BLASTX nr result

ID: Coptis23_contig00012864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012864
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263191.1| PREDICTED: uncharacterized protein LOC100261...    75   4e-12
ref|XP_002305794.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002329783.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
emb|CBI23968.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002517904.1| conserved hypothetical protein [Ricinus comm...    62   6e-08

>ref|XP_002263191.1| PREDICTED: uncharacterized protein LOC100261530 [Vitis vinifera]
          Length = 309

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/79 (55%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
 Frame = -3

Query: 230 GDAASLMDMMFEFYDDGE------VSTESCSTNSIEDYDYDQVDDEKSPDSSSVEERKVF 69
           G AASL DM F F +DGE       ST  CS N   D D D  D EK+  SSSVEE K F
Sbjct: 27  GQAASLSDMAFGFLEDGEGWPESFSSTGGCSENGALDDDEDDADKEKN--SSSVEENKNF 84

Query: 68  WEAQQEVLHETLSRTSSLE 12
           WE+Q ++LH TL RTSSLE
Sbjct: 85  WESQHQILHTTLCRTSSLE 103


>ref|XP_002305794.1| predicted protein [Populus trichocarpa] gi|222848758|gb|EEE86305.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/74 (47%), Positives = 50/74 (67%)
 Frame = -3

Query: 224 AASLMDMMFEFYDDGEVSTESCSTNSIEDYDYDQVDDEKSPDSSSVEERKVFWEAQQEVL 45
           AASL DM+F F +DG+ S+ S  +    + +  +++DE   ++ +VEE K FWE Q ++L
Sbjct: 29  AASLSDMVFGFLEDGDWSSGSSGSEGCHENEMLELEDEGEENNGNVEEDKSFWENQHQLL 88

Query: 44  HETLSRTSSLESRI 3
           H TL RTSSLESRI
Sbjct: 89  HATLFRTSSLESRI 102


>ref|XP_002329783.1| predicted protein [Populus trichocarpa] gi|222870845|gb|EEF07976.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/74 (44%), Positives = 48/74 (64%)
 Frame = -3

Query: 224 AASLMDMMFEFYDDGEVSTESCSTNSIEDYDYDQVDDEKSPDSSSVEERKVFWEAQQEVL 45
           A SL DM+F F +DGE  +ES S+    +     +++E+  ++ +VEE + FWE Q ++L
Sbjct: 30  APSLSDMVFGFLEDGESWSESGSSEGYHENKIMDLEEEEEENNGNVEENRSFWENQHQLL 89

Query: 44  HETLSRTSSLESRI 3
           H TL RTSSLES I
Sbjct: 90  HATLCRTSSLESSI 103


>emb|CBI23968.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/71 (53%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
 Frame = -3

Query: 206 MMFEFYDDGE------VSTESCSTNSIEDYDYDQVDDEKSPDSSSVEERKVFWEAQQEVL 45
           M F F +DGE       ST  CS N   D D D  D EK+  SSSVEE K FWE+Q ++L
Sbjct: 1   MAFGFLEDGEGWPESFSSTGGCSENGALDDDEDDADKEKN--SSSVEENKNFWESQHQIL 58

Query: 44  HETLSRTSSLE 12
           H TL RTSSLE
Sbjct: 59  HTTLCRTSSLE 69


>ref|XP_002517904.1| conserved hypothetical protein [Ricinus communis]
           gi|223542886|gb|EEF44422.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 292

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = -3

Query: 236 FTGDAASLMDMMFEFYDDGEVSTES-CSTNSIEDYDYDQVDDEKSPDSSSVEERKVFWEA 60
           F+  A S  D++F F ++ E S +S C +N       D ++D++   SSSVEE + FWE 
Sbjct: 17  FSDQAGSFADIVFGFLEEQEESPKSSCDSN-------DYLEDDEDDSSSSVEENRKFWET 69

Query: 59  QQEVLHETLSRTSSLESRI 3
           Q+E+L  TL RTSSLE +I
Sbjct: 70  QEELLQATLYRTSSLEMKI 88


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