BLASTX nr result

ID: Coptis23_contig00012861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012861
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263206.2| PREDICTED: phosphoribosylaminoimidazole carb...    80   3e-37
emb|CAN83526.1| hypothetical protein VITISV_024806 [Vitis vinifera]    80   3e-37
emb|CBI35194.3| unnamed protein product [Vitis vinifera]               80   3e-37
gb|AAL48287.1|AF452495_1 aminoimidazole ribonucleotide carboxyla...    77   1e-36
ref|XP_002521948.1| phosphoribosylaminoimidazole carboxylase atp...    75   2e-35

>ref|XP_002263206.2| PREDICTED: phosphoribosylaminoimidazole carboxylase,
           chloroplastic-like [Vitis vinifera]
          Length = 634

 Score = 79.7 bits (195), Expect(3) = 3e-37
 Identities = 37/43 (86%), Positives = 39/43 (90%)
 Frame = -1

Query: 131 LAVIVARGRGNNISCYPVVETIHKDNICHIVKAPADGSWKIRR 3
           LAVIVARGR N+I CYPVVETIHK+NICHIVKAPAD  WKIRR
Sbjct: 266 LAVIVARGRDNSILCYPVVETIHKENICHIVKAPADVPWKIRR 308



 Score = 73.2 bits (178), Expect(3) = 3e-37
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = -2

Query: 268 RRLVYDGRGNVVAHSEEEISSSVYVLGGYDRGLYVEKWAPFKKELA 131
           +RL YDGRGN VA SE E+SS+V  LGGY+ GLY+EKWAPF KELA
Sbjct: 222 KRLAYDGRGNAVAKSEVELSSAVTALGGYEHGLYIEKWAPFVKELA 267



 Score = 47.8 bits (112), Expect(3) = 3e-37
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = -3

Query: 336 FMQIDDLDSAKRAGELFGYPLMIE 265
           FMQIDDL+SAKRAG+LFGYPLMI+
Sbjct: 197 FMQIDDLESAKRAGDLFGYPLMIK 220


>emb|CAN83526.1| hypothetical protein VITISV_024806 [Vitis vinifera]
          Length = 604

 Score = 79.7 bits (195), Expect(3) = 3e-37
 Identities = 37/43 (86%), Positives = 39/43 (90%)
 Frame = -1

Query: 131 LAVIVARGRGNNISCYPVVETIHKDNICHIVKAPADGSWKIRR 3
           LAVIVARGR N+I CYPVVETIHK+NICHIVKAPAD  WKIRR
Sbjct: 242 LAVIVARGRDNSILCYPVVETIHKENICHIVKAPADVPWKIRR 284



 Score = 73.2 bits (178), Expect(3) = 3e-37
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = -2

Query: 268 RRLVYDGRGNVVAHSEEEISSSVYVLGGYDRGLYVEKWAPFKKELA 131
           +RL YDGRGN VA SE E+SS+V  LGGY+ GLY+EKWAPF KELA
Sbjct: 198 KRLAYDGRGNAVAKSEVELSSAVTALGGYEHGLYIEKWAPFVKELA 243



 Score = 47.8 bits (112), Expect(3) = 3e-37
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = -3

Query: 336 FMQIDDLDSAKRAGELFGYPLMIE 265
           FMQIDDL+SAKRAG+LFGYPLMI+
Sbjct: 173 FMQIDDLESAKRAGDLFGYPLMIK 196


>emb|CBI35194.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score = 79.7 bits (195), Expect(3) = 3e-37
 Identities = 37/43 (86%), Positives = 39/43 (90%)
 Frame = -1

Query: 131 LAVIVARGRGNNISCYPVVETIHKDNICHIVKAPADGSWKIRR 3
           LAVIVARGR N+I CYPVVETIHK+NICHIVKAPAD  WKIRR
Sbjct: 223 LAVIVARGRDNSILCYPVVETIHKENICHIVKAPADVPWKIRR 265



 Score = 73.2 bits (178), Expect(3) = 3e-37
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = -2

Query: 268 RRLVYDGRGNVVAHSEEEISSSVYVLGGYDRGLYVEKWAPFKKELA 131
           +RL YDGRGN VA SE E+SS+V  LGGY+ GLY+EKWAPF KELA
Sbjct: 179 KRLAYDGRGNAVAKSEVELSSAVTALGGYEHGLYIEKWAPFVKELA 224



 Score = 47.8 bits (112), Expect(3) = 3e-37
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = -3

Query: 336 FMQIDDLDSAKRAGELFGYPLMIE 265
           FMQIDDL+SAKRAG+LFGYPLMI+
Sbjct: 154 FMQIDDLESAKRAGDLFGYPLMIK 177


>gb|AAL48287.1|AF452495_1 aminoimidazole ribonucleotide carboxylase [Vigna unguiculata]
          Length = 634

 Score = 77.0 bits (188), Expect(3) = 1e-36
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = -2

Query: 268 RRLVYDGRGNVVAHSEEEISSSVYVLGGYDRGLYVEKWAPFKKELA 131
           RRL YDGRGN VA SEEE+SS+V  LGG+DRGLY EKWAPF KELA
Sbjct: 221 RRLAYDGRGNFVAKSEEELSSAVDALGGFDRGLYAEKWAPFVKELA 266



 Score = 77.0 bits (188), Expect(3) = 1e-36
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -1

Query: 131 LAVIVARGRGNNISCYPVVETIHKDNICHIVKAPADGSWKIR 6
           LAVIVARGR N+ISCYPVVETIH+DNICHIVKAPA+  WK R
Sbjct: 265 LAVIVARGRDNSISCYPVVETIHRDNICHIVKAPANVKWKTR 306



 Score = 44.7 bits (104), Expect(3) = 1e-36
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = -3

Query: 336 FMQIDDLDSAKRAGELFGYPLMIE 265
           FM+IDDL+SAK+ GELFGYPLMI+
Sbjct: 196 FMKIDDLESAKKVGELFGYPLMIK 219


>ref|XP_002521948.1| phosphoribosylaminoimidazole carboxylase atpase-subunit, putative
           [Ricinus communis] gi|223538752|gb|EEF40352.1|
           phosphoribosylaminoimidazole carboxylase atpase-subunit,
           putative [Ricinus communis]
          Length = 629

 Score = 75.1 bits (183), Expect(3) = 2e-35
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -2

Query: 268 RRLVYDGRGNVVAHSEEEISSSVYVLGGYDRGLYVEKWAPFKKELA 131
           RRL YDGRGN VA +EE++SS+V  LGG++RGLYVEKWAPF KELA
Sbjct: 221 RRLAYDGRGNAVAKTEEDLSSAVTALGGFERGLYVEKWAPFIKELA 266



 Score = 74.3 bits (181), Expect(3) = 2e-35
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -1

Query: 131 LAVIVARGRGNNISCYPVVETIHKDNICHIVKAPADGSWKIRR 3
           LAVIVARGR N+I CYPVVETIH++NICHIVKAPA+  WKI++
Sbjct: 265 LAVIVARGRDNSILCYPVVETIHRENICHIVKAPANVPWKIKK 307



 Score = 45.1 bits (105), Expect(3) = 2e-35
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = -3

Query: 336 FMQIDDLDSAKRAGELFGYPLMIE 265
           FMQIDDL+ AKRAG+L+GYPLMI+
Sbjct: 196 FMQIDDLEGAKRAGDLYGYPLMIK 219


Top