BLASTX nr result

ID: Coptis23_contig00012752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012752
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15731.3| unnamed protein product [Vitis vinifera]              199   1e-48
ref|XP_002280705.1| PREDICTED: uncharacterized protein LOC100266...   199   1e-48
ref|XP_002275184.1| PREDICTED: uncharacterized protein LOC100256...   175   2e-41
ref|XP_002512879.1| conserved hypothetical protein [Ricinus comm...   165   2e-38
ref|XP_002298655.1| predicted protein [Populus trichocarpa] gi|2...   163   6e-38

>emb|CBI15731.3| unnamed protein product [Vitis vinifera]
          Length = 733

 Score =  199 bits (505), Expect = 1e-48
 Identities = 116/249 (46%), Positives = 154/249 (61%), Gaps = 7/249 (2%)
 Frame = +2

Query: 2    TFLRQKVTLASSKAVSSGVD-----PR--NEIKTSSDLKRSHAVKLCRQPSNINGLDSVH 160
            TFLRQKVTLASS++ S   +     PR  N++K S     SH++   R  SN NG+D+ H
Sbjct: 506  TFLRQKVTLASSRSTSVPGNGGQRVPRMKNDVKPSLISNTSHSLP-SRDFSNSNGVDAAH 564

Query: 161  TVECKKESSQVLGSGISNSMGCIYTANSRSNESRSKQEMSLPLSSQEDHLAELICIDLTA 340
            T+    +  +++ + + +  G         + S+S +E   P      H ++L       
Sbjct: 565  TIRSTSQGVEMIETAVPDYTG------DPVHRSQSNEEGGSPAL----HFSKL------- 607

Query: 341  NMDEVNDFISYEGMKTDGKDYSHKSENKYDYSSVKVNENTTGAGVLRYALHLRFLCLHPK 520
                 ++++    +     +  H +E+K  +S  KVNENTTGAGVLRYALHLRFLC  PK
Sbjct: 608  ---NSSEYLKTSRLNNAPLNTCHVTESKSVHSPSKVNENTTGAGVLRYALHLRFLCTPPK 664

Query: 521  KPSRSVQRCKSDPLSSPEKNSMDVERERRFYLYNDLRVVFPQRHSDADEGKLNVDYHFPE 700
            K  RS+QRCKSDPLS P +++MD++ ERRFYLYNDLRVVFPQRHSDADEGKL V+Y FP 
Sbjct: 665  KCVRSIQRCKSDPLSVPTRDNMDIDGERRFYLYNDLRVVFPQRHSDADEGKLQVEYDFPS 724

Query: 701  DPKYFDIIN 727
            DPKYFDI N
Sbjct: 725  DPKYFDISN 733


>ref|XP_002280705.1| PREDICTED: uncharacterized protein LOC100266395 [Vitis vinifera]
          Length = 765

 Score =  199 bits (505), Expect = 1e-48
 Identities = 116/249 (46%), Positives = 154/249 (61%), Gaps = 7/249 (2%)
 Frame = +2

Query: 2    TFLRQKVTLASSKAVSSGVD-----PR--NEIKTSSDLKRSHAVKLCRQPSNINGLDSVH 160
            TFLRQKVTLASS++ S   +     PR  N++K S     SH++   R  SN NG+D+ H
Sbjct: 538  TFLRQKVTLASSRSTSVPGNGGQRVPRMKNDVKPSLISNTSHSLP-SRDFSNSNGVDAAH 596

Query: 161  TVECKKESSQVLGSGISNSMGCIYTANSRSNESRSKQEMSLPLSSQEDHLAELICIDLTA 340
            T+    +  +++ + + +  G         + S+S +E   P      H ++L       
Sbjct: 597  TIRSTSQGVEMIETAVPDYTG------DPVHRSQSNEEGGSPAL----HFSKL------- 639

Query: 341  NMDEVNDFISYEGMKTDGKDYSHKSENKYDYSSVKVNENTTGAGVLRYALHLRFLCLHPK 520
                 ++++    +     +  H +E+K  +S  KVNENTTGAGVLRYALHLRFLC  PK
Sbjct: 640  ---NSSEYLKTSRLNNAPLNTCHVTESKSVHSPSKVNENTTGAGVLRYALHLRFLCTPPK 696

Query: 521  KPSRSVQRCKSDPLSSPEKNSMDVERERRFYLYNDLRVVFPQRHSDADEGKLNVDYHFPE 700
            K  RS+QRCKSDPLS P +++MD++ ERRFYLYNDLRVVFPQRHSDADEGKL V+Y FP 
Sbjct: 697  KCVRSIQRCKSDPLSVPTRDNMDIDGERRFYLYNDLRVVFPQRHSDADEGKLQVEYDFPS 756

Query: 701  DPKYFDIIN 727
            DPKYFDI N
Sbjct: 757  DPKYFDISN 765


>ref|XP_002275184.1| PREDICTED: uncharacterized protein LOC100256630 [Vitis vinifera]
          Length = 759

