSLWKMHHWNEQRKTRAFYDMLEKGEISVV 60

Query: 233 AEE 225
            EE
Sbjct: 61  VEE 63


>sp|Q9LZQ0.1|CX5C2_ARATH RecName: Full=Cytochrome c oxidase subunit 5C-2; AltName:
           Full=Cytochrome c oxidase polypeptide Vc-2
           gi|7340711|emb|CAB82954.1| cytochrome c oxidase subunit
           5c-like protein [Arabidopsis thaliana]
          Length = 64

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/64 (65%), Positives = 44/64 (68%)
 Frame = -3

Query: 413 MAAHKIAHATLKGPSVVKEXXXXXXXXXXXXXLWKMHHWNEQRKVREFYHMLNRGEISVV 234
           MA HK+AHATLKGPSVVKE             LWKMHHWNEQRK R FY +L RGEI VV
Sbjct: 1   MAGHKVAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERGEIGVV 60

Query: 233 AEEE 222
           A EE
Sbjct: 61  ASEE 64