BLASTX nr result

ID: Coptis23_contig00012822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012822
         (1271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141667.1| PREDICTED: clavaminate synthase-like protein...   508   e-141
emb|CBI36054.3| unnamed protein product [Vitis vinifera]              504   e-140
ref|XP_002283642.1| PREDICTED: clavaminate synthase-like protein...   504   e-140
ref|XP_002298245.1| predicted protein [Populus trichocarpa] gi|2...   503   e-140
ref|XP_002883301.1| predicted protein [Arabidopsis lyrata subsp....   500   e-139

>ref|XP_004141667.1| PREDICTED: clavaminate synthase-like protein At3g21360-like [Cucumis
            sativus]
          Length = 324

 Score =  508 bits (1308), Expect = e-141
 Identities = 242/328 (73%), Positives = 286/328 (87%)
 Frame = +3

Query: 39   MSVENLGFTELIKLTYQKNYNGNNFPSIITPKTSNRFNLSTFCETITNQKQWLESLLHSS 218
            M+VENL     I++ +QK+Y  + FP +++P +++ F +S+F + I  QK  ++SL+ +S
Sbjct: 1    MAVENL---MEIQIPHQKHYPASYFPLVLSPSSAS-FAVSSFAQAIKAQKSTIDSLILNS 56

Query: 219  GALLLRGFPVKTASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDKIIPFHH 398
            GA+L RGFPV+ ASDFN VVEAFGYEE PYVGGAAPR+ V+GRVFTANESPPD+ IPFHH
Sbjct: 57   GAILFRGFPVEAASDFNDVVEAFGYEEFPYVGGAAPRSKVVGRVFTANESPPDQKIPFHH 116

Query: 399  EMAQVPEFPSKLFFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVL 578
            E+AQVPEFP+KLFF+CE EPR+GGETPIVLSHV+YER+KE+YP+FVE+LE  GLIYTRVL
Sbjct: 117  ELAQVPEFPAKLFFYCEVEPRSGGETPIVLSHVVYERVKEKYPEFVERLEEQGLIYTRVL 176

Query: 579  GAGDDPSSPIGCGWQSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKRR 758
            G  DDPSSPIG GW+STFLT +K+IAEERAA+LGMKLEW KDGVKT+MGPIPA+K+DK R
Sbjct: 177  GEDDDPSSPIGRGWKSTFLTHDKSIAEERAAKLGMKLEWLKDGVKTVMGPIPAIKHDKVR 236

Query: 759  GRKVWFNSMVAAYTGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLEEECVAIPWQKGD 938
             RK+WFNSMVAAYTGW+D RNDPVKAVTFGDGTPLPADIIY CL +LEEE VAIPWQKGD
Sbjct: 237  QRKIWFNSMVAAYTGWEDARNDPVKAVTFGDGTPLPADIIYGCLRILEEESVAIPWQKGD 296

Query: 939  ILLIDNWAALHSRRPFEPPRRILASLCK 1022
            ILLIDNWA LHSRRPF PPRRILASLC+
Sbjct: 297  ILLIDNWAVLHSRRPFLPPRRILASLCR 324


>emb|CBI36054.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  504 bits (1298), Expect = e-140
 Identities = 235/316 (74%), Positives = 274/316 (86%), Gaps = 1/316 (0%)
 Frame = +3

Query: 78   LTYQKNYNGNNFPSIITP-KTSNRFNLSTFCETITNQKQWLESLLHSSGALLLRGFPVKT 254
            + +QK Y+G  FP ++TP + +    LS   ++I   K WL+SLLH +GA+LLR FPV T
Sbjct: 40   IPHQKLYSGAPFPLVLTPGQGAQSLGLSHLTQSIKAHKPWLQSLLHRAGAVLLRDFPVTT 99

Query: 255  ASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDKIIPFHHEMAQVPEFPSKL 434
            ASDFN VVEAFG+ ELPYVGGAAPRT V+GRVFT+NESPPD+ IPFHHEMAQVPEFPSKL
Sbjct: 100  ASDFNDVVEAFGFAELPYVGGAAPRTKVVGRVFTSNESPPDQKIPFHHEMAQVPEFPSKL 159