 Score =  175 bits (444), Expect = 2e-41
 Identities = 107/242 (44%), Positives = 142/242 (58%)
 Frame = +2

Query: 2    TFLRQKVTLASSKAVSSGVDPRNEIKTSSDLKRSHAVKLCRQPSNINGLDSVHTVECKKE 181
            TFLRQKVT+ SS   S  V+           +R H +K+  +   I+  D  H VE  +E
Sbjct: 534  TFLRQKVTIGSSCPTSPRVNGE---------QRDHDMKV--KDKLISSSDKSHQVENSRE 582

Query: 182  SSQVLGSGISNSMGCIYTANSRSNESRSKQEMSLPLSSQEDHLAELICIDLTANMDEVND 361
             +      + N+M  I    S S E R   ++   + +++    ++  + L    +    
Sbjct: 583  ITTSYEFDMLNAMRSIEP--STSFEGRDGSDLVHSIDTRDAGRIDVPSLLLEEGCNSAES 640

Query: 362  FISYEGMKTDGKDYSHKSENKYDYSSVKVNENTTGAGVLRYALHLRFLCLHPKKPSRSVQ 541
              + E       D  ++++ K  +   K NEN+T AG LRYALHLRFLC   KK SRS+Q
Sbjct: 641  SRTLESESWG--DACNENDRKSAHGCSKANENSTSAGALRYALHLRFLC-PSKKCSRSIQ 697

Query: 542  RCKSDPLSSPEKNSMDVERERRFYLYNDLRVVFPQRHSDADEGKLNVDYHFPEDPKYFDI 721
            RCKSDPLS P++  +D+E ERRFYLYNDLRVVFPQRHSDADEGKLNV+YH+PEDPKYFDI
Sbjct: 698  RCKSDPLSIPQRTCLDIEGERRFYLYNDLRVVFPQRHSDADEGKLNVEYHYPEDPKYFDI 757

Query: 722  IN 727
             N
Sbjct: 758  GN 759


>ref|XP_002512879.1| conserved hypothetical protein [Ricinus communis]
            gi|223547890|gb|EEF49382.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 753

 Score =  165 bits (417), Expect = 2e-38
 Identities = 107/242 (44%), Positives = 133/242 (54%)
 Frame = +2

Query: 2    TFLRQKVTLASSKAVSSGVDPRNEIKTSSDLKRSHAVKLCRQPSNINGLDSVHTVECKKE 181
            TFLRQKVTL +S  +SS +  R      + L      K+           +V++V    E
Sbjct: 536  TFLRQKVTLDTSGTISSELKHRQMKHGQTGLDTKMKDKMASN-------HTVNSVTAMNE 588

Query: 182  SSQVLGSGISNSMGCIYTANSRSNESRSKQEMSLPLSSQEDHLAELICIDLTANMDEVND 361
            +S+V G        C    +   N         LP  SQ    A +    L  +    N 
Sbjct: 589  NSEVKGIDY-----CELVVSDTEN---------LPKQSQNMEKAGVDSFMLGNDCGNGNC 634

Query: 362  FISYEGMKTDGKDYSHKSENKYDYSSVKVNENTTGAGVLRYALHLRFLCLHPKKPSRSVQ 541
              + E  +  G D     + +  +  +KVNE T   G LRYALHLRF+C  PKK +RSVQ
Sbjct: 635  HGTRE--ECTGVDTCIGIDRRSAHGCLKVNE-TVQHGALRYALHLRFVCPSPKKSARSVQ 691

Query: 542  RCKSDPLSSPEKNSMDVERERRFYLYNDLRVVFPQRHSDADEGKLNVDYHFPEDPKYFDI 721
            RCKSDP S P+K  +DVE +RRFYLYNDLRVVFPQRHSDADEGKLNV+YHFPEDP+YFDI
Sbjct: 692  RCKSDPTSVPQKKHLDVEGDRRFYLYNDLRVVFPQRHSDADEGKLNVEYHFPEDPRYFDI 751

Query: 722  IN 727
             N
Sbjct: 752  SN 753


>ref|XP_002298655.1| predicted protein [Populus trichocarpa] gi|222845913|gb|EEE83460.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score =  163 bits (413), Expect = 6e-38
 Identities = 75/95 (78%), Positives = 83/95 (87%)
 Frame = +2

Query: 443 KVNENTTGAGVLRYALHLRFLCLHPKKPSRSVQRCKSDPLSSPEKNSMDVERERRFYLYN 622
           K+NENT G G LRYALHLRFLC  PKK S+SVQ+C SDP++ P+K S+ VE ERRFYLYN
Sbjct: 544 KINENTPGGGALRYALHLRFLCPSPKKSSKSVQKCVSDPIAIPQKMSLGVEGERRFYLYN 603

Query: 623 DLRVVFPQRHSDADEGKLNVDYHFPEDPKYFDIIN 727
           DLRVVFPQRHSDADEGKLNVDYHFPEDP+YFDI N
Sbjct: 604 DLRVVFPQRHSDADEGKLNVDYHFPEDPRYFDISN 638


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