BLASTX nr result
ID: Coptis23_contig00012859
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00012859 (355 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631975.1| PREDICTED: signal recognition particle 19 kD... 90 2e-16 emb|CBI25945.3| unnamed protein product [Vitis vinifera] 89 3e-16 emb|CBI25992.3| unnamed protein product [Vitis vinifera] 89 4e-16 ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kD... 89 4e-16 ref|XP_002894097.1| predicted protein [Arabidopsis lyrata subsp.... 87 1e-15 >ref|XP_003631975.1| PREDICTED: signal recognition particle 19 kDa protein-like [Vitis vinifera] Length = 62 Score = 89.7 bits (221), Expect = 2e-16 Identities = 42/57 (73%), Positives = 47/57 (82%) Frame = +2 Query: 185 EVVNIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPEK 355 EV NIKKWIVFYP+YINSKKTIA+GRR+S SKACENP EI DCC HL+L A E+ Sbjct: 4 EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIEE 60 >emb|CBI25945.3| unnamed protein product [Vitis vinifera] Length = 169 Score = 89.4 bits (220), Expect = 3e-16 Identities = 42/56 (75%), Positives = 46/56 (82%) Frame = +2 Query: 185 EVVNIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 352 EV NIKKWIVFYP+YINSKKTIA+GRR+S SKACENP EI DCC HL+L A E Sbjct: 38 EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIE 93 >emb|CBI25992.3| unnamed protein product [Vitis vinifera] Length = 212 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/56 (75%), Positives = 46/56 (82%) Frame = +2 Query: 185 EVVNIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 352 EV NIKKWIVFYP+YINSKKTIA+GRR+S SKACENP EI DCC HL+L A E Sbjct: 81 EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIE 136 >ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kDa protein [Vitis vinifera] Length = 135 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/56 (75%), Positives = 46/56 (82%) Frame = +2 Query: 185 EVVNIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 352 EV NIKKWIVFYP+YINSKKTIA+GRR+S SKACENP EI DCC HL+L A E Sbjct: 4 EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIE 59 >ref|XP_002894097.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297339939|gb|EFH70356.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 145 Score = 87.0 bits (214), Expect = 1e-15 Identities = 38/54 (70%), Positives = 45/54 (83%) Frame = +2 Query: 191 VNIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 352 VNIKKW+V YP+YINSKKT+A+GRRIS SK+CENP EI DCC+HL+L A E Sbjct: 6 VNIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVE 59