BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012878
         (1282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit ...   513   e-143
ref|XP_002330530.1| predicted protein [Populus trichocarpa] gi|2...   499   e-139
gb|AFK36185.1| unknown [Lotus japonicus]                              498   e-138
ref|XP_003522838.1| PREDICTED: COP9 signalosome complex subunit ...   496   e-138
ref|XP_002529210.1| signalosome subunit, putative [Ricinus commu...   496   e-138

>ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit 6a [Vitis vinifera]
            gi|296090054|emb|CBI39873.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  513 bits (1320), Expect = e-143
 Identities = 259/310 (83%), Positives = 274/310 (88%), Gaps = 4/310 (1%)
 Frame = -2

Query: 1212 GLTFKLHPLVILNISDHYTRVKSQSQFGLVGGTNG----ASGSAQPPAPRVFGCVIGIQK 1045
            GLTFKLHPLVI+NISDHYTRVKSQ+Q   +    G    A+ S  PP PRVFGCVIG+Q+
Sbjct: 8    GLTFKLHPLVIVNISDHYTRVKSQTQPPHLSSNGGEGAAAAASPPPPPPRVFGCVIGVQR 67

Query: 1044 GRTVEIFNSFELLYDESTNSLDRPFLEKKQELYKKVFPNFYILGWYSTGSDAQESDMQIH 865
            GRTVEIFNSFELLYD ST+SLDR FLEKKQELYKKVFPNFYILGWYSTGSDAQESDM IH
Sbjct: 68   GRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPNFYILGWYSTGSDAQESDMHIH 127

Query: 864  KALMDINESPLYVLLNPAINHAHKDLPLTIYESELHVIDGIPQLIFVRSSYTIETVEAER 685
            KALMDINESP+YVLLNP+INHA KDLP+TIYESELHVIDGIPQLIFVR++YTIETVEAER
Sbjct: 128  KALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIDGIPQLIFVRANYTIETVEAER 187

Query: 684  ISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPYENXX 505
            ISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIP EN  
Sbjct: 188  ISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPCENSL 247

Query: 504  XXXXXXXXXXLPAIESEKFQDDFLMEYNDTLLVTYLAMITNCSSAMNELVDKFNTAYDRH 325
                      LPAIES KFQDDFLMEYNDTLL++YLAM TNCSS MNELVDKFNTAYDRH
Sbjct: 248  LRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMFTNCSSTMNELVDKFNTAYDRH 307

Query: 324  GRRGGRSAFI 295
             RRGGR+AFI
Sbjct: 308  SRRGGRTAFI 317


>ref|XP_002330530.1| predicted protein [Populus trichocarpa] gi|222872088|gb|EEF09219.1|
            predicted protein [Populus trichocarpa]
          Length = 306

 Score =  499 bits (1284), Expect = e-139
 Identities = 256/308 (83%), Positives = 271/308 (87%), Gaps = 2/308 (0%)
 Frame = -2

Query: 1212 GLTFKLHPLVILNISDHYTRVKSQSQFGLVGGTNGAS--GSAQPPAPRVFGCVIGIQKGR 1039
            GLTFKLHPLVI+NISDHYTRVKSQ        TNG S  GSA PP PRV+GCVIG+Q+GR
Sbjct: 8    GLTFKLHPLVIVNISDHYTRVKSQ--------TNGCSDGGSASPP-PRVYGCVIGVQRGR 58

Query: 1038 TVEIFNSFELLYDESTNSLDRPFLEKKQELYKKVFPNFYILGWYSTGSDAQESDMQIHKA 859
            TVEIFNSFELLYD  T+SLDR F+EKKQELYKKVFP+FYILGWYSTGSDA+ESDM IHKA
Sbjct: 59   TVEIFNSFELLYDPVTHSLDRAFIEKKQELYKKVFPHFYILGWYSTGSDAEESDMHIHKA 118

Query: 858  LMDINESPLYVLLNPAINHAHKDLPLTIYESELHVIDGIPQLIFVRSSYTIETVEAERIS 679
            LMDINESP+YVLLNP+IN A KDLP+TIYESELHVIDGIPQLIFV SSYTIETVEAERIS
Sbjct: 119  LMDINESPVYVLLNPSINPAQKDLPVTIYESELHVIDGIPQLIFVCSSYTIETVEAERIS 178

Query: 678  VDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPYENXXXX 499
            VDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYL+AMQKG+IP EN    
Sbjct: 179  VDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENSLLR 238

Query: 498  XXXXXXXXLPAIESEKFQDDFLMEYNDTLLVTYLAMITNCSSAMNELVDKFNTAYDRHGR 319
                    LPAIESEKFQDDFLMEYNDTLL+ YLAM TNCSS MNELVDKFNTAYDRH R
Sbjct: 239  QVSSLLRRLPAIESEKFQDDFLMEYNDTLLIAYLAMFTNCSSTMNELVDKFNTAYDRHSR 298

Query: 318  RGGRSAFI 295
            RGGR+AFI
Sbjct: 299  RGGRTAFI 306


>gb|AFK36185.1| unknown [Lotus japonicus]
          Length = 317

 Score =  498 bits (1281), Expect = e-138
 Identities = 250/310 (80%), Positives = 272/310 (87%), Gaps = 4/310 (1%)
 Frame = -2

Query: 1212 GLTFKLHPLVILNISDHYTRVKSQSQFGLVGG----TNGASGSAQPPAPRVFGCVIGIQK 1045
            GLTFKLHPLVI+NISDHYTRVKSQ    L       +NGA G      PRV+GCVIG+QK
Sbjct: 8    GLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNSVPSNGADGVVSSVPPRVYGCVIGVQK 67

Query: 1044 GRTVEIFNSFELLYDESTNSLDRPFLEKKQELYKKVFPNFYILGWYSTGSDAQESDMQIH 865
            GRTVEIFNSFELLYD ST+SLDRPFLEKKQELYKKVFP+FYILGWYSTGSDA+ESDM IH
Sbjct: 68   GRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAEESDMNIH 127

Query: 864  KALMDINESPLYVLLNPAINHAHKDLPLTIYESELHVIDGIPQLIFVRSSYTIETVEAER 685
            +ALMDINESP+YVLLNP+INH+ KDLP++I+ESELHVIDGIPQLIFVRSSYTIETVEAER
Sbjct: 128  RALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAER 187

Query: 684  ISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPYENXX 505
            ISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKML+SRI+VLHHYLLAMQKGD+P EN  
Sbjct: 188  ISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDVPCENSL 247

Query: 504  XXXXXXXXXXLPAIESEKFQDDFLMEYNDTLLVTYLAMITNCSSAMNELVDKFNTAYDRH 325
                      LPAIES KFQDDFLM YNDTLL++YL M+TNCSSAMNELVDKFNTAYDRH
Sbjct: 248  LRQVSSLLRRLPAIESGKFQDDFLMGYNDTLLISYLTMLTNCSSAMNELVDKFNTAYDRH 307

Query: 324  GRRGGRSAFI 295
             RRGGR+AF+
Sbjct: 308  SRRGGRTAFM 317


>ref|XP_003522838.1| PREDICTED: COP9 signalosome complex subunit 6a-like [Glycine max]
          Length = 318

 Score =  496 bits (1277), Expect = e-138
 Identities = 249/311 (80%), Positives = 271/311 (87%), Gaps = 5/311 (1%)
 Frame = -2

Query: 1212 GLTFKLHPLVILNISDHYTRVKSQSQFGLV-----GGTNGASGSAQPPAPRVFGCVIGIQ 1048
            GLTFKLHPLVI+NISDHYTRVKSQ              NG  G   P +PRV+GCVIG+Q
Sbjct: 8    GLTFKLHPLVIVNISDHYTRVKSQMNPTHAPPHNNNNANGGDGVVSPLSPRVYGCVIGVQ 67

Query: 1047 KGRTVEIFNSFELLYDESTNSLDRPFLEKKQELYKKVFPNFYILGWYSTGSDAQESDMQI 868
            KGRTVEIFNSFELLYD S++SLDR FLEKKQELYKKVFP+FYILGWYSTGSDA+ESDM I
Sbjct: 68   KGRTVEIFNSFELLYDPSSHSLDRTFLEKKQELYKKVFPHFYILGWYSTGSDAEESDMHI 127

Query: 867  HKALMDINESPLYVLLNPAINHAHKDLPLTIYESELHVIDGIPQLIFVRSSYTIETVEAE 688
            HKALMDINESP+YVLLNP+INH+ KDLP++I+ESELHVIDGIPQLIFVRSSYTIETVEAE
Sbjct: 128  HKALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAE 187

Query: 687  RISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPYENX 508
            RISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKML+SRI+VLHHYLLAMQKGD+P EN 
Sbjct: 188  RISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDVPCENS 247

Query: 507  XXXXXXXXXXXLPAIESEKFQDDFLMEYNDTLLVTYLAMITNCSSAMNELVDKFNTAYDR 328
                       LPAIES KFQDDFLMEYNDTLL++YLAM+TNCSSAMNELVDKFN AYDR
Sbjct: 248  LLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNELVDKFNIAYDR 307

Query: 327  HGRRGGRSAFI 295
            H RRGGR+AF+
Sbjct: 308  HSRRGGRTAFM 318


>ref|XP_002529210.1| signalosome subunit, putative [Ricinus communis]
            gi|223531328|gb|EEF33166.1| signalosome subunit, putative
            [Ricinus communis]
          Length = 318

 Score =  496 bits (1277), Expect = e-138
 Identities = 253/311 (81%), Positives = 268/311 (86%), Gaps = 5/311 (1%)
 Frame = -2

Query: 1212 GLTFKLHPLVILNISDHYTRVKSQSQFGLVGGTNGAS-----GSAQPPAPRVFGCVIGIQ 1048
            GLTFKLHPLVI+NISDHYTRVKSQ    +   TNG S      +     PRV+GCVIG+Q
Sbjct: 8    GLTFKLHPLVIVNISDHYTRVKSQMNPPVTTTTNGGSDGGGENTVSLAPPRVYGCVIGVQ 67

Query: 1047 KGRTVEIFNSFELLYDESTNSLDRPFLEKKQELYKKVFPNFYILGWYSTGSDAQESDMQI 868
            +GRTVEIFNSFELLYD  T+SLDR FLEKKQELYKKVFP+FYILGWYSTGSDA+ESDM I
Sbjct: 68   RGRTVEIFNSFELLYDPITHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAEESDMHI 127

Query: 867  HKALMDINESPLYVLLNPAINHAHKDLPLTIYESELHVIDGIPQLIFVRSSYTIETVEAE 688
            HKALMDINESP+YVLLNP+IN A KDLP+ IYESELHVIDGIPQLIFVRSSYTIETVEAE
Sbjct: 128  HKALMDINESPVYVLLNPSINPAQKDLPVIIYESELHVIDGIPQLIFVRSSYTIETVEAE 187

Query: 687  RISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPYENX 508
            RISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYL AMQKG+IP EN 
Sbjct: 188  RISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLAAMQKGEIPCENS 247

Query: 507  XXXXXXXXXXXLPAIESEKFQDDFLMEYNDTLLVTYLAMITNCSSAMNELVDKFNTAYDR 328
                       LPAIESEKFQDDFLMEYNDTLL+TYLAM TNCSS MNELVDKFNTAYDR
Sbjct: 248  LLRQVSSLLRRLPAIESEKFQDDFLMEYNDTLLITYLAMFTNCSSTMNELVDKFNTAYDR 307

Query: 327  HGRRGGRSAFI 295
            H RRGGR+AFI
Sbjct: 308  HSRRGGRTAFI 318