BLASTX nr result

ID: Coptis23_contig00012744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012744
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303378.1| predicted protein [Populus trichocarpa] gi|2...   290   3e-76
ref|XP_004147234.1| PREDICTED: vesicle-associated protein 2-1-li...   289   1e-75
ref|XP_004147233.1| PREDICTED: vesicle-associated protein 2-1-li...   288   2e-75
ref|XP_002531789.1| vesicle-associated membrane protein, putativ...   276   5e-72
ref|XP_003549940.1| PREDICTED: vesicle-associated protein 2-1-li...   275   1e-71

>ref|XP_002303378.1| predicted protein [Populus trichocarpa] gi|222840810|gb|EEE78357.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  290 bits (743), Expect = 3e-76
 Identities = 153/221 (69%), Positives = 168/221 (76%), Gaps = 2/221 (0%)
 Frame = -2

Query: 895 SGSSNHLISVHPDDLRFQFELDKQIYCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVI 716
           +G  N LISVHP+DL+F FEL+KQ +CDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVI
Sbjct: 3   AGDGNQLISVHPEDLKFIFELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVI 62

Query: 715 QPWDSCFITVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPSDTFNRDGD-RVIED 539
           QPWDSC I VTLQAQREYP DMQCKDKFLLQSTIVPPH DVDELP DTF +D D +VI D
Sbjct: 63  QPWDSCVIRVTLQAQREYPSDMQCKDKFLLQSTIVPPHADVDELPPDTFIKDSDGKVIHD 122

Query: 538 CKLRVVY-TSSSSQGQGEDQYASKDPNQSVDSNSEVQRAKEERDTAVRQTHXXXXXXXXX 362
            KLRVVY   SS+QG  ED+   K   QS D+NS VQ  K+ERD AVRQT          
Sbjct: 123 RKLRVVYIPPSSTQGNSEDE-GLKGSTQSPDANSAVQSLKDERDAAVRQTQLLQQELDLL 181

Query: 361 XXXRNRSADSGFSLTFAAFVGLIGVMVGFILNLTFSVPPTE 239
              R R +D GFSL FA  VGLIG+MVGF+LNL+ S P TE
Sbjct: 182 RRRRYRKSDPGFSLMFAFVVGLIGIMVGFLLNLSLSSPSTE 222


>ref|XP_004147234.1| PREDICTED: vesicle-associated protein 2-1-like isoform 2 [Cucumis
           sativus] gi|449523728|ref|XP_004168875.1| PREDICTED:
           vesicle-associated protein 2-1-like isoform 2 [Cucumis
           sativus]
          Length = 216

 Score =  289 bits (739), Expect = 1e-75
 Identities = 143/220 (65%), Positives = 164/220 (74%), Gaps = 1/220 (0%)
 Frame = -2

Query: 895 SGSSNHLISVHPDDLRFQFELDKQIYCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVI 716
           +G  N LISV PD+L+FQ ELDKQ +CDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGV+
Sbjct: 3   AGGGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVV 62

Query: 715 QPWDSCFITVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPSDTFNRDGDRVIEDC 536
           QPWDSC I VTLQA REYP DMQCKDKFLLQSTIVPP+TDVDELPSD FN+D  + IE+C
Sbjct: 63  QPWDSCIIRVTLQAMREYPADMQCKDKFLLQSTIVPPNTDVDELPSDAFNKDSGKTIEEC 122

Query: 535 KLRVVYTS-SSSQGQGEDQYASKDPNQSVDSNSEVQRAKEERDTAVRQTHXXXXXXXXXX 359
           KL+V+Y S +S+ G  ED+        S  S+S V R +EERD A+RQTH          
Sbjct: 123 KLKVIYISPTSALGNSEDE------KNSSQSSSAVHRLREERDMAIRQTHQLQQELDMMK 176

Query: 358 XXRNRSADSGFSLTFAAFVGLIGVMVGFILNLTFSVPPTE 239
             + R  D GFS TFA FVG +G+M GF+LNLT S P TE
Sbjct: 177 RRKFRKGDPGFSFTFAIFVGFVGIMAGFLLNLTLSSPSTE 216


>ref|XP_004147233.1| PREDICTED: vesicle-associated protein 2-1-like isoform 1 [Cucumis
           sativus] gi|449523726|ref|XP_004168874.1| PREDICTED:
           vesicle-associated protein 2-1-like isoform 1 [Cucumis
           sativus]
          Length = 220

 Score =  288 bits (737), Expect = 2e-75
 Identities = 143/221 (64%), Positives = 168/221 (76%), Gaps = 2/221 (0%)
 Frame = -2

Query: 895 SGSSNHLISVHPDDLRFQFELDKQIYCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVI 716
           +G  N LISV PD+L+FQ ELDKQ +CDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGV+
Sbjct: 3   AGGGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVV 62

Query: 715 QPWDSCFITVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPSDTFNRDGDRVIEDC 536
           QPWDSC I VTLQA REYP DMQCKDKFLLQSTIVPP+TDVDELPSD FN+D  + IE+C
Sbjct: 63  QPWDSCIIRVTLQAMREYPADMQCKDKFLLQSTIVPPNTDVDELPSDAFNKDSGKTIEEC 122

Query: 535 KLRVVYTS-SSSQGQGEDQYASKDPNQSVDSNSEV-QRAKEERDTAVRQTHXXXXXXXXX 362
           KL+V+Y S +S+ G  ED+   K+ +QS   ++E+  R +EERD A+RQTH         
Sbjct: 123 KLKVIYISPTSALGNSEDE---KNSSQSSSVSAEILHRLREERDMAIRQTHQLQQELDMM 179

Query: 361 XXXRNRSADSGFSLTFAAFVGLIGVMVGFILNLTFSVPPTE 239
              + R  D GFS TFA FVG +G+M GF+LNLT S P TE
Sbjct: 180 KRRKFRKGDPGFSFTFAIFVGFVGIMAGFLLNLTLSSPSTE 220


>ref|XP_002531789.1| vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223528582|gb|EEF30603.1| vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 220

 Score =  276 bits (707), Expect = 5e-72
 Identities = 140/223 (62%), Positives = 167/223 (74%), Gaps = 4/223 (1%)
 Frame = -2

Query: 895 SGSSNHLISVHPDDLRFQFELDKQIYCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVI 716
           +G  N LISVHPD+L+F FEL+KQ +CDLKV NNTEHHVAFKVKTTSPKKYFVRPNTGVI
Sbjct: 3   AGGGNQLISVHPDELKFIFELEKQSFCDLKVVNNTEHHVAFKVKTTSPKKYFVRPNTGVI 62

Query: 715 QPWDSCFITVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPSDTFNRDG-DRVIED 539
           QPWDSC I VTLQAQ+E PPDMQCKDKFLLQSTIVP HTDVDELP DTF +DG  + +E+
Sbjct: 63  QPWDSCIIRVTLQAQQEAPPDMQCKDKFLLQSTIVPAHTDVDELPPDTFTKDGTGKTVEE 122

Query: 538 CKLRVVYTSSSSQGQGEDQYASKDPNQSVDSNSE---VQRAKEERDTAVRQTHXXXXXXX 368
           CKLRV+Y + S+QG  ED+       +S  +N E   +Q  K+ERD A++QT        
Sbjct: 123 CKLRVLYVAPSAQGNSEDEAL-----RSSLTNPEAYGLQHLKDERDAAIKQTQQLQHELD 177

Query: 367 XXXXXRNRSADSGFSLTFAAFVGLIGVMVGFILNLTFSVPPTE 239
                R R +D GFSLTFA  VGL+G+++GF+LNL+ S P TE
Sbjct: 178 MMKRRRYRKSDPGFSLTFAFVVGLVGILLGFLLNLSLSSPSTE 220


>ref|XP_003549940.1| PREDICTED: vesicle-associated protein 2-1-like [Glycine max]
          Length = 222

 Score =  275 bits (704), Expect = 1e-71
 Identities = 145/222 (65%), Positives = 168/222 (75%), Gaps = 3/222 (1%)
 Frame = -2

Query: 895 SGSSNHLISVHPDDLRFQFELDKQIYCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVI 716
           + +SN LI+V+PD+LRFQFEL+KQ YCDLKV NNTE++VAFKVKTTSPKKYFVRPNTGV+
Sbjct: 3   ASASNSLITVNPDELRFQFELEKQTYCDLKVLNNTENYVAFKVKTTSPKKYFVRPNTGVV 62

Query: 715 QPWDSCFITVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPSDTFNRDGDRVIEDC 536
            PWD C I VTLQAQ+EYPPDMQCKDKFLLQSTIV P+TDVD+LP DTFN+DG++ IED 
Sbjct: 63  HPWDLCIIRVTLQAQQEYPPDMQCKDKFLLQSTIVNPNTDVDDLPPDTFNKDGEKSIEDM 122

Query: 535 KLRVVYTS-SSSQGQGEDQYASKDPNQSVDSNSE--VQRAKEERDTAVRQTHXXXXXXXX 365
           KLRVVY S  S QG  ED    K+  Q +D+NS   VQR KEERD  V Q+         
Sbjct: 123 KLRVVYISPMSPQGSTEDD-TVKNSTQKLDANSSETVQRLKEERDAYVLQSR-QLQQELD 180

Query: 364 XXXXRNRSADSGFSLTFAAFVGLIGVMVGFILNLTFSVPPTE 239
               RNR  DSGFS TFA FVGLIG++ G +L L+ S PPTE
Sbjct: 181 ILKRRNRRGDSGFSFTFAVFVGLIGLLCGLLLKLSLSSPPTE 222


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