BLASTX nr result

ID: Coptis23_contig00012726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012726
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241582.1| uncharacterized protein LOC100781301 [Glycin...   172   5e-41
ref|XP_003592219.1| Sec-independent protein translocase protein ...   171   6e-41
emb|CBI22684.3| unnamed protein product [Vitis vinifera]              171   8e-41
ref|XP_002270827.1| PREDICTED: uncharacterized protein LOC100254...   171   8e-41
ref|XP_003556118.1| PREDICTED: uncharacterized protein LOC100799...   171   1e-40

>ref|NP_001241582.1| uncharacterized protein LOC100781301 [Glycine max]
           gi|255639713|gb|ACU20150.1| unknown [Glycine max]
          Length = 238

 Score =  172 bits (435), Expect = 5e-41
 Identities = 92/108 (85%), Positives = 98/108 (90%), Gaps = 1/108 (0%)
 Frame = +3

Query: 186 LGRHGLVTPWTGLKQLAGVSVKQK-YVRIERKGRCKGKVVYASLFGVGAPEALVIGVVAL 362
           LGR GLV+PW+GLK L G+S K K  + I+RKG CKGKVVYASLFGVGAPEALVIGVVAL
Sbjct: 39  LGR-GLVSPWSGLKHL-GISAKAKPLIHIDRKGGCKGKVVYASLFGVGAPEALVIGVVAL 96

Query: 363 LVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDD 506
           LVFGPKGLAEVARNLGKTLR FQPTI+ELQDVSREFKSTLEREIGLDD
Sbjct: 97  LVFGPKGLAEVARNLGKTLRTFQPTIKELQDVSREFKSTLEREIGLDD 144


>ref|XP_003592219.1| Sec-independent protein translocase protein tatA/E-like protein
           [Medicago truncatula] gi|355481267|gb|AES62470.1|
           Sec-independent protein translocase protein tatA/E-like
           protein [Medicago truncatula]
          Length = 258

 Score =  171 bits (434), Expect = 6e-41
 Identities = 98/138 (71%), Positives = 108/138 (78%), Gaps = 4/138 (2%)
 Frame = +3

Query: 108 KTSSQFSISASLLVSS-PQTTNYPIPQLGRHGLVTPWTGLKQLAGVSVKQK---YVRIER 275
           K     S+S S   SS  +T ++ +  LG H L +PW GLK L G S+K K   +  I+R
Sbjct: 17  KLGGTCSMSLSTTTSSYSKTQHFYLHSLG-HRLFSPWNGLKNL-GFSIKPKKPFFHIIDR 74

Query: 276 KGRCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQD 455
           KGRCKG VVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLR FQPTIRE+QD
Sbjct: 75  KGRCKGNVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLREFQPTIREIQD 134

Query: 456 VSREFKSTLEREIGLDDI 509
           VSREFKSTLEREIGLDDI
Sbjct: 135 VSREFKSTLEREIGLDDI 152


>emb|CBI22684.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  171 bits (433), Expect = 8e-41
 Identities = 94/153 (61%), Positives = 116/153 (75%), Gaps = 2/153 (1%)
 Frame = +3

Query: 69  TSSFLYSTTQNKKKTSSQFSISASLLVSSPQTTNYP--IPQLGRHGLVTPWTGLKQLAGV 242
           T +  +S+    K T    S S+S+ +    + ++   +PQ G  G  + W GL+ L G+
Sbjct: 7   TPTLFFSSPSTTKSTIYALSSSSSIPLPKGPSFHFSTLVPQPGL-GPFSSWNGLRHL-GI 64

Query: 243 SVKQKYVRIERKGRCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLR 422
           SVKQK ++I R+GRCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLR
Sbjct: 65  SVKQKSLKIGRRGRCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLR 124

Query: 423 AFQPTIRELQDVSREFKSTLEREIGLDDIPPSM 521
            FQPTI+ELQ+VS+EFKSTLE+EIG D+I  S+
Sbjct: 125 EFQPTIKELQEVSKEFKSTLEKEIGFDEISSSI 157


>ref|XP_002270827.1| PREDICTED: uncharacterized protein LOC100254207 [Vitis vinifera]
          Length = 261

 Score =  171 bits (433), Expect = 8e-41
 Identities = 94/153 (61%), Positives = 116/153 (75%), Gaps = 2/153 (1%)
 Frame = +3

Query: 69  TSSFLYSTTQNKKKTSSQFSISASLLVSSPQTTNYP--IPQLGRHGLVTