BLASTX nr result

ID: Coptis23_contig00012844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012844
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283128.1| PREDICTED: uncharacterized protein LOC100257...   144   7e-33
ref|XP_002313640.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_003539990.1| PREDICTED: uncharacterized protein LOC100805...   128   4e-28
ref|XP_003527348.1| PREDICTED: uncharacterized protein LOC100808...   127   9e-28
ref|NP_172123.1| Plant Tudor-like protein [Arabidopsis thaliana]...   123   1e-26

>ref|XP_002283128.1| PREDICTED: uncharacterized protein LOC100257263 [Vitis vinifera]
          Length = 160

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/121 (57%), Positives = 94/121 (77%), Gaps = 2/121 (1%)
 Frame = +3

Query: 108 VEVHSKEEGYVGSYYAAIVVMRLDRNQYVVEYKTLVTDDEKHQ-LQEIVHASEIRPTPPE 284
           VEV SKE+G++GSYY A V+ ++ RN+ +VEYKTL++D++  Q L+EIV A+E+RP PP 
Sbjct: 34  VEVCSKEDGFLGSYYEAKVLGKVGRNKLMVEYKTLLSDEDGQQPLKEIVEAAEVRPVPPV 93

Query: 285 VKVCDFRPLDKVDAYDNEGWWVGRIVGR-TSNQYHVYFQSSDEKLAYPVDRLRVHQEWKN 461
           + V  F  LD VDA+DN+GWWVGRI G     +Y VYF+SS ++LAYP+ RLRVHQEW++
Sbjct: 94  ILVTGFEVLDTVDAFDNDGWWVGRISGSYEDGKYFVYFESSGDELAYPIHRLRVHQEWED 153

Query: 462 G 464
           G
Sbjct: 154 G 154


>ref|XP_002313640.1| predicted protein [Populus trichocarpa] gi|222850048|gb|EEE87595.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/129 (47%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
 Frame = +3

Query: 84  MAFKRGDLVEVHSKEEGYVGSYYAAIVVMRLDRNQYVVEYKTLVTDDEKHQLQ-EIVHAS 260
           M F  GD VEV SK+EG++GSYY A VV +LD N + V+Y  LV +++  +L  E V A 
Sbjct: 1   MEFHEGDKVEVCSKQEGFLGSYYTATVVKKLDLNSFAVQYTNLVEEEDMSKLLIETVSAD 60

Query: 261 EIRPTPPEVKV-CDFRPLDKVDAYDNEGWWVGRIVGRTSNQYHVYFQSSDEKLAYPVDRL 437
           E+RP PP +K    F   DKVDA+DN+GWW G++ G+    Y VYF+++ +++ Y V RL
Sbjct: 61  EVRPVPPRIKFGSGFSAFDKVDAFDNDGWWAGKVTGQRGPLYFVYFETTGDEIGYHVSRL 120

Query: 438 RVHQEWKNG 464
           R+H +W NG
Sbjct: 121 RIHLDWANG 129


>ref|XP_003539990.1| PREDICTED: uncharacterized protein LOC100805066 [Glycine max]
          Length = 142

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
 Frame = +3

Query: 90  FKRGDLVEVHSKEEGYVGSYYAAIVVMRLDRNQYVVEYKTLVTDDEKHQ-LQEIVHASEI 266
           F RGD VE+ S EEG++GSYY A VV RLD   YVV Y TL+ DD   Q L E +   E+
Sbjct: 10  FSRGDKVEICSNEEGFLGSYYPATVVSRLDNGLYVVRYDTLLEDDASFQPLTETLFPKEL 69

Query: 267 RPTPPEVKVCDFRPLDKVDAYDNEGWWVGRIVGRTSNQ-YHVYFQSSDEKLAYPVDRLRV 443
           RP PP V    F     VDA+DN+GWW+G+I G+   + Y+VYF +++E++AY V  +RV
Sbjct: 70  RPHPPRVPRTHFALHQCVDAFDNDGWWLGQITGKKDGEHYYVYFSTTNEEIAYHVSGIRV 129

Query: 444 HQEWKNG 464
           H EW +G
Sbjct: 130 HHEWSHG 136


>ref|XP_003527348.1| PREDICTED: uncharacterized protein LOC100808474 [Glycine max]
          Length = 142

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/127 (47%), Positives = 82/127 (64%), Gaps = 2/127 (1%)
 Frame = +3

Query: 90  FKRGDLVEVHSKEEGYVGSYYAAIVVMRLDRNQYVVEYKTLVTDDEKHQ-LQEIVHASEI 266
           F R D VE+   E+G++GSYY A VV RLD   YVV Y TL+ DD   Q L E +   E+
Sbjct: 10  FARDDKVEICGNEDGFLGSYYQATVVSRLDNGLYVVRYDTLLEDDASQQPLTETLFPKEL 69

Query: 267 RPTPPEVKVCDFRPLDKVDAYDNEGWWVGRIVG-RTSNQYHVYFQSSDEKLAYPVDRLRV 443
           RP PP V   DF     VDA+DN+GWW+G++ G + +  Y+VYF +++E++AY V  +RV
Sbjct: 70  RPQPPRVSKTDFALYQCVDAFDNDGWWLGQVTGKKDAEHYYVYFSTTNEEIAYHVSAIRV 129

Query: 444 HQEWKNG 464
           H EW +G
Sbjct: 130 HHEWSHG 136


>ref|NP_172123.1| Plant Tudor-like protein [Arabidopsis thaliana]
           gi|8927671|gb|AAF82162.1|AC068143_4 Contains similarity
           to a hypothetical protein T31J12.4 gi|4337176 from
           Arabidopsis thaliana BAC T31J12 gb|AC006416 [Arabidopsis
           thaliana] gi|149944367|gb|ABR46226.1| At1g06340
           [Arabidopsis thaliana] gi|332189855|gb|AEE27976.1| Plant
           Tudor-like protein [Arabidopsis thaliana]
          Length = 134

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 2/129 (1%)
 Frame = +3

Query: 84  MAFKRGDLVEVHSKEEGYVGSYYAAIVVMRLDRNQYV-VEYKTLVTD-DEKHQLQEIVHA 257
           M F +GD VEV SKE+G++GSY+ A VV +     Y  ++YK LV+D D+  +L E++ A
Sbjct: 1   MEFVKGDQVEVCSKEDGFLGSYFGATVVSKTPEGSYYKIKYKNLVSDTDQSKRLVEVISA 60

Query: 258 SEIRPTPPEVKVCDFRPLDKVDAYDNEGWWVGRIVGRTSNQYHVYFQSSDEKLAYPVDRL 437
            E+RP PP+      R  DKVDA+D +GWWVG +     N Y VYF ++DE+L YP+  L
Sbjct: 61  DELRPMPPKSLHVLIRCGDKVDAFDKDGWWVGEVTAVRRNIYSVYFSTTDEELEYPLYSL 120

Query: 438 RVHQEWKNG 464
           R H EW NG
Sbjct: 121 RKHHEWVNG 129


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