BLASTX nr result

ID: Coptis23_contig00012855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012855
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524759.1| lipid binding protein, putative [Ricinus com...    91   1e-16
ref|XP_002300829.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
emb|CBI28714.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_003632313.1| PREDICTED: non-specific lipid-transfer prote...    88   8e-16
ref|XP_002278952.1| PREDICTED: non-specific lipid-transfer prote...    85   5e-15

>ref|XP_002524759.1| lipid binding protein, putative [Ricinus communis]
           gi|223535943|gb|EEF37602.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 187

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/98 (48%), Positives = 59/98 (60%)
 Frame = +2

Query: 68  MASKLITFCLAIVLVTIFSSGAMAQSGCTIAMIGLSPCLNFVTGNXXXXXXXXXXQLASI 247
           MA K +     +VLV +   GA+AQSGCT A++GL+PCLN+VTGN          QLA++
Sbjct: 1   MALKRVEMIAFLVLVMMICHGAVAQSGCTSALMGLAPCLNYVTGNSSTPSSSCCSQLATV 60

Query: 248 VQSQPXXXXXXXXXXXXXXXXXINQTLALALPGACNVQ 361
           VQSQP                 INQTLAL+LPGACNVQ
Sbjct: 61  VQSQPQCLCAMLNGGGSSLGITINQTLALSLPGACNVQ 98


>ref|XP_002300829.1| predicted protein [Populus trichocarpa] gi|222842555|gb|EEE80102.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/98 (51%), Positives = 58/98 (59%)
 Frame = +2

Query: 68  MASKLITFCLAIVLVTIFSSGAMAQSGCTIAMIGLSPCLNFVTGNXXXXXXXXXXQLASI 247
           MASK +   L +VL  +   GA AQSGCT A++GL PCLN+VTGN          QLA+I
Sbjct: 1   MASKGVQLSLMLVLSMMLCHGATAQSGCTTALMGLVPCLNYVTGNSSTPSSSCCSQLATI 60

Query: 248 VQSQPXXXXXXXXXXXXXXXXXINQTLALALPGACNVQ 361
           VQSQP                 INQTLALALPGACNV+
Sbjct: 61  VQSQPQCLCTLVNGGGSSFGIAINQTLALALPGACNVK 98


>emb|CBI28714.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/89 (50%), Positives = 56/89 (62%)
 Frame = +2

Query: 95  LAIVLVTIFSSGAMAQSGCTIAMIGLSPCLNFVTGNXXXXXXXXXXQLASIVQSQPXXXX 274
           LA+VL+T+   GAMAQSGCT  +IGL+PCLN+++GN          QLA++VQSQP    
Sbjct: 126 LALVLLTLLWHGAMAQSGCTRVLIGLAPCLNYISGNSSTPSSSCCSQLANVVQSQPQCLC 185

Query: 275 XXXXXXXXXXXXXINQTLALALPGACNVQ 361
                        INQTLAL LPGACNV+
Sbjct: 186 AALNSGGAGLGITINQTLALQLPGACNVK 214


>ref|XP_003632313.1| PREDICTED: non-specific lipid-transfer protein-like protein
           At2g13820-like [Vitis vinifera]
          Length = 187

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/89 (50%), Positives = 56/89 (62%)
 Frame = +2

Query: 95  LAIVLVTIFSSGAMAQSGCTIAMIGLSPCLNFVTGNXXXXXXXXXXQLASIVQSQPXXXX 274
           LA+VL+T+   GAMAQSGCT  +IGL+PCLN+++GN          QLA++VQSQP    
Sbjct: 10  LALVLLTLLWHGAMAQSGCTRVLIGLAPCLNYISGNSSTPSSSCCSQLANVVQSQPQCLC 69

Query: 275 XXXXXXXXXXXXXINQTLALALPGACNVQ 361
                        INQTLAL LPGACNV+
Sbjct: 70  AALNSGGAGLGITINQTLALQLPGACNVK 98


>ref|XP_002278952.1| PREDICTED: non-specific lipid-transfer protein-like protein
           At2g13820-like [Vitis vinifera]
          Length = 181

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/98 (45%), Positives = 58/98 (59%)
 Frame = +2

Query: 68  MASKLITFCLAIVLVTIFSSGAMAQSGCTIAMIGLSPCLNFVTGNXXXXXXXXXXQLASI 247
           MA ++    L +VL  +  + AMAQSGCT  +IG++PCLN++TG+          QLAS+
Sbjct: 1   MALRVTGMGLVVVLSAMLWAKAMAQSGCTTVLIGMAPCLNYITGSSSSPSSSCCSQLASV 60

Query: 248 VQSQPXXXXXXXXXXXXXXXXXINQTLALALPGACNVQ 361
           VQSQP                 IN+TLALALPGACNVQ
Sbjct: 61  VQSQPRCLCVALNGGGAALGITINRTLALALPGACNVQ 98


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