BLASTX nr result

ID: Coptis23_contig00012834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012834
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACA66247.1| cold-induced plasma membrane protein [Musa ABB Gr...    61   1e-13
ref|XP_002329990.1| stress-induced hydrophobic peptide [Populus ...    59   2e-12
ref|XP_003536025.1| PREDICTED: hydrophobic protein LTI6A-like [G...    55   2e-12
gb|ACU14681.1| unknown [Glycine max]                                   55   2e-12
ref|XP_003555775.1| PREDICTED: uncharacterized protein LOC100306...    55   2e-12

>gb|ACA66247.1| cold-induced plasma membrane protein [Musa ABB Group]
          Length = 57

 Score = 60.8 bits (146), Expect(2) = 1e-13
 Identities = 26/31 (83%), Positives = 30/31 (96%)
 Frame = +1

Query: 124 MVDQGTANCVDILLAIILPPLGVFLKFGCQV 216
           M D+GTANC+DILLAIILPPLGVFLKFGC++
Sbjct: 1   MADKGTANCIDILLAIILPPLGVFLKFGCEM 31



 Score = 40.4 bits (93), Expect(2) = 1e-13
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = +2

Query: 278 LKFGCQVEFWICLILTLF 331
           LKFGC++EFWICL+LTLF
Sbjct: 25  LKFGCEMEFWICLLLTLF 42


>ref|XP_002329990.1| stress-induced hydrophobic peptide [Populus trichocarpa]
           gi|222871415|gb|EEF08546.1| stress-induced hydrophobic
           peptide [Populus trichocarpa]
          Length = 57

 Score = 58.5 bits (140), Expect(2) = 2e-12
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = +1

Query: 124 MVDQGTANCVDILLAIILPPLGVFLKFGCQV 216
           M D+GTA C+DILLAIILPPLGVFLKFGC V
Sbjct: 1   MADEGTATCIDILLAIILPPLGVFLKFGCGV 31



 Score = 38.5 bits (88), Expect(2) = 2e-12
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +2

Query: 278 LKFGCQVEFWICLILTLF 331
           LKFGC VEFWICL+LT F
Sbjct: 25  LKFGCGVEFWICLLLTFF 42


>ref|XP_003536025.1| PREDICTED: hydrophobic protein LTI6A-like [Glycine max]
          Length = 57

 Score = 54.7 bits (130), Expect(2) = 2e-12
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = +1

Query: 124 MVDQGTANCVDILLAIILPPLGVFLKFGCQV 216
           M   G A C+DILLAIILPPLGVFLK+GCQV
Sbjct: 1   MAGDGAATCIDILLAIILPPLGVFLKYGCQV 31



 Score = 42.0 bits (97), Expect(2) = 2e-12
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +2

Query: 278 LKFGCQVEFWICLILTLF 331
           LK+GCQVEFWICL+LTLF
Sbjct: 25  LKYGCQVEFWICLVLTLF 42


>gb|ACU14681.1| unknown [Glycine max]
          Length = 57

 Score = 54.7 bits (130), Expect(2) = 2e-12
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = +1

Query: 124 MVDQGTANCVDILLAIILPPLGVFLKFGCQV 216
           M   G A C+DILLAIILPPLGVFLK+GCQV
Sbjct: 1   MAGDGAATCIDILLAIILPPLGVFLKYGCQV 31



 Score = 42.0 bits (97), Expect(2) = 2e-12
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +2

Query: 278 LKFGCQVEFWICLILTLF 331
           LK+GCQVEFWICL+LTLF
Sbjct: 25  LKYGCQVEFWICLVLTLF 42


>ref|XP_003555775.1| PREDICTED: uncharacterized protein LOC100306281 [Glycine max]
           gi|255628093|gb|ACU14391.1| unknown [Glycine max]
          Length = 57

 Score = 54.7 bits (130), Expect(2) = 2e-12
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = +1

Query: 124 MVDQGTANCVDILLAIILPPLGVFLKFGCQV 216
           M   G A C+DILLAIILPPLGVFLK+GCQV
Sbjct: 1   MAGDGAATCIDILLAIILPPLGVFLKYGCQV 31



 Score = 42.0 bits (97), Expect(2) = 2e-12
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +2

Query: 278 LKFGCQVEFWICLILTLF 331
           LK+GCQVEFWICL+LTLF
Sbjct: 25  LKYGCQVEFWICLVLTLF 42


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