BLASTX nr result

ID: Coptis23_contig00012859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012859
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631975.1| PREDICTED: signal recognition particle 19 kD...    90   2e-16
emb|CBI25945.3| unnamed protein product [Vitis vinifera]               89   3e-16
emb|CBI25992.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kD...    89   4e-16
ref|XP_002894097.1| predicted protein [Arabidopsis lyrata subsp....    87   1e-15

>ref|XP_003631975.1| PREDICTED: signal recognition particle 19 kDa protein-like [Vitis
           vinifera]
          Length = 62

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/57 (73%), Positives = 47/57 (82%)
 Frame = +2

Query: 185 EVVNIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPEK 355
           EV NIKKWIVFYP+YINSKKTIA+GRR+S SKACENP   EI DCC HL+L  A E+
Sbjct: 4   EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIEE 60


>emb|CBI25945.3| unnamed protein product [Vitis vinifera]
          Length = 169

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/56 (75%), Positives = 46/56 (82%)
 Frame = +2

Query: 185 EVVNIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 352
           EV NIKKWIVFYP+YINSKKTIA+GRR+S SKACENP   EI DCC HL+L  A E
Sbjct: 38  EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIE 93


>emb|CBI25992.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/56 (75%), Positives = 46/56 (82%)
 Frame = +2

Query: 185 EVVNIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 352
           EV NIKKWIVFYP+YINSKKTIA+GRR+S SKACENP   EI DCC HL+L  A E
Sbjct: 81  EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIE 136


>ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kDa protein [Vitis
           vinifera]
          Length = 135

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/56 (75%), Positives = 46/56 (82%)
 Frame = +2

Query: 185 EVVNIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 352
           EV NIKKWIVFYP+YINSKKTIA+GRR+S SKACENP   EI DCC HL+L  A E
Sbjct: 4   EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIE 59


>ref|XP_002894097.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339939|gb|EFH70356.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 145

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = +2

Query: 191 VNIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 352
           VNIKKW+V YP+YINSKKT+A+GRRIS SK+CENP   EI DCC+HL+L  A E
Sbjct: 6   VNIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVE 59


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