BLASTX nr result

ID: Coptis23_contig00012783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012783
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268744.1| PREDICTED: mitochondrial zinc maintenance pr...   145   8e-33
ref|XP_004152250.1| PREDICTED: mitochondrial zinc maintenance pr...   143   3e-32
ref|XP_002321008.1| predicted protein [Populus trichocarpa] gi|2...   143   3e-32
ref|NP_001236762.1| uncharacterized protein LOC100305793 [Glycin...   140   2e-31
ref|XP_002523083.1| catalytic, putative [Ricinus communis] gi|22...   139   4e-31

>ref|XP_002268744.1| PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial
           [Vitis vinifera] gi|297743889|emb|CBI36859.3| unnamed
           protein product [Vitis vinifera]
          Length = 105

 Score =  145 bits (365), Expect = 8e-33
 Identities = 72/98 (73%), Positives = 82/98 (83%)
 Frame = +2

Query: 53  MRAYRTLLRATRNSFRGDTLMLKESAVEVRSKFEENRNVTCDKEIEKLLEDAREASHFIT 232
           + AYRTLLRATR SF GDT+MLK SAVE+R  FE+NRNVT   EI+ LLE AREASHFI+
Sbjct: 6   LSAYRTLLRATRKSFAGDTVMLKASAVEIRKHFEDNRNVTSQSEIQGLLESAREASHFIS 65

Query: 233 NMIVQAKLNSSGGYAVKPSQEHAGATLEVPSEEILPKS 346
           NMIVQAKLNS GGY VKPS++HAG TLE+PSE+IL  S
Sbjct: 66  NMIVQAKLNSRGGYEVKPSKDHAGGTLEIPSEDILKSS 103


>ref|XP_004152250.1| PREDICTED: mitochondrial zinc maintenance protein 1,
           mitochondrial-like [Cucumis sativus]
           gi|449531029|ref|XP_004172490.1| PREDICTED:
           mitochondrial zinc maintenance protein 1,
           mitochondrial-like [Cucumis sativus]
          Length = 104

 Score =  143 bits (360), Expect = 3e-32
 Identities = 71/99 (71%), Positives = 86/99 (86%)
 Frame = +2

Query: 50  VMRAYRTLLRATRNSFRGDTLMLKESAVEVRSKFEENRNVTCDKEIEKLLEDAREASHFI 229
           V+ AYR+LLRAT+ SF GDTLML ESA E+R KF+E+R+VT + EI KLLE+AREASHFI
Sbjct: 5   VLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREASHFI 64

Query: 230 TNMIVQAKLNSSGGYAVKPSQEHAGATLEVPSEEILPKS 346
           +NMIVQAKL S GGY +KPS++HAGATLEVP+EE+L KS
Sbjct: 65  SNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 103


>ref|XP_002321008.1| predicted protein [Populus trichocarpa] gi|222861781|gb|EEE99323.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score =  143 bits (360), Expect = 3e-32
 Identities = 72/98 (73%), Positives = 82/98 (83%)
 Frame = +2

Query: 53  MRAYRTLLRATRNSFRGDTLMLKESAVEVRSKFEENRNVTCDKEIEKLLEDAREASHFIT 232
           + AYR LLRATR SF GD+LMLK SA EVR KFEENR+V+ + EI+KLLE+AREASHFI 
Sbjct: 8   LSAYRALLRATRKSFTGDSLMLKASASEVRKKFEENRDVSSETEIQKLLEEAREASHFIA 67

Query: 233 NMIVQAKLNSSGGYAVKPSQEHAGATLEVPSEEILPKS 346
            MIVQAKLN  GGY VKP ++HAGATLE+PSEEIL KS
Sbjct: 68  TMIVQAKLNDRGGYEVKPDKDHAGATLEIPSEEILRKS 105


>ref|NP_001236762.1| uncharacterized protein LOC100305793 [Glycine max]
           gi|255626615|gb|ACU13652.1| unknown [Glycine max]
          Length = 106

 Score =  140 bits (354), Expect = 2e-31
 Identities = 72/100 (72%), Positives = 86/100 (86%), Gaps = 1/100 (1%)
 Frame = +2

Query: 50  VMRAYRTLLRATRNSFRGDTLMLKESAVEVRSKFEENRNVTCDKEIEKLLEDAREASHFI 229
           V+ AYR LL+ATR +F GDT+MLKESAVEVR KFEEN+NV+ + EI+KLL +A EASHFI
Sbjct: 6   VLSAYRALLKATRKTFSGDTMMLKESAVEVRKKFEENKNVSSEAEIQKLLLEAEEASHFI 65

Query: 230 TNMIVQAKLN-SSGGYAVKPSQEHAGATLEVPSEEILPKS 346
           TNM+VQA+LN  SG YAVKP +EHAGATLE+PSEEI+ KS
Sbjct: 66  TNMLVQAQLNPDSGTYAVKPCKEHAGATLELPSEEIIRKS 105


>ref|XP_002523083.1| catalytic, putative [Ricinus communis] gi|223537645|gb|EEF39268.1|
           catalytic, putative [Ricinus communis]
          Length = 105

 Score =  139 bits (351), Expect = 4e-31
 Identities = 72/98 (73%), Positives = 81/98 (82%)
 Frame = +2

Query: 53  MRAYRTLLRATRNSFRGDTLMLKESAVEVRSKFEENRNVTCDKEIEKLLEDAREASHFIT 232
           + AYR+LLRATR SF GDT+ML  SA EVR KFEENR+VT D +I+KLLE+AREAS FI+
Sbjct: 7   LTAYRSLLRATRKSFAGDTMMLNASASEVRKKFEENRHVTSDTQIQKLLEEAREASEFIS 66

Query: 233 NMIVQAKLNSSGGYAVKPSQEHAGATLEVPSEEILPKS 346
            MIVQAKLN  GGY VK  +EHAGATLEVPSEEIL KS
Sbjct: 67  TMIVQAKLNDRGGYEVKLDKEHAGATLEVPSEEILKKS 104


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