BLASTX nr result

ID: Coptis23_contig00012780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012780
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531878.1| RALFL33, putative [Ricinus communis] gi|2235...   146   2e-33
ref|XP_002321018.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_004172589.1| PREDICTED: protein RALF-like 33-like [Cucumi...   135   5e-30
ref|XP_002330157.1| predicted protein [Populus trichocarpa] gi|1...   135   5e-30
gb|AAO27366.1| rapid alkalinization factor 1 precursor [Populus ...   135   7e-30

>ref|XP_002531878.1| RALFL33, putative [Ricinus communis] gi|223528486|gb|EEF30515.1|
           RALFL33, putative [Ricinus communis]
          Length = 116

 Score =  146 bits (369), Expect = 2e-33
 Identities = 70/111 (63%), Positives = 87/111 (78%), Gaps = 3/111 (2%)
 Frame = -3

Query: 536 MATPSSSFLLVIFTIYMSMFISISTVGASGDHNLSWI---STCKGTIAECEASNEFDMDS 366
           MA  SS FL   + +  S+ IS STV A+ DH L+W+   S C+GT+A+C   +EFDMDS
Sbjct: 1   MAKHSSIFLFTFYLLLSSLIISTSTVEATIDHKLNWVPKTSRCQGTLADCMQEDEFDMDS 60

Query: 365 EINRRILATSQYISYEALKRNSVPCNQRGASYYNCQAGAQANPYNRGCSAI 213
           EINRRILAT+ YISY AL+RN++PC+QRGASYYNCQ GA+ANPY+RGCSAI
Sbjct: 61  EINRRILATTNYISYGALQRNTIPCSQRGASYYNCQPGAEANPYSRGCSAI 111


>ref|XP_002321018.1| predicted protein [Populus trichocarpa] gi|222861791|gb|EEE99333.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  140 bits (354), Expect = 1e-31
 Identities = 65/95 (68%), Positives = 81/95 (85%), Gaps = 4/95 (4%)
 Frame = -3

Query: 485 SMFISISTVGASGDHNLSWIST----CKGTIAECEASNEFDMDSEINRRILATSQYISYE 318
           ++ IS STV AS DHNL+W+ T    C+GT+AEC  ++EF+MDSEINRRILATS YISY+
Sbjct: 6   ALIISSSTVDASEDHNLNWVPTRARGCQGTVAECMGNDEFEMDSEINRRILATSNYISYD 65

Query: 317 ALKRNSVPCNQRGASYYNCQAGAQANPYNRGCSAI 213
           AL +N+VPC+QRGASYYNC+ GA+ANPY+RGCSAI
Sbjct: 66  ALGKNNVPCSQRGASYYNCKTGAEANPYSRGCSAI 100


>ref|XP_004172589.1| PREDICTED: protein RALF-like 33-like [Cucumis sativus]
          Length = 121

 Score =  135 bits (340), Expect = 5e-30
 Identities = 67/109 (61%), Positives = 83/109 (76%), Gaps = 5/109 (4%)
 Frame = -3

Query: 524 SSSFLLVIFTIYMSMFISISTV--GASGDHNLSWI---STCKGTIAECEASNEFDMDSEI 360
           S +F L+   +++    S +TV  G    H+L+WI   STCKG+IAEC    EF+ DSEI
Sbjct: 8   SPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEEFEFDSEI 67

Query: 359 NRRILATSQYISYEALKRNSVPCNQRGASYYNCQAGAQANPYNRGCSAI 213
           NRRILATSQYISY AL+RN+VPC++RGASYYNCQ GAQANPY+RGC+AI
Sbjct: 68  NRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAI 116


>ref|XP_002330157.1| predicted protein [Populus trichocarpa] gi|118484425|gb|ABK94089.1|
           unknown [Populus trichocarpa]
           gi|222871613|gb|EEF08744.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  135 bits (340), Expect = 5e-30
 Identities = 73/116 (62%), Positives = 89/116 (76%), Gaps = 8/116 (6%)
 Frame = -3

Query: 536 MATPSSSFLL-VIFTIYMSMFISISTVGASGDHNLSWI-----STCKGTIAECEASN--E 381
           MA  SS FL+     I M+M +S STV  SGDH+L WI     S CKG+IAEC A +  E
Sbjct: 1   MAKRSSWFLISATILILMAMGLS-STVQGSGDHHLGWIPATRSSVCKGSIAECMAEDGEE 59

Query: 380 FDMDSEINRRILATSQYISYEALKRNSVPCNQRGASYYNCQAGAQANPYNRGCSAI 213
           F+MD+EINRRILAT++Y+SY AL+RN+VPC++RGASYYNCQ GAQANPY+RGCS I
Sbjct: 60  FEMDTEINRRILATTKYVSYGALQRNNVPCSRRGASYYNCQRGAQANPYSRGCSRI 115


>gb|AAO27366.1| rapid alkalinization factor 1 precursor [Populus trichocarpa x
           Populus deltoides]
          Length = 120

 Score =  135 bits (339), Expect = 7e-30
 Identities = 69/111 (62%), Positives = 87/111 (78%), Gaps = 8/111 (7%)
 Frame = -3

Query: 521 SSFLLVIFTIYMSMFISIS-TVGASGDHNLSWI-----STCKGTIAECEASN--EFDMDS 366
           SS+ L+  TI + M + +S TV  SGDH+L WI     S CKG+IAEC A +  EF+MD+
Sbjct: 5   SSWFLISATILILMAMGLSSTVQGSGDHHLGWIPATRSSVCKGSIAECMAEDGEEFEMDT 64

Query: 365 EINRRILATSQYISYEALKRNSVPCNQRGASYYNCQAGAQANPYNRGCSAI 213
           EINRRILAT++Y+SY AL+RN+VPC++RGASYYNCQ GAQANPY+RGCS I
Sbjct: 65  EINRRILATTKYVSYGALQRNNVPCSRRGASYYNCQRGAQANPYSRGCSRI 115


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