BLASTX nr result
ID: Coptis23_contig00012774
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012774
(1910 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271886.1| PREDICTED: retinoblastoma-binding protein 5-... 835 0.0
ref|XP_002522890.1| nucleotide binding protein, putative [Ricinu... 828 0.0
emb|CAN70287.1| hypothetical protein VITISV_003927 [Vitis vinifera] 811 0.0
emb|CBI16678.3| unnamed protein product [Vitis vinifera] 795 0.0
ref|XP_002329452.1| predicted protein [Populus trichocarpa] gi|2... 794 0.0
>ref|XP_002271886.1| PREDICTED: retinoblastoma-binding protein 5-like [Vitis vinifera]
Length = 554
Score = 835 bits (2157), Expect = 0.0
Identities = 419/557 (75%), Positives = 460/557 (82%)
Frame = -1
Query: 1841 MNVSIIDPLQGDFPEIIEEYLEHGVMKCIAFNRRGTLLAAGCSDGTCVIWDFETRGIAKE 1662
MN IIDPLQGDFPE+IEEYLEHGVMKCIAFNRRGTLLAAGC+DG+C+IWDFETRGIAKE
Sbjct: 1 MNAPIIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCADGSCIIWDFETRGIAKE 60
Query: 1661 LRDKDSVCPITCVCWSKYGRHVLVSATDKSLTLWDVVNGEKITRITLQQTTLSARLHPSS 1482
L DKD V IT VCWSK G +LVSA DKSLTLWDVV+GEKITR TLQQT L ARLHP S
Sbjct: 61 LHDKDCVAAITSVCWSKDGHCILVSAADKSLTLWDVVSGEKITRTTLQQTPLQARLHPGS 120
Query: 1481 RVPSVCLACPLSSAPVLVDLNTGSTTVLPVSVSDTGNGVVPALRNKFSDGSPPLTPTAAC 1302
S+CLACPLSSAP++VDLNTGSTTVLPVSVSDTG G+ P RNKFSDGSPP TPTAAC
Sbjct: 121 -AKSLCLACPLSSAPMIVDLNTGSTTVLPVSVSDTGAGLPPPSRNKFSDGSPPFTPTAAC 179
Query: 1301 FNKYGDLIYVGNSKGEILIVDYKNIQVHGIVPVSGGAVIKNIVFSRNGQYLLTNSNDRTI 1122
FNKYGDL+YVGNSKGEILIVD+KN QV +VP+SGG+VIKNIVFSRNGQYLLTNSNDRTI
Sbjct: 180 FNKYGDLVYVGNSKGEILIVDHKNKQVRAVVPISGGSVIKNIVFSRNGQYLLTNSNDRTI 239
Query: 1121 RVYENHLPQKDGPATLDELSRTVDEVHGMEKLKAVGSKCLILSREFQDSINRIHWKTTCF 942
R+YEN LP KDG LDELS + DEV EKLKAVGSKCL L R+FQDSI +IHWK CF
Sbjct: 240 RIYENLLPLKDGLKVLDELSTSCDEVDEAEKLKAVGSKCLALFRDFQDSITKIHWKVPCF 299
Query: 941 SGDGEWVVGASGSKGEHKIYIWDRAGHLVKILEGPKEALMDIAWHXXXXXXXXXXVTGLV 762
SGDGEWVVG S SKGEHKIYIWDRAGHLVKILEGPKEAL+D+AWH +TGLV
Sbjct: 300 SGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVHPIVVSVSLTGLV 359
Query: 761 YIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXEFDLVPDTEKVKESNVNEDEEVDIFTVE 582
YIWAKDYTENWSAFAPDFK EFDL+P+TEKVK+++VNED+EVDI TVE
Sbjct: 360 YIWAKDYTENWSAFAPDFKELEENEEYIEREDEFDLMPETEKVKDTDVNEDDEVDIMTVE 419
Query: 581 KDSAFSDSDMSQEELCFLPAVPCPDSLELQDKYGGSSSKLVDSNHSGSPFSEEAGQNGQP 402
+S FSDSDMSQEELCFLPAVPCPD E QDK GS+SKL DSNHSGSP SEEAGQNGQ
Sbjct: 420 NESVFSDSDMSQEELCFLPAVPCPDVPEQQDKCVGSTSKLTDSNHSGSPLSEEAGQNGQA 479
Query: 401 SNPASSPLEAVGNSMGEDTGLTESSKRRRKPSEKGLELQAEKVRKPIKKIKASGKLSKAK 222
N ASSP+E EDTG T KR+RKPSEKG+ELQAEKVRKP+K +K+SGK+SK K
Sbjct: 480 MNHASSPVE-------EDTGGTR-LKRKRKPSEKGMELQAEKVRKPLKTMKSSGKISKIK 531
Query: 221 NKSMEEQDTSNGEYGDD 171
NK++ EQDT + + DD
Sbjct: 532 NKTVVEQDTDSYVFADD 548
>ref|XP_002522890.1| nucleotide binding protein, putative [Ricinus communis]
gi|223537875|gb|EEF39490.1| nucleotide binding protein,
putative [Ricinus communis]
Length = 551
Score = 828 bits (2138), Expect = 0.0
Identities = 414/557 (74%), Positives = 459/557 (82%)
Frame = -1
Query: 1841 MNVSIIDPLQGDFPEIIEEYLEHGVMKCIAFNRRGTLLAAGCSDGTCVIWDFETRGIAKE 1662
MN SIIDPLQGDFPE+IEEYLEHGVMKCIAFNRRGTLLAAGCSDG+CVIWDFETRGIAKE
Sbjct: 1 MNASIIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKE 60
Query: 1661 LRDKDSVCPITCVCWSKYGRHVLVSATDKSLTLWDVVNGEKITRITLQQTTLSARLHPSS 1482
LRDKD + IT VCWSKYG +LVSA DKSLTLWDVV+GE+I R LQQT L ARLHP S
Sbjct: 61 LRDKDCIAAITSVCWSKYGHRILVSAADKSLTLWDVVSGERIARTILQQTPLLARLHPGS 120
Query: 1481 RVPSVCLACPLSSAPVLVDLNTGSTTVLPVSVSDTGNGVVPALRNKFSDGSPPLTPTAAC 1302
PS+CLAC LSSAP++VDLNTGSTTVLPV V D GNG P RNK SD +PP TPTAAC
Sbjct: 121 SAPSLCLACSLSSAPMIVDLNTGSTTVLPVMVPDMGNGHAPPSRNKSSDANPPFTPTAAC 180
Query: 1301 FNKYGDLIYVGNSKGEILIVDYKNIQVHGIVPVSGGAVIKNIVFSRNGQYLLTNSNDRTI 1122
FNK+GDL+YVGNSKGE+LI+D+K+IQ++ ++ + GGAVIKNIVFSRNGQYLLTNSNDRTI
Sbjct: 181 FNKHGDLVYVGNSKGEVLIIDHKSIQIYAMISIPGGAVIKNIVFSRNGQYLLTNSNDRTI 240
Query: 1121 RVYENHLPQKDGPATLDELSRTVDEVHGMEKLKAVGSKCLILSREFQDSINRIHWKTTCF 942
R+YEN LPQKDG L ++SRTVDEV +EK+K VGSKCL L REFQDSI ++HWK CF
Sbjct: 241 RIYENLLPQKDGCTALADMSRTVDEVDVVEKMKTVGSKCLALFREFQDSITKMHWKAPCF 300
Query: 941 SGDGEWVVGASGSKGEHKIYIWDRAGHLVKILEGPKEALMDIAWHXXXXXXXXXXVTGLV 762
SGDGEWV+G S SKGEHKIYIWDRAG+LVKILEGPKEAL+D+AWH +TGLV
Sbjct: 301 SGDGEWVIGGSASKGEHKIYIWDRAGYLVKILEGPKEALIDLAWHPVHPIVVSVSLTGLV 360
Query: 761 YIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXEFDLVPDTEKVKESNVNEDEEVDIFTVE 582
YIWAKDYTENWSAFAPDFK EFDLVP+TEKVKES+VNEDEEVDI TVE
Sbjct: 361 YIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLVPETEKVKESDVNEDEEVDIVTVE 420
Query: 581 KDSAFSDSDMSQEELCFLPAVPCPDSLELQDKYGGSSSKLVDSNHSGSPFSEEAGQNGQP 402
KD AFSDSDMSQEELCFLPAVPCPD+ E QDK GSSSKL+DSNHSGSP SE AGQNG
Sbjct: 421 KD-AFSDSDMSQEELCFLPAVPCPDASEQQDKCVGSSSKLMDSNHSGSPLSEGAGQNGMA 479
Query: 401 SNPASSPLEAVGNSMGEDTGLTESSKRRRKPSEKGLELQAEKVRKPIKKIKASGKLSKAK 222
N ASSPLE EDTG KR+RKPSEKGLELQAEKVRKP+K +K+SG+LSK K
Sbjct: 480 MNHASSPLE-------EDTG-GMRMKRKRKPSEKGLELQAEKVRKPLKPLKSSGRLSKVK 531
Query: 221 NKSMEEQDTSNGEYGDD 171
NKS+ + + SNG YGDD
Sbjct: 532 NKSV-DLEFSNGAYGDD 547
>emb|CAN70287.1| hypothetical protein VITISV_003927 [Vitis vinifera]
Length = 543
Score = 811 bits (2096), Expect = 0.0
Identities = 412/557 (73%), Positives = 450/557 (80%)
Frame = -1
Query: 1841 MNVSIIDPLQGDFPEIIEEYLEHGVMKCIAFNRRGTLLAAGCSDGTCVIWDFETRGIAKE 1662
MN IIDPLQGDFPE+IEEYLEHGVMKCIAFNRRGTLLAAGC+DG+C+IWDFETRGIAKE
Sbjct: 1 MNAPIIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCADGSCIIWDFETRGIAKE 60
Query: 1661 LRDKDSVCPITCVCWSKYGRHVLVSATDKSLTLWDVVNGEKITRITLQQTTLSARLHPSS 1482
L DKD V IT VCWSK G +LVSA DKSLTLWDVV+GEKITR TLQQT L ARLHP S
Sbjct: 61 LHDKDCVAAITSVCWSKDGHCILVSAADKSLTLWDVVSGEKITRTTLQQTPLQARLHPGS 120
Query: 1481 RVPSVCLACPLSSAPVLVDLNTGSTTVLPVSVSDTGNGVVPALRNKFSDGSPPLTPTAAC 1302
S+CLACPLSSAP++VDLNTGSTTVLPVSVSDTG G+ P RNKFSDGSPP TPTAAC
Sbjct: 121 -AKSLCLACPLSSAPMIVDLNTGSTTVLPVSVSDTGAGLPPPSRNKFSDGSPPFTPTAAC 179
Query: 1301 FNKYGDLIYVGNSKGEILIVDYKNIQVHGIVPVSGGAVIKNIVFSRNGQYLLTNSNDRTI 1122
FNKYGDL+YVGNSKGEILIVD+KN QV +VP+SGG+VIKNIVFSRNGQYLLTNSNDRTI
Sbjct: 180 FNKYGDLVYVGNSKGEILIVDHKNKQVRAVVPISGGSVIKNIVFSRNGQYLLTNSNDRTI 239
Query: 1121 RVYENHLPQKDGPATLDELSRTVDEVHGMEKLKAVGSKCLILSREFQDSINRIHWKTTCF 942
R+YEN LP KDG LDELS + DEV EKLKAVGSKCL L R+FQDSI +IHWK CF
Sbjct: 240 RIYENLLPLKDGLKVLDELSTSCDEVDEAEKLKAVGSKCLALFRDFQDSITKIHWKVPCF 299
Query: 941 SGDGEWVVGASGSKGEHKIYIWDRAGHLVKILEGPKEALMDIAWHXXXXXXXXXXVTGLV 762
SGDGEWVVG S SKGEHKIYIWDRAGHLVKILEGPKEAL+D+AWH +TGLV
Sbjct: 300 SGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVHPIVVSVSLTGLV 359
Query: 761 YIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXEFDLVPDTEKVKESNVNEDEEVDIFTVE 582
YIWAKDYTENWSAFAPDFK EFDL+P+TEKVK+++VNED+EVDI TVE
Sbjct: 360 YIWAKDYTENWSAFAPDFKELEENEEYIEREDEFDLMPETEKVKDTDVNEDDEVDIMTVE 419
Query: 581 KDSAFSDSDMSQEELCFLPAVPCPDSLELQDKYGGSSSKLVDSNHSGSPFSEEAGQNGQP 402
+S FSDSDMSQEELCFLPAVPCPD E QDK GS+SKL DSNHSGSP SEEAGQNGQ
Sbjct: 420 NESVFSDSDMSQEELCFLPAVPCPDVPEQQDKCVGSTSKLTDSNHSGSPLSEEAGQNGQA 479
Query: 401 SNPASSPLEAVGNSMGEDTGLTESSKRRRKPSEKGLELQAEKVRKPIKKIKASGKLSKAK 222
N ASSP+E EDTG T KR+RKPSEKG+ELQAEKVRKP+K +K+S
Sbjct: 480 MNHASSPVE-------EDTGGTR-LKRKRKPSEKGMELQAEKVRKPLKTMKSS------- 524
Query: 221 NKSMEEQDTSNGEYGDD 171
EQDT + + DD
Sbjct: 525 ----VEQDTDSYVFADD 537
>emb|CBI16678.3| unnamed protein product [Vitis vinifera]
Length = 530
Score = 795 bits (2054), Expect = 0.0
Identities = 403/557 (72%), Positives = 443/557 (79%)
Frame = -1
Query: 1841 MNVSIIDPLQGDFPEIIEEYLEHGVMKCIAFNRRGTLLAAGCSDGTCVIWDFETRGIAKE 1662
MN IIDPLQGDFPE+IEEYLEHGVMKCIAFNRRGTLLAAGC+DG+C+IWDFETRGIAKE
Sbjct: 1 MNAPIIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCADGSCIIWDFETRGIAKE 60
Query: 1661 LRDKDSVCPITCVCWSKYGRHVLVSATDKSLTLWDVVNGEKITRITLQQTTLSARLHPSS 1482
L DKD V IT VCWSK G +LVSA DKSLTLWDVV+GEKITR TLQQT L ARLHP S
Sbjct: 61 LHDKDCVAAITSVCWSKDGHCILVSAADKSLTLWDVVSGEKITRTTLQQTPLQARLHPGS 120
Query: 1481 RVPSVCLACPLSSAPVLVDLNTGSTTVLPVSVSDTGNGVVPALRNKFSDGSPPLTPTAAC 1302
S+CLACPLSSAP++VDLNTGSTTVLPVSVSDTG G+ P RNKFSDGSPP TPTAAC
Sbjct: 121 -AKSLCLACPLSSAPMIVDLNTGSTTVLPVSVSDTGAGLPPPSRNKFSDGSPPFTPTAAC 179
Query: 1301 FNKYGDLIYVGNSKGEILIVDYKNIQVHGIVPVSGGAVIKNIVFSRNGQYLLTNSNDRTI 1122
FNKYGDL+YVGNSKGEILIVD+KN QV +VP+SGG+VIKNIVFSRNGQYLLTNSNDRTI
Sbjct: 180 FNKYGDLVYVGNSKGEILIVDHKNKQVRAVVPISGGSVIKNIVFSRNGQYLLTNSNDRTI 239
Query: 1121 RVYENHLPQKDGPATLDELSRTVDEVHGMEKLKAVGSKCLILSREFQDSINRIHWKTTCF 942
R+YEN LP KDG KCL L R+FQDSI +IHWK CF
Sbjct: 240 RIYENLLPLKDG------------------------LKCLALFRDFQDSITKIHWKVPCF 275
Query: 941 SGDGEWVVGASGSKGEHKIYIWDRAGHLVKILEGPKEALMDIAWHXXXXXXXXXXVTGLV 762
SGDGEWVVG S SKGEHKIYIWDRAGHLVKILEGPKEAL+D+AWH +TGLV
Sbjct: 276 SGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVHPIVVSVSLTGLV 335
Query: 761 YIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXEFDLVPDTEKVKESNVNEDEEVDIFTVE 582
YIWAKDYTENWSAFAPDFK EFDL+P+TEKVK+++VNED+EVDI TVE
Sbjct: 336 YIWAKDYTENWSAFAPDFKELEENEEYIEREDEFDLMPETEKVKDTDVNEDDEVDIMTVE 395
Query: 581 KDSAFSDSDMSQEELCFLPAVPCPDSLELQDKYGGSSSKLVDSNHSGSPFSEEAGQNGQP 402
+S FSDSDMSQEELCFLPAVPCPD E QDK GS+SKL DSNHSGSP SEEAGQNGQ
Sbjct: 396 NESVFSDSDMSQEELCFLPAVPCPDVPEQQDKCVGSTSKLTDSNHSGSPLSEEAGQNGQA 455
Query: 401 SNPASSPLEAVGNSMGEDTGLTESSKRRRKPSEKGLELQAEKVRKPIKKIKASGKLSKAK 222
N ASSP+E EDTG T KR+RKPSEKG+ELQAEKVRKP+K +K+SGK+SK K
Sbjct: 456 MNHASSPVE-------EDTGGTR-LKRKRKPSEKGMELQAEKVRKPLKTMKSSGKISKIK 507
Query: 221 NKSMEEQDTSNGEYGDD 171
NK++ EQDT + + DD
Sbjct: 508 NKTVVEQDTDSYVFADD 524
>ref|XP_002329452.1| predicted protein [Populus trichocarpa] gi|222870132|gb|EEF07263.1|
predicted protein [Populus trichocarpa]
Length = 547
Score = 794 bits (2051), Expect = 0.0
Identities = 393/557 (70%), Positives = 451/557 (80%)
Frame = -1
Query: 1841 MNVSIIDPLQGDFPEIIEEYLEHGVMKCIAFNRRGTLLAAGCSDGTCVIWDFETRGIAKE 1662
MN IIDPLQGDFPE+IEEYL HGV KCIAFNRRGTLLAAGC+DG+CVIWDFETRG+AKE
Sbjct: 1 MNAPIIDPLQGDFPEVIEEYLHHGVTKCIAFNRRGTLLAAGCADGSCVIWDFETRGVAKE 60
Query: 1661 LRDKDSVCPITCVCWSKYGRHVLVSATDKSLTLWDVVNGEKITRITLQQTTLSARLHPSS 1482
LRDKD + IT +CWSKYG +LVS+ DKSL LWDVV+GEKITRITL T L ARLHP S
Sbjct: 61 LRDKDCIAAITSICWSKYGHRILVSSADKSLILWDVVSGEKITRITLHHTPLLARLHPGS 120
Query: 1481 RVPSVCLACPLSSAPVLVDLNTGSTTVLPVSVSDTGNGVVPALRNKFSDGSPPLTPTAAC 1302
+PS+CL CPLSSAP++VD NTG+TTVLPV+V + +G P RNK SDG PP TPTAAC
Sbjct: 121 SLPSLCLTCPLSSAPMIVDFNTGNTTVLPVTVPEADSGPAPPSRNKPSDG-PPYTPTAAC 179
Query: 1301 FNKYGDLIYVGNSKGEILIVDYKNIQVHGIVPVSGGAVIKNIVFSRNGQYLLTNSNDRTI 1122
FNK+GDL+YVGNSKGEILI+D+K+IQVH +VP GGAVIKNIVFSR+GQYLLTNSNDRTI
Sbjct: 180 FNKFGDLVYVGNSKGEILIIDHKSIQVHAMVPTPGGAVIKNIVFSRDGQYLLTNSNDRTI 239
Query: 1121 RVYENHLPQKDGPATLDELSRTVDEVHGMEKLKAVGSKCLILSREFQDSINRIHWKTTCF 942
R+YEN LP KDG L L++TVDEV G+EK+KAVGSKCL L REFQD+I ++HWK CF
Sbjct: 240 RIYENLLPLKDGLTVLGHLNKTVDEVAGVEKMKAVGSKCLALFREFQDTITKVHWKAPCF 299
Query: 941 SGDGEWVVGASGSKGEHKIYIWDRAGHLVKILEGPKEALMDIAWHXXXXXXXXXXVTGLV 762
SGDGEWV+G S SKGEHKIYIWDR GHLVKILEGPKEAL+D+AWH +TG+V
Sbjct: 300 SGDGEWVIGGSASKGEHKIYIWDRVGHLVKILEGPKEALIDLAWHPVHPIIVSVSLTGMV 359
Query: 761 YIWAKDYTENWSAFAPDFKXXXXXXXXXXXXXEFDLVPDTEKVKESNVNEDEEVDIFTVE 582
Y+WAKD+TENWSAFAPDFK EFDL+P+TEKVKES++NED+EVDI TVE
Sbjct: 360 YVWAKDHTENWSAFAPDFKELEENEEYVEREDEFDLIPETEKVKESDINEDDEVDIVTVE 419
Query: 581 KDSAFSDSDMSQEELCFLPAVPCPDSLELQDKYGGSSSKLVDSNHSGSPFSEEAGQNGQP 402
KD AFSDSDMSQEE+CFLPA PCPD E QDK GSSSKL+DSN+SGSP S+EAGQNGQ
Sbjct: 420 KD-AFSDSDMSQEEICFLPATPCPDVPEQQDKCVGSSSKLMDSNNSGSPLSDEAGQNGQA 478
Query: 401 SNPASSPLEAVGNSMGEDTGLTESSKRRRKPSEKGLELQAEKVRKPIKKIKASGKLSKAK 222
N ASSPLE EDTG T KR+RKPSEKGLELQAEK RKP +K+ G++SK +
Sbjct: 479 MNHASSPLE-------EDTGGTR-MKRKRKPSEKGLELQAEKGRKP---LKSYGRVSKVR 527
Query: 221 NKSMEEQDTSNGEYGDD 171
+K + + D +NG YGDD
Sbjct: 528 SKPVADLDITNGIYGDD 544