Query: 435  FFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDDPSSPIGC 614
            FFFCE EP TGGETPIVLSH++YERMK +YP+FV++LE  GL+YTRVLG  DDPSSPIG 
Sbjct: 160  FFFCEVEPGTGGETPIVLSHIVYERMKAKYPEFVQRLEERGLMYTRVLGEDDDPSSPIGR 219

Query: 615  GWQSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKRRGRKVWFNSMVAA 794
            GW+STFLT++K  AE+RAA+LGMKLEW +DGVKTIMGPIPAVKYD+ R RK+WFNSMVAA
Sbjct: 220  GWKSTFLTQDKTTAEKRAAQLGMKLEWMEDGVKTIMGPIPAVKYDESRQRKIWFNSMVAA 279

Query: 795  YTGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLEEECVAIPWQKGDILLIDNWAALHS 974
            YTGW+D RNDPVKAVTFGDG PLPADIIY CL++LEEECVA+PWQKGD+LL+DNWA LHS
Sbjct: 280  YTGWEDARNDPVKAVTFGDGLPLPADIIYDCLKILEEECVAVPWQKGDVLLLDNWAVLHS 339

Query: 975  RRPFEPPRRILASLCK 1022
            RRPF+PPRR+LASLCK
Sbjct: 340  RRPFDPPRRVLASLCK 355


>ref|XP_002283642.1| PREDICTED: clavaminate synthase-like protein At3g21360 [Vitis
            vinifera]
          Length = 325

 Score =  504 bits (1298), Expect = e-140
 Identities = 235/316 (74%), Positives = 274/316 (86%), Gaps = 1/316 (0%)
 Frame = +3

Query: 78   LTYQKNYNGNNFPSIITP-KTSNRFNLSTFCETITNQKQWLESLLHSSGALLLRGFPVKT 254
            + +QK Y+G  FP ++TP + +    LS   ++I   K WL+SLLH +GA+LLR FPV T
Sbjct: 10   IPHQKLYSGAPFPLVLTPGQGAQSLGLSHLTQSIKAHKPWLQSLLHRAGAVLLRDFPVTT 69

Query: 255  ASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDKIIPFHHEMAQVPEFPSKL 434
            ASDFN VVEAFG+ ELPYVGGAAPRT V+GRVFT+NESPPD+ IPFHHEMAQVPEFPSKL
Sbjct: 70   ASDFNDVVEAFGFAELPYVGGAAPRTKVVGRVFTSNESPPDQKIPFHHEMAQVPEFPSKL 129

Query: 435  FFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDDPSSPIGC 614
            FFFCE EP TGGETPIVLSH++YERMK +YP+FV++LE  GL+YTRVLG  DDPSSPIG 
Sbjct: 130  FFFCEVEPGTGGETPIVLSHIVYERMKAKYPEFVQRLEERGLMYTRVLGEDDDPSSPIGR 189

Query: 615  GWQSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKRRGRKVWFNSMVAA 794
            GW+STFLT++K  AE+RAA+LGMKLEW +DGVKTIMGPIPAVKYD+ R RK+WFNSMVAA
Sbjct: 190  GWKSTFLTQDKTTAEKRAAQLGMKLEWMEDGVKTIMGPIPAVKYDESRQRKIWFNSMVAA 249

Query: 795  YTGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLEEECVAIPWQKGDILLIDNWAALHS 974
            YTGW+D RNDPVKAVTFGDG PLPADIIY CL++LEEECVA+PWQKGD+LL+DNWA LHS
Sbjct: 250  YTGWEDARNDPVKAVTFGDGLPLPADIIYDCLKILEEECVAVPWQKGDVLLLDNWAVLHS 309

Query: 975  RRPFEPPRRILASLCK 1022
            RRPF+PPRR+LASLCK
Sbjct: 310  RRPFDPPRRVLASLCK 325


>ref|XP_002298245.1| predicted protein [Populus trichocarpa] gi|222845503|gb|EEE83050.1|
            predicted protein [Populus trichocarpa]
          Length = 327

 Score =  503 bits (1295), Expect = e-140
 Identities = 238/320 (74%), Positives = 275/320 (85%), Gaps = 3/320 (0%)
 Frame = +3

Query: 72   IKLTYQKNYNGNN---FPSIITPKTSNRFNLSTFCETITNQKQWLESLLHSSGALLLRGF 242
            I++ +QK+Y+      FPS+++P   +   LS F ++I  QK +L+SLL  +GA+L RGF
Sbjct: 8    IQIQHQKHYSNIPSFPFPSVLSPNPFSSSTLSFFTDSIIAQKPFLDSLLLKTGAILFRGF 67

Query: 243  PVKTASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDKIIPFHHEMAQVPEF 422
             V TA DFN VVEAFG+EELPYVGGAAPRTNV+GRVFTANESPPD+ IPFHHEMAQVPEF
Sbjct: 68   DVNTAKDFNDVVEAFGFEELPYVGGAAPRTNVVGRVFTANESPPDQKIPFHHEMAQVPEF 127

Query: 423  PSKLFFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDDPSS 602
            PSKLFFFCE EP +GGETPIVLSHV+YERMKERYPDFVEK+E HGLIYTRVLG  DDPSS
Sbjct: 128  PSKLFFFCEVEPGSGGETPIVLSHVVYERMKERYPDFVEKIEEHGLIYTRVLGEEDDPSS 187

Query: 603  PIGCGWQSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKRRGRKVWFNS 782
            PIG GW+STFLT +K++AE+RAA+LGM LEW +DGVKTIMGPIPA+KYDK R RK+WFNS
Sbjct: 188  PIGRGWKSTFLTNDKSVAEQRAAKLGMTLEWFEDGVKTIMGPIPAIKYDKSRNRKIWFNS 247

Query: 783  MVAAYTGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLEEECVAIPWQKGDILLIDNWA 962
            MVAAYTGWKD RNDPVKAVTFGDG PLP DII+ CL++LEEE +AIPWQKGD+LLIDNWA
Sbjct: 248  MVAAYTGWKDARNDPVKAVTFGDGQPLPGDIIHDCLKILEEESLAIPWQKGDVLLIDNWA 307

Query: 963  ALHSRRPFEPPRRILASLCK 1022
             LH+RR F PPRR+LASLCK
Sbjct: 308  VLHARRSFNPPRRVLASLCK 327


>ref|XP_002883301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329141|gb|EFH59560.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score =  500 bits (1287), Expect = e-139
 Identities = 230/324 (70%), Positives = 277/324 (85%), Gaps = 5/324 (1%)
 Frame = +3

Query: 66   ELIKLTYQKNYNGNNFPSIITPKTSN----RFNLSTFCETITNQKQWLESLLHSSGALLL 233
            E  ++  QK+Y    FP++I+P +S+      +L  F ++I NQK +L+SLLH SG ++ 
Sbjct: 7    EETRIPQQKHYKSKPFPAVISPPSSSIPIPAVSLPLFTQSIKNQKPYLDSLLHESGTVIF 66

Query: 234  RGFPVKTASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDKIIPFHHEMAQV 413
            RGFPV +A DFN VVEAFG++E PYVGGAAPRT+V+GRVFTANESPPD+ IPFHHEMAQV
Sbjct: 67   RGFPVNSAEDFNDVVEAFGFDEFPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQV 126

Query: 414  PEFPSKLFFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDD 593
            PEFPSKLFF+CE EP++GGETPIVLSHV+YERMKE++P+FV++LE HGL+Y RVLG  DD
Sbjct: 127  PEFPSKLFFYCEIEPKSGGETPIVLSHVVYERMKEKHPEFVQRLEEHGLLYVRVLGEDDD 186

Query: 594  PSSPIGCGWQSTFLTKEKNIAEERAARLGMKLEWTKD-GVKTIMGPIPAVKYDKRRGRKV 770
            PSSPIG GW+STFLT +KN+AE+RAA LGMKLEWT+D G KT+MGPIPA+KYD+ R RKV
Sbjct: 187  PSSPIGRGWKSTFLTHDKNLAEQRAANLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRKV 246

Query: 771  WFNSMVAAYTGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLEEECVAIPWQKGDILLI 950
            WFNSMVAAYTGW+D RNDP KAVTFGDG PLP DI++ CL +LEEECVA+PWQ+GD+LLI
Sbjct: 247  WFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPEDIVHDCLRILEEECVAVPWQRGDVLLI 306

Query: 951  DNWAALHSRRPFEPPRRILASLCK 1022
            DNWA LHSRRPFEPPRR+LASLCK
Sbjct: 307  DNWAVLHSRRPFEPPRRVLASLCK 330


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