BLASTX nr result

ID: Coptis23_contig00012782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012782
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA70870.1| putative inward rectifying potassium channel [So...    79   5e-13
gb|ACB56631.1| K+ channel protein [Populus euphratica]                 77   2e-12
emb|CBI23771.3| unnamed protein product [Vitis vinifera]               77   3e-12
ref|XP_002268924.1| PREDICTED: potassium channel AKT2/3-like [Vi...    77   3e-12
emb|CAC05489.1| potassium channel 2 [Populus tremula x Populus t...    74   3e-11

>emb|CAA70870.1| putative inward rectifying potassium channel [Solanum tuberosum]
          Length = 845

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/64 (59%), Positives = 50/64 (78%)
 Frame = +1

Query: 13  TKMFEFL*WQHYREFKDLRIAALLVDNGEDGGDPNIALNLLAIANTGNAAFLDELLKVRL 192
           T M  FL  QH+++ KDLR+  L +D G++  DPN+++NLL +A+TGNAAFLDELLK RL
Sbjct: 519 TMMKNFL--QHHKKLKDLRLTDLFLDVGDEDSDPNMSINLLTVASTGNAAFLDELLKARL 576

Query: 193 DPNI 204
           DPNI
Sbjct: 577 DPNI 580


>gb|ACB56631.1| K+ channel protein [Populus euphratica]
          Length = 831

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = +1

Query: 40  QHYREFKDLRIAALLVDNGEDGGDPNIALNLLAIANTGNAAFLDELLKVRLDPNI 204
           QHY+  KDL+I  L V+NGE+  DPN+A NLLA A+TGNAAFL+ELLK +LDP+I
Sbjct: 501 QHYKGLKDLKIGDLTVENGEEDDDPNMASNLLATASTGNAAFLEELLKAKLDPDI 555


>emb|CBI23771.3| unnamed protein product [Vitis vinifera]
          Length = 805

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/55 (63%), Positives = 45/55 (81%)
 Frame = +1

Query: 40  QHYREFKDLRIAALLVDNGEDGGDPNIALNLLAIANTGNAAFLDELLKVRLDPNI 204
           QH++  KDL I  LLV+NGE+  +PN+A NLL +A+TGNAAFLDELLK +LDP+I
Sbjct: 516 QHHKRLKDLNIGDLLVENGEEDVNPNMAFNLLTVASTGNAAFLDELLKAKLDPDI 570


>ref|XP_002268924.1| PREDICTED: potassium channel AKT2/3-like [Vitis vinifera]
          Length = 841

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/55 (63%), Positives = 45/55 (81%)
 Frame = +1

Query: 40  QHYREFKDLRIAALLVDNGEDGGDPNIALNLLAIANTGNAAFLDELLKVRLDPNI 204
           QH++  KDL I  LLV+NGE+  +PN+A NLL +A+TGNAAFLDELLK +LDP+I
Sbjct: 518 QHHKRLKDLNIGDLLVENGEEDVNPNMAFNLLTVASTGNAAFLDELLKAKLDPDI 572


>emb|CAC05489.1| potassium channel 2 [Populus tremula x Populus tremuloides]
          Length = 830

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/66 (54%), Positives = 48/66 (72%)
 Frame = +1

Query: 7   YTTKMFEFL*WQHYREFKDLRIAALLVDNGEDGGDPNIALNLLAIANTGNAAFLDELLKV 186
           Y   M  FL  QHY+  K L+I  L V+NGE+  +PN+A NLLA A+TGNAAFL+ELL+ 
Sbjct: 491 YVAIMKNFL--QHYKRLKGLKIGDLTVENGEEEDEPNMAFNLLATASTGNAAFLEELLRA 548

Query: 187 RLDPNI 204
           +LDP++
Sbjct: 549 KLDPDV 554


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