BLASTX nr result

ID: Coptis23_contig00012833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012833
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19209.3| unnamed protein product [Vitis vinifera]               85   2e-14
ref|XP_002285734.1| PREDICTED: uncharacterized protein LOC100254...    85   2e-14
emb|CAN61578.1| hypothetical protein VITISV_008031 [Vitis vinifera]    84   3e-14
gb|AAK20904.1| plastid-targeted protein 3 [Craterostigma plantag...    82   1e-13
gb|AAK27717.1|AF356001_1 PTP-1 [Craterostigma plantagineum]            80   4e-13

>emb|CBI19209.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 39/87 (44%), Positives = 62/87 (71%)
 Frame = -2

Query: 659 NWMLLTIIPMILPFFKSKWGPLLALKNKFDSTLQTIECVSEIIEEVAVKVDKIADDITDD 480
           NW++  ++ M++P +K K GPLL LKN+ ++ + T E ++E IE VA KV+++ADDI + 
Sbjct: 92  NWIIGMLLSMVVPLWKYKLGPLLQLKNEVETAMNTTEQIAETIESVAEKVEQVADDIGNH 151

Query: 479 LPDGSKLKQVIERIDEVAEGLIKGADL 399
           LP+G KL+QV + ++ VA+   KGA L
Sbjct: 152 LPEGGKLRQVADFVENVAKETAKGAHL 178


>ref|XP_002285734.1| PREDICTED: uncharacterized protein LOC100254028 [Vitis vinifera]
          Length = 224

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 39/87 (44%), Positives = 62/87 (71%)
 Frame = -2

Query: 659 NWMLLTIIPMILPFFKSKWGPLLALKNKFDSTLQTIECVSEIIEEVAVKVDKIADDITDD 480
           NW++  ++ M++P +K K GPLL LKN+ ++ + T E ++E IE VA KV+++ADDI + 
Sbjct: 97  NWIIGMLLSMVVPLWKYKLGPLLQLKNEVETAMNTTEQIAETIESVAEKVEQVADDIGNH 156

Query: 479 LPDGSKLKQVIERIDEVAEGLIKGADL 399
           LP+G KL+QV + ++ VA+   KGA L
Sbjct: 157 LPEGGKLRQVADFVENVAKETAKGAHL 183


>emb|CAN61578.1| hypothetical protein VITISV_008031 [Vitis vinifera]
          Length = 228

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 39/87 (44%), Positives = 62/87 (71%)
 Frame = -2

Query: 659 NWMLLTIIPMILPFFKSKWGPLLALKNKFDSTLQTIECVSEIIEEVAVKVDKIADDITDD 480
           NW++  ++ M++P +K K GPLL LKN+ ++ + T E ++E IE VA KV+++ADDI + 
Sbjct: 101 NWIIGMLLSMVVPLWKYKLGPLLQLKNEVETXMBTTEQIAETIESVAEKVEQVADDIGNH 160

Query: 479 LPDGSKLKQVIERIDEVAEGLIKGADL 399
           LP+G KL+QV + ++ VA+   KGA L
Sbjct: 161 LPEGGKLRQVADFVENVAKETAKGAHL 187


>gb|AAK20904.1| plastid-targeted protein 3 [Craterostigma plantagineum]
          Length = 200

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 40/86 (46%), Positives = 63/86 (73%)
 Frame = -2

Query: 659 NWMLLTIIPMILPFFKSKWGPLLALKNKFDSTLQTIECVSEIIEEVAVKVDKIADDITDD 480
           NW++  I+ +I+PFF +K G L  L N+ ++T+Q +E ++E +EEVA K DKIA++I  D
Sbjct: 83  NWIIGFIVSVIIPFFANKLGRLGFLLNRIENTVQQVEDIAEAVEEVAKKADKIAEEIGHD 142

Query: 479 LPDGSKLKQVIERIDEVAEGLIKGAD 402
           LP+G KLK ++E +++VAE + K AD
Sbjct: 143 LPEG-KLKNLVEAVEDVAERVAKDAD 167


>gb|AAK27717.1|AF356001_1 PTP-1 [Craterostigma plantagineum]
          Length = 200

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 39/86 (45%), Positives = 62/86 (72%)
 Frame = -2

Query: 659 NWMLLTIIPMILPFFKSKWGPLLALKNKFDSTLQTIECVSEIIEEVAVKVDKIADDITDD 480
           NW++  I+ +I+PFF +K G L  L N+ ++ +Q +E ++E +EEVA K DKIA++I  D
Sbjct: 83  NWIIGFIVSVIIPFFANKLGRLGFLLNRIENAVQQVEDIAEAVEEVAKKADKIAEEIGHD 142

Query: 479 LPDGSKLKQVIERIDEVAEGLIKGAD 402
           LP+G KLK ++E +++VAE + K AD
Sbjct: 143 LPEG-KLKNLVEAVEDVAERVAKDAD 167


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