BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012879
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37573.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-l...    95   5e-18
ref|XP_002309892.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_003602569.1| WD repeat-containing protein, putative [Medi...    91   1e-16
ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communi...    89   5e-16

>emb|CBI37573.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = -1

Query: 387 GKVRIWGVSESRVVDWADVRDIITAICYQPDGQGFIVGSISGHCRFYDAS 238
           GKVRIWGVSE RVVDWADVRD+ITAICYQPDG+GFIVGS++G C FY+AS
Sbjct: 375 GKVRIWGVSERRVVDWADVRDVITAICYQPDGKGFIVGSVTGTCCFYNAS 424


>ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 674

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = -1

Query: 387 GKVRIWGVSESRVVDWADVRDIITAICYQPDGQGFIVGSISGHCRFYDAS 238
           GKVRIWGVSE RVVDWADVRD+ITAICYQPDG+GFIVGS++G C FY+AS
Sbjct: 381 GKVRIWGVSERRVVDWADVRDVITAICYQPDGKGFIVGSVTGTCCFYNAS 430


>ref|XP_002309892.1| predicted protein [Populus trichocarpa] gi|222852795|gb|EEE90342.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 38/50 (76%), Positives = 45/50 (90%)
 Frame = -1

Query: 387 GKVRIWGVSESRVVDWADVRDIITAICYQPDGQGFIVGSISGHCRFYDAS 238
           GKVR+WGVSE RVV WADVRD+I+AICYQPDG+GF+VG+I G CRFY+ S
Sbjct: 317 GKVRVWGVSEKRVVHWADVRDVISAICYQPDGRGFVVGTIIGSCRFYEVS 366


>ref|XP_003602569.1| WD repeat-containing protein, putative [Medicago truncatula]
           gi|355491617|gb|AES72820.1| WD repeat-containing
           protein, putative [Medicago truncatula]
          Length = 676

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = -1

Query: 387 GKVRIWGVSESRVVDWADVRDIITAICYQPDGQGFIVGSISGHCRFYDAS 238
           GKVRIWGV E RVVDWADVRDII+AI YQPDG+GF+VGS+SG CRFY AS
Sbjct: 344 GKVRIWGVHEERVVDWADVRDIISAISYQPDGKGFVVGSLSGTCRFYVAS 393


>ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543598|gb|EEF45127.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 654

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 37/50 (74%), Positives = 43/50 (86%)
 Frame = -1

Query: 387 GKVRIWGVSESRVVDWADVRDIITAICYQPDGQGFIVGSISGHCRFYDAS 238
           GKVRIWGV E RVVDW D  D+ +AICYQPDG+GF+VGSI+G CRFY+AS
Sbjct: 362 GKVRIWGVCEQRVVDWVDAHDVTSAICYQPDGKGFVVGSITGTCRFYEAS 411