BLASTX nr result

ID: Coptis23_contig00012862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012862
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37573.3| unnamed protein product [Vitis vinifera]              195   4e-48
ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-l...   195   4e-48
ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communi...   185   4e-45
ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207...   182   3e-44
ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42

>emb|CBI37573.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  195 bits (495), Expect = 4e-48
 Identities = 98/147 (66%), Positives = 113/147 (76%)
 Frame = -1

Query: 493 FYDASDNHLQLDAQVYVQGRKKSSSNRITGLQFSPEDAQKVMITSADSKVRIFDGLGVVH 314
           FY+AS NHLQLDA+V   GRKK+S N+ITG+QFS E++QKVMITS DSK+RI DG+ VV+
Sbjct: 420 FYNASGNHLQLDAKVNFHGRKKTSGNKITGIQFSQEESQKVMITSEDSKLRILDGIDVVY 479

Query: 313 KYRGLRKSGSQMSASFTSNGRHIISVGXXXXXXXXXXXXXXXXXXXEDSRVYVWNYDGSM 134
           KY+GLRKSGSQMSASFTS GRHI+SVG                   EDSRVYVWNYDG  
Sbjct: 480 KYKGLRKSGSQMSASFTSTGRHIVSVG-------------------EDSRVYVWNYDGFC 520

Query: 133 CASSKQAKSIRSCEHFFFEGVSVAVPW 53
             SSKQ KS++SCEHFFFEGVSVA+PW
Sbjct: 521 SQSSKQMKSVQSCEHFFFEGVSVAIPW 547


>ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 674

 Score =  195 bits (495), Expect = 4e-48
 Identities = 98/147 (66%), Positives = 113/147 (76%)
 Frame = -1

Query: 493 FYDASDNHLQLDAQVYVQGRKKSSSNRITGLQFSPEDAQKVMITSADSKVRIFDGLGVVH 314
           FY+AS NHLQLDA+V   GRKK+S N+ITG+QFS E++QKVMITS DSK+RI DG+ VV+
Sbjct: 426 FYNASGNHLQLDAKVNFHGRKKTSGNKITGIQFSQEESQKVMITSEDSKLRILDGIDVVY 485

Query: 313 KYRGLRKSGSQMSASFTSNGRHIISVGXXXXXXXXXXXXXXXXXXXEDSRVYVWNYDGSM 134
           KY+GLRKSGSQMSASFTS GRHI+SVG                   EDSRVYVWNYDG  
Sbjct: 486 KYKGLRKSGSQMSASFTSTGRHIVSVG-------------------EDSRVYVWNYDGFC 526

Query: 133 CASSKQAKSIRSCEHFFFEGVSVAVPW 53
             SSKQ KS++SCEHFFFEGVSVA+PW
Sbjct: 527 SQSSKQMKSVQSCEHFFFEGVSVAIPW 553


>ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543598|gb|EEF45127.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 654

 Score =  185 bits (469), Expect = 4e-45
 Identities = 94/157 (59%), Positives = 113/157 (71%)
 Frame = -1

Query: 496 RFYDASDNHLQLDAQVYVQGRKKSSSNRITGLQFSPEDAQKVMITSADSKVRIFDGLGVV 317
           RFY+AS N LQL A+++VQGRK+++ NRITG+QFS E  Q+VMI+S DSK+RI DG+ +V
Sbjct: 406 RFYEASGNDLQLGAEIHVQGRKRTAGNRITGIQFSQERPQRVMISSEDSKLRILDGVDIV 465

Query: 316 HKYRGLRKSGSQMSASFTSNGRHIISVGXXXXXXXXXXXXXXXXXXXEDSRVYVWNYDGS 137
           HKY+GL KSGSQMSASFTS G+HIISVG                   ED RVYVW+YD  
Sbjct: 466 HKYKGLPKSGSQMSASFTSGGKHIISVG-------------------EDCRVYVWDYDEL 506

Query: 136 MCASSKQAKSIRSCEHFFFEGVSVAVPWFGMEQERMD 26
              SSK  KS+RSCEHFF EGVS+AVPW GM +E  D
Sbjct: 507 CTPSSKHKKSVRSCEHFFSEGVSIAVPWSGMRKELKD 543


>ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207772 [Cucumis sativus]
           gi|449507515|ref|XP_004163054.1| PREDICTED:
           uncharacterized LOC101207772 [Cucumis sativus]
          Length = 668

 Score =  182 bits (461), Expect = 3e-44
 Identities = 94/165 (56%), Positives = 117/165 (70%)
 Frame = -1

Query: 496 RFYDASDNHLQLDAQVYVQGRKKSSSNRITGLQFSPEDAQKVMITSADSKVRIFDGLGVV 317
           RFY+ S ++L L AQ+ VQGRKK+S  RITG+QF  E++Q+VMITS DSKVRIF+G  ++
Sbjct: 415 RFYETSGDYLHLSAQINVQGRKKASGKRITGIQFFRENSQRVMITSEDSKVRIFEGTEII 474

Query: 316 HKYRGLRKSGSQMSASFTSNGRHIISVGXXXXXXXXXXXXXXXXXXXEDSRVYVWNYDGS 137
           HKY+GL KSGSQMSASFT NG+HI+SVG                   EDSRVY+WNYD  
Sbjct: 475 HKYKGLPKSGSQMSASFTKNGKHIVSVG-------------------EDSRVYMWNYDSL 515

Query: 136 MCASSKQAKSIRSCEHFFFEGVSVAVPWFGMEQERMDPNIKSSSQ 2
              SSK+AKS +SCEHFF +GVSVA+PW G+  E   PN  S++Q
Sbjct: 516 FLPSSKEAKSQQSCEHFFSDGVSVAIPWSGVGTE---PNCFSNNQ 557


>ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|222838192|gb|EEE76557.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score =  175 bits (444), Expect = 3e-42
 Identities = 90/154 (58%), Positives = 109/154 (70%)
 Frame = -1

Query: 496 RFYDASDNHLQLDAQVYVQGRKKSSSNRITGLQFSPEDAQKVMITSADSKVRIFDGLGVV 317
           RFY+ S   LQL+A+V++QGR+++S NRIT +QFS E   +VMITS DSKVR+FDG+ +V
Sbjct: 409 RFYEVSGTDLQLEAEVHIQGRRRTSGNRITSIQFSQEICPRVMITSEDSKVRVFDGVDIV 468

Query: 316 HKYRGLRKSGSQMSASFTSNGRHIISVGXXXXXXXXXXXXXXXXXXXEDSRVYVWNYDGS 137
           +K++GL KSGSQMSASFTSNGRHIISVG                   ED RVYVWNYDG 
Sbjct: 469 NKFKGLPKSGSQMSASFTSNGRHIISVG-------------------EDCRVYVWNYDGL 509

Query: 136 MCASSKQAKSIRSCEHFFFEGVSVAVPWFGMEQE 35
             + SK  KS++SCE FF EGVSVAVPW G   E
Sbjct: 510 CTSWSKHIKSVKSCEFFFSEGVSVAVPWSGTGTE 543


Top