BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012852
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276763.1| PREDICTED: uncharacterized protein LOC100264...   306   6e-81
gb|AEG66932.1| plastid transcriptionally active [Gossypium hirsu...   290   4e-76
gb|AAF14021.1|AC011436_5 unknown protein [Arabidopsis thaliana]       277   2e-72
ref|NP_566346.1| plastid transcriptionally active 13 [Arabidopsi...   277   2e-72
gb|AAM65289.1| unknown [Arabidopsis thaliana]                         274   3e-71

>ref|XP_002276763.1| PREDICTED: uncharacterized protein LOC100264906 [Vitis vinifera]
           gi|297740266|emb|CBI30448.3| unnamed protein product
           [Vitis vinifera]
          Length = 339

 Score =  306 bits (783), Expect = 6e-81
 Identities = 159/275 (57%), Positives = 194/275 (70%), Gaps = 4/275 (1%)
 Frame = -2

Query: 814 NWXXXXXXXXXXKPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFLAR 635
           NW          KP KR+A+W +ELNLDNLA LG QWW VRVSRV+G E+A+RLAR LAR
Sbjct: 65  NWREEVEERLLKKPKKRYASWTEELNLDNLALLGPQWWVVRVSRVSGQESAERLARSLAR 124

Query: 634 NHPVVEFKVYAPAVHVKRTLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGGF 455
           N P ++FKVY P+V VKR LKNG+ISVKPKP+FPGC+FL CVLNKE HD IRECDGIGGF
Sbjct: 125 NFPDIDFKVYVPSVQVKRKLKNGSISVKPKPLFPGCVFLRCVLNKETHDFIRECDGIGGF 184

Query: 454 IGSKVGNTKKQINRPRPVSTEDIEAIFRQAKEEQEKADQAFDEEQRSEGILKNEEI---- 287
           +GSKVGNTK+QIN+PRPVS +DIEAIF+Q+KEEQEKAD+AF+EEQ+ E  +  E++    
Sbjct: 185 VGSKVGNTKRQINKPRPVSVDDIEAIFKQSKEEQEKADKAFEEEQQKEETINPEKLIIYP 244

Query: 286 NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXTGADDKLLXXXXXXXXXXXXXSEFKGS 107
           + D+ +  ++ V +                   T   DKLL             +EF GS
Sbjct: 245 HLDSKDVTISVV-DSKPKRRSRKASKPIADGASTAKHDKLLKPGSTVRVVSGTFTEFSGS 303

Query: 106 LKKLDPASGKATVGFMLFGKESFVDLDMNQIVAET 2
           LKKLD  +GKATVGF LFGKE+ VDLD+N+IVAET
Sbjct: 304 LKKLDRKNGKATVGFTLFGKETLVDLDVNEIVAET 338


>gb|AEG66932.1| plastid transcriptionally active [Gossypium hirsutum]
          Length = 345

 Score =  290 bits (742), Expect = 4e-76
 Identities = 151/273 (55%), Positives = 183/273 (67%), Gaps = 1/273 (0%)
 Frame = -2

Query: 817 YNWXXXXXXXXXXKPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFLA 638
           Y+W          KP KR+ +W +ELNLDNLA LG QWW VRVSR+ G ETA+  AR LA
Sbjct: 73  YSWREEVEERLIKKPKKRYTSWTEELNLDNLAHLGPQWWVVRVSRLRGLETAEVTARVLA 132

Query: 637 RNHPVVEFKVYAPAVHVKRTLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGG 458
           RN P +EFK+Y PAV  K+ LKNG+ISVKPKP+FPGC+FL CVLNKE+HD IRECDG+GG
Sbjct: 133 RNFPNIEFKIYTPAVQEKKRLKNGSISVKPKPLFPGCVFLRCVLNKEIHDFIRECDGVGG 192

Query: 457 FIGSKVGNTKKQINRPRPVSTEDIEAIFRQAKEEQEKADQAFDEEQRSEGILKNEEINSD 278
           F+GSKVGNTK+QIN+PRPVS +D+EAIFRQAK EQEKADQAF EEQ+ E  L ++++N +
Sbjct: 193 FVGSKVGNTKRQINKPRPVSVDDMEAIFRQAKVEQEKADQAFQEEQQGENALMSDKMNIE 252

Query: 277 AIETVVNAVGNXXXXXXXXXXXXXXXXXXXTGAD-DKLLXXXXXXXXXXXXXSEFKGSLK 101
                 N V +                    GA   K L             +EF GSLK
Sbjct: 253 -YNVDSNGVTSSVLDTKPKRQTKKKSDTVVNGAKYSKQLVPGSKVRVLSGNFAEFIGSLK 311

Query: 100 KLDPASGKATVGFMLFGKESFVDLDMNQIVAET 2
           KL+  +GKATVGF LFGKE+ VDLD+  +V ET
Sbjct: 312 KLNRKTGKATVGFTLFGKETLVDLDVKDVVLET 344


>gb|AAF14021.1|AC011436_5 unknown protein [Arabidopsis thaliana]
          Length = 332

 Score =  277 bits (709), Expect = 2e-72
 Identities = 148/278 (53%), Positives = 181/278 (65%), Gaps = 7/278 (2%)
 Frame = -2

Query: 817 YNWXXXXXXXXXXKPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFLA 638
           Y+W          KP KR+A W +ELNLD LA+ G QWW VRVSR+ GHETA  LAR LA
Sbjct: 60  YSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALA 119

Query: 637 RNHPVVEFKVYAPAVHVKRTLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGG 458
           R  P +EF VYAP+V VKR LKNG+ISVKPKPVFPGCIF+ C+LNKE+HD IR+ DG+GG
Sbjct: 120 RQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGG 179

Query: 457 FIGSKVGNTKKQINRPRPVSTEDIEAIFRQAKEEQEKADQAFDEEQRSE---GILKNEEI 287
           FIGSKVGNTK+QIN+PRPV   D+EAIF+QAKE QEKAD  F+E  R+E    IL ++E+
Sbjct: 180 FIGSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEASILASQEL 239

Query: 286 ----NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXTGADDKLLXXXXXXXXXXXXXSE 119
               NSD IETV  +                        A  K L             +E
Sbjct: 240 LALSNSDVIETVAESKPKRAPRKATLATETK--------AKKKKLAAGSTVRVLSGTFAE 291

Query: 118 FKGSLKKLDPASGKATVGFMLFGKESFVDLDMNQIVAE 5
           F G+LKKL+  + KATVGF LFGKE+ V++D+N++V E
Sbjct: 292 FVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 329


>ref|NP_566346.1| plastid transcriptionally active 13 [Arabidopsis thaliana]
           gi|15146210|gb|AAK83588.1| AT3g09210/F3L24_8
           [Arabidopsis thaliana] gi|22136582|gb|AAM91077.1|
           AT3g09210/F3L24_8 [Arabidopsis thaliana]
           gi|332641217|gb|AEE74738.1| plastid transcriptionally
           active 13 [Arabidopsis thaliana]
          Length = 333

 Score =  277 bits (709), Expect = 2e-72
 Identities = 148/278 (53%), Positives = 181/278 (65%), Gaps = 7/278 (2%)
 Frame = -2

Query: 817 YNWXXXXXXXXXXKPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFLA 638
           Y+W          KP KR+A W +ELNLD LA+ G QWW VRVSR+ GHETA  LAR LA
Sbjct: 61  YSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALA 120

Query: 637 RNHPVVEFKVYAPAVHVKRTLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGG 458
           R  P +EF VYAP+V VKR LKNG+ISVKPKPVFPGCIF+ C+LNKE+HD IR+ DG+GG
Sbjct: 121 RQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGG 180

Query: 457 FIGSKVGNTKKQINRPRPVSTEDIEAIFRQAKEEQEKADQAFDEEQRSE---GILKNEEI 287
           FIGSKVGNTK+QIN+PRPV   D+EAIF+QAKE QEKAD  F+E  R+E    IL ++E+
Sbjct: 181 FIGSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEASILASQEL 240

Query: 286 ----NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXTGADDKLLXXXXXXXXXXXXXSE 119
               NSD IETV  +                        A  K L             +E
Sbjct: 241 LALSNSDVIETVAESKPKRAPRKATLATETK--------AKKKKLAAGSTVRVLSGTFAE 292

Query: 118 FKGSLKKLDPASGKATVGFMLFGKESFVDLDMNQIVAE 5
           F G+LKKL+  + KATVGF LFGKE+ V++D+N++V E
Sbjct: 293 FVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330


>gb|AAM65289.1| unknown [Arabidopsis thaliana]
          Length = 333

 Score =  274 bits (700), Expect = 3e-71
 Identities = 147/278 (52%), Positives = 180/278 (64%), Gaps = 7/278 (2%)
 Frame = -2

Query: 817 YNWXXXXXXXXXXKPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFLA 638
           Y+W          KP KR+A W +ELNLD LA+ G QWW VRVSR+ GHETA  LAR LA
Sbjct: 61  YSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALA 120

Query: 637 RNHPVVEFKVYAPAVHVKRTLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGG 458
           R  P +EF VYAP+V VKR LKNG+ISVKPKPVFPGCIF+ C+LNKE+HD IR+ DG+GG
Sbjct: 121 RQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGG 180

Query: 457 FIGSKVGNTKKQINRPRPVSTEDIEAIFRQAKEEQEKADQAFDEEQRSE---GILKNEEI 287
           FI SKVGNTK+QIN+PRPV   D+EAIF+QAKE QEKAD  F+E  R+E    IL ++E+
Sbjct: 181 FIVSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEASILASQEL 240

Query: 286 ----NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXTGADDKLLXXXXXXXXXXXXXSE 119
               NSD IETV  +                        A  K L             +E
Sbjct: 241 LALSNSDVIETVAESKPKRAPRKATLATETK--------AKKKKLAAGSTVRVLSGTFAE 292

Query: 118 FKGSLKKLDPASGKATVGFMLFGKESFVDLDMNQIVAE 5
           F G+LKKL+  + KATVGF LFGKE+ V++D+N++V E
Sbjct: 293 FVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330