BLASTX nr result
ID: Coptis23_contig00012834
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00012834 (396 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACA66247.1| cold-induced plasma membrane protein [Musa ABB Gr... 61 1e-13 ref|XP_002329990.1| stress-induced hydrophobic peptide [Populus ... 59 2e-12 ref|XP_003536025.1| PREDICTED: hydrophobic protein LTI6A-like [G... 55 2e-12 gb|ACU14681.1| unknown [Glycine max] 55 2e-12 ref|XP_003555775.1| PREDICTED: uncharacterized protein LOC100306... 55 2e-12 >gb|ACA66247.1| cold-induced plasma membrane protein [Musa ABB Group] Length = 57 Score = 60.8 bits (146), Expect(2) = 1e-13 Identities = 26/31 (83%), Positives = 30/31 (96%) Frame = +1 Query: 124 MVDQGTANCVDILLAIILPPLGVFLKFGCQV 216 M D+GTANC+DILLAIILPPLGVFLKFGC++ Sbjct: 1 MADKGTANCIDILLAIILPPLGVFLKFGCEM 31 Score = 40.4 bits (93), Expect(2) = 1e-13 Identities = 15/18 (83%), Positives = 18/18 (100%) Frame = +2 Query: 278 LKFGCQVEFWICLILTLF 331 LKFGC++EFWICL+LTLF Sbjct: 25 LKFGCEMEFWICLLLTLF 42 >ref|XP_002329990.1| stress-induced hydrophobic peptide [Populus trichocarpa] gi|222871415|gb|EEF08546.1| stress-induced hydrophobic peptide [Populus trichocarpa] Length = 57 Score = 58.5 bits (140), Expect(2) = 2e-12 Identities = 26/31 (83%), Positives = 28/31 (90%) Frame = +1 Query: 124 MVDQGTANCVDILLAIILPPLGVFLKFGCQV 216 M D+GTA C+DILLAIILPPLGVFLKFGC V Sbjct: 1 MADEGTATCIDILLAIILPPLGVFLKFGCGV 31 Score = 38.5 bits (88), Expect(2) = 2e-12 Identities = 15/18 (83%), Positives = 16/18 (88%) Frame = +2 Query: 278 LKFGCQVEFWICLILTLF 331 LKFGC VEFWICL+LT F Sbjct: 25 LKFGCGVEFWICLLLTFF 42 >ref|XP_003536025.1| PREDICTED: hydrophobic protein LTI6A-like [Glycine max] Length = 57 Score = 54.7 bits (130), Expect(2) = 2e-12 Identities = 24/31 (77%), Positives = 26/31 (83%) Frame = +1 Query: 124 MVDQGTANCVDILLAIILPPLGVFLKFGCQV 216 M G A C+DILLAIILPPLGVFLK+GCQV Sbjct: 1 MAGDGAATCIDILLAIILPPLGVFLKYGCQV 31 Score = 42.0 bits (97), Expect(2) = 2e-12 Identities = 16/18 (88%), Positives = 18/18 (100%) Frame = +2 Query: 278 LKFGCQVEFWICLILTLF 331 LK+GCQVEFWICL+LTLF Sbjct: 25 LKYGCQVEFWICLVLTLF 42 >gb|ACU14681.1| unknown [Glycine max] Length = 57 Score = 54.7 bits (130), Expect(2) = 2e-12 Identities = 24/31 (77%), Positives = 26/31 (83%) Frame = +1 Query: 124 MVDQGTANCVDILLAIILPPLGVFLKFGCQV 216 M G A C+DILLAIILPPLGVFLK+GCQV Sbjct: 1 MAGDGAATCIDILLAIILPPLGVFLKYGCQV 31 Score = 42.0 bits (97), Expect(2) = 2e-12 Identities = 16/18 (88%), Positives = 18/18 (100%) Frame = +2 Query: 278 LKFGCQVEFWICLILTLF 331 LK+GCQVEFWICL+LTLF Sbjct: 25 LKYGCQVEFWICLVLTLF 42 >ref|XP_003555775.1| PREDICTED: uncharacterized protein LOC100306281 [Glycine max] gi|255628093|gb|ACU14391.1| unknown [Glycine max] Length = 57 Score = 54.7 bits (130), Expect(2) = 2e-12 Identities = 24/31 (77%), Positives = 26/31 (83%) Frame = +1 Query: 124 MVDQGTANCVDILLAIILPPLGVFLKFGCQV 216 M G A C+DILLAIILPPLGVFLK+GCQV Sbjct: 1 MAGDGAATCIDILLAIILPPLGVFLKYGCQV 31 Score = 42.0 bits (97), Expect(2) = 2e-12 Identities = 16/18 (88%), Positives = 18/18 (100%) Frame = +2 Query: 278 LKFGCQVEFWICLILTLF 331 LK+GCQVEFWICL+LTLF Sbjct: 25 LKYGCQVEFWICLVLTLF 42