BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012773
         (1625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-l...   535   e-149
emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]   527   e-147
ref|XP_002531128.1| exosome complex exonuclease rrp45, putative ...   490   e-136
ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-l...   488   e-135
ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-l...   481   e-133

>ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-like [Vitis vinifera]
          Length = 467

 Score =  535 bits (1377), Expect = e-149
 Identities = 284/451 (62%), Positives = 337/451 (74%), Gaps = 11/451 (2%)
 Frame = -3

Query: 1545 MEQRLANTWRMTVNEKKFIETALLADLRVDGRNPYDYRRLTIKFGKEDGSSEVQLGQTHV 1366
            MEQRLA+T+RMTVNEKKFIE ALL+DLR+DGR P+D+RR++IKFG+EDGSSEVQLGQTHV
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGREDGSSEVQLGQTHV 60

Query: 1365 LGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 1186
            +GFV+ QL+QPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGE+AVEL R+IDRGLRESRA
Sbjct: 61   MGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVIDRGLRESRA 120

Query: 1185 VDTESLCVLAGKLVWSIRVDLHVIDXXXXXXXXXXXXXXXXLMTFRRPECTLGGEDGQEV 1006
            VD ESLCVLAGKLVWSIR+DLH+ID                L+TFRRPEC+ GGEDGQE+
Sbjct: 121  VDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECSFGGEDGQEL 180

Query: 1005 IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 826
            IVHPPEV+EPLPLI+HHLPIAVTFA +G+ NIMVIDP+HSEEAVMGGRMTATLN NG++C
Sbjct: 181  IVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTATLNTNGDVC 240

Query: 825  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDVVEVYSTERAQRKIKRHXXXXXXXX 646
            AIQKAGGEG++QS+IMQCLRIASVKAADITSKIK+ VE ++TERA RKIKRH        
Sbjct: 241  AIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKRHSSSIAVDV 300

Query: 645  XXXDIRMKQ-QNQSTSHKVVGELSKLQMD----EPEGSCSSKGDGIDXXXXXXXXXXKGR 481
                 +M++ +NQS   KVV ELS   M+    E E SC ++   ++            R
Sbjct: 301  SGPGAKMRENKNQSVDEKVVNELSSHHMERLKMESEESCVTQSSDVEVKTQLSEQGRTNR 360

Query: 480  SD-SVKKLGGAPSSWDPYTSCIDYDSLKTSVASPERI--TPKREDDQGPM---EVTLEEP 319
            SD + +   G PSSWDPY+  ID D LK S+AS   I    K++D +G M   +V  EEP
Sbjct: 361  SDENTRSFIGGPSSWDPYSKGIDSDFLKASLASHGLIKQNTKQKDSRGEMKAPDVKSEEP 420

Query: 318  VIDLPTTKSTPVAAEDIGQQTSIAMTLQDAV 226
              D+      P+       QT+   TL+DAV
Sbjct: 421  NADIDPA-LCPMKTVGTTPQTNGEKTLKDAV 450


>emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]
          Length = 476

 Score =  527 bits (1357), Expect = e-147
 Identities = 284/460 (61%), Positives = 337/460 (73%), Gaps = 20/460 (4%)
 Frame = -3

Query: 1545 MEQRLANTWRMTVNEKKFIETALLADLRVDGRNPYDYRRLTIKFGK---------EDGSS 1393
            MEQRLA+T+RMTVNEKKFIE ALL+DLR+DGR P+D+RR++IKFG+         EDGSS
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGRQVFIRTICAEDGSS 60

Query: 1392 EVQLGQTHVLGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARII 1213
            EVQLGQTHV+GFV+ QL+QPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGE+AVEL R+I
Sbjct: 61   EVQLGQTHVMGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVI 120

Query: 1212 DRGLRESRAVDTESLCVLAGKLVWSIRVDLHVIDXXXXXXXXXXXXXXXXLMTFRRPECT 1033
            DRGLRESRAVD ESLCVLAGKLVWSIR+DLH+ID                L+TFRRPEC+
Sbjct: 121  DRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECS 180

Query: 1032 LGGEDGQEVIVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTA 853
             GGEDGQE+IVHPPEV+EPLPLI+HHLPIAVTFA +G+ NIMVIDP+HSEEAVMGGRMTA
Sbjct: 181  FGGEDGQELIVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTA 240

Query: 852  TLNMNGEICAIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDVVEVYSTERAQRKIKR 673
            TLN NG++CAIQKAGGEG++QS+IMQCLRIASVKAADITSKIK+ VE ++TERA RKIKR
Sbjct: 241  TLNTNGDVCAIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKR 300

Query: 672  HXXXXXXXXXXXDIRMKQ-QNQSTSHKVVGELSKLQMD----EPEGSCSSKGDGIDXXXX 508
            H             +M++ +NQS   KVV ELS   M+    E E SC ++   ++    
Sbjct: 301  HSSSIAVDVSGPGAKMRENKNQSVDEKVVNELSSHHMERLKMESEESCVTQSSDVEVKTQ 360

Query: 507  XXXXXXKGRSD-SVKKLGGAPSSWDPYTSCIDYDSLKTSVASPERI--TPKREDDQGPM- 340
                    RSD + +   G PSSWDPY+  ID D LK S+AS   I    K++D +G M 
Sbjct: 361  LSEQGRTNRSDENTRSFIGGPSSWDPYSKGIDSDFLKASLASHGLIKQNTKQKDSRGEMK 420

Query: 339  --EVTLEEPVIDLPTTKSTPVAAEDIGQQTSIAMTLQDAV 226
              +V  EEP  D+      P+       QT+   TL+DAV
Sbjct: 421  APDVKSEEPNADIDPA-LCPMKTVGTTPQTNGEKTLKDAV 459


>ref|XP_002531128.1| exosome complex exonuclease rrp45, putative [Ricinus communis]
            gi|223529292|gb|EEF31262.1| exosome complex exonuclease
            rrp45, putative [Ricinus communis]
          Length = 463

 Score =  490 bits (1262), Expect = e-136
 Identities = 263/448 (58%), Positives = 314/448 (70%), Gaps = 8/448 (1%)
 Frame = -3

Query: 1545 MEQRLANTWRMTVNEKKFIETALLADLRVDGRNPYDYRRLTIKFGKEDGSSEVQLGQTHV 1366
            ME R+A+TWRM+VNEKKFIE+AL +DLR+DGRN +++R+LTIKFG+EDGSSEVQLGQTHV
Sbjct: 1    MEGRVASTWRMSVNEKKFIESALDSDLRIDGRNSHEFRKLTIKFGREDGSSEVQLGQTHV 60

Query: 1365 LGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 1186
            +GFV+SQLVQPYRDRPNEG+LSI++EFSPMADPSFE GRPGESAVEL RIIDRGLRESRA
Sbjct: 61   MGFVTSQLVQPYRDRPNEGSLSIFSEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 1185 VDTESLCVLAGKLVWSIRVDLHVIDXXXXXXXXXXXXXXXXLMTFRRPECTLGGEDGQEV 1006
            VDTESLCVLAGKLVW+IR+DLH++D                L+TFRRPECTLGGEDGQ+V
Sbjct: 121  VDTESLCVLAGKLVWAIRIDLHILDNGGNLVDAANIAALAALLTFRRPECTLGGEDGQQV 180

Query: 1005 IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 826
            IVHPPEVKEPLPLI+HHLPIAVTFAF    + MV+DP+H+EEAVM GRMT T+N NG+IC
Sbjct: 181  IVHPPEVKEPLPLIVHHLPIAVTFAFFSSEHTMVVDPTHNEEAVMTGRMTVTVNANGDIC 240

Query: 825  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDVVEVYSTERAQRKIKRHXXXXXXXX 646
            +IQKAGGEGVMQS IM CLR+AS  A  IT KIKD VE Y+TERA RKIKRH        
Sbjct: 241  SIQKAGGEGVMQSRIMHCLRVASRNAESITKKIKDAVEAYNTERALRKIKRHSTSVAVNV 300

Query: 645  XXXDIRMKQQNQSTSHKVVGELSKLQMDE----PEGSCSSKGDGID-XXXXXXXXXXKGR 481
                   + +N+    K + E+S+ QM+      E S  S+ +GID             R
Sbjct: 301  STAIDVRELENKPFIQKGISEISRHQMERLKLTSEESSVSQSNGIDSGLRSSEQGGTSNR 360

Query: 480  SDSVKKLGGAPSSWDPYTSCIDYDSLKTSVASPERITPKRE---DDQGPMEVTLEEPVID 310
              +     G PS WDPY+  +D D LK S+AS     P +E   + +    V  + P   
Sbjct: 361  EGNATNFLGGPSRWDPYSKGVDSDFLKASLASHGVSAPNKEKGGEQKSTQAVDEKAPETA 420

Query: 309  LPTTKSTPVAAEDIGQQTSIAMTLQDAV 226
             P T        + G QTS   TL+DAV
Sbjct: 421  KPATSVGETF--ETGIQTSGEKTLKDAV 446


>ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 452

 Score =  488 bits (1257), Expect = e-135
 Identities = 260/445 (58%), Positives = 309/445 (69%), Gaps = 5/445 (1%)
 Frame = -3

Query: 1545 MEQRLANTWRMTVNEKKFIETALLADLRVDGRNPYDYRRLTIKFGKEDGSSEVQLGQTHV 1366
            MEQRLANTWR++ NEKKFIETALL+DLRVDGR P+DYR LTI FGK+DGSSEVQLGQTHV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 1365 LGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 1186
            +GFV++QLVQPYRDRPNEGTLSIYTEFSPMADPSFE GRPGESAVEL R+IDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 1185 VDTESLCVLAGKLVWSIRVDLHVIDXXXXXXXXXXXXXXXXLMTFRRPECTLGGEDGQEV 1006
            VDTESLCV++GK VW+IRVDLH++D                L TFRRPEC+L G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 1005 IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 826
            IVHPPEV+EPLPLIIHHLPIAVTFAF    +I+VIDP+H EEAVMGGRMT TLN N ++C
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 825  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDVVEVYSTERAQRKIKRHXXXXXXXX 646
            AIQKAGGEGV++S+IMQCLRIASVKA DIT+KIK+ VE YS+ R  RKIKRH        
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPSVNLDVG 300

Query: 645  XXXDIRMKQQNQSTSHKVVGELSKLQMDEPEGSCSSKGDGIDXXXXXXXXXXKGRSDSVK 466
                     Q  S   K + +         + S  S+   I             R    K
Sbjct: 301  GGTGSLKDSQGISDGQKSIND---------QESVVSQSGSIKNDASTNQGQLDKRDSDAK 351

Query: 465  KLGGAPSSWDPYTSCIDYDSLKTSVASPERITPKREDDQGPMEVTLEEPVIDLPTTK--- 295
               G PS WDP++   D D LK ++AS   +T  +++D    E+   E ++D    K   
Sbjct: 352  NFIGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSD-EMMSSESMVDEQEAKVDE 410

Query: 294  --STPVAAEDIGQQTSIAMTLQDAV 226
               +PVAA+ + ++     TL+DAV
Sbjct: 411  VNLSPVAAKTLSEENG-KKTLKDAV 434


>ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 454

 Score =  481 bits (1238), Expect = e-133
 Identities = 260/447 (58%), Positives = 308/447 (68%), Gaps = 7/447 (1%)
 Frame = -3

Query: 1545 MEQRLANTWRMTVNEKKFIETALLADLRVDGRNPYDYRRLTIKFGKEDGSSEVQLGQTHV 1366
            MEQRLANTWR++ NEKKFIETALL+DLRVDGR P+DYR LTI FGK+DGSSEVQLGQTHV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 1365 LGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 1186
            +GFV++QLVQPYRDRPNEGTLSIYTEFSPMADPSFE GRPGESAVEL R+IDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 1185 VDTESLCVLAGKLVWSIRVDLHVIDXXXXXXXXXXXXXXXXLMTFRRPECTLGGEDGQEV 1006
            VDTESLCV++GK VW+IRVDLH++D                L TFRRPEC+L G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 1005 IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 826
            IVHPPEV+EPLPLIIHHLPIAVTFAF    +I+VIDP+H EEAVMGGRMT TLN N ++C
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 825  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIK--DVVEVYSTERAQRKIKRHXXXXXX 652
            AIQKAGGEGV++S+IMQCLRIASVKA DIT+KIK    VE YS+ R  RKIKRH      
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKMQAAVETYSSARQLRKIKRHPSVNLD 300

Query: 651  XXXXXDIRMKQQNQSTSHKVVGELSKLQMDEPEGSCSSKGDGIDXXXXXXXXXXKGRSDS 472
                       Q  S   K + +         + S  S+   I             R   
Sbjct: 301  VGGGTGSLKDSQGISDGQKSIND---------QESVVSQSGSIKNDASTNQGQLDKRDVD 351

Query: 471  VKKLGGAPSSWDPYTSCIDYDSLKTSVASPERITPKREDDQGPMEVTLEEPVIDLPTTK- 295
             K   G PS WDP++   D D LK ++AS   +T  +++D    E+   E ++D    K 
Sbjct: 352  AKNFIGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSD-EMMSSESMVDEQEAKV 410

Query: 294  ----STPVAAEDIGQQTSIAMTLQDAV 226
                 +PVAA+ + ++     TL+DAV
Sbjct: 411  DEVNLSPVAAKTLSEENG-KKTLKDAV 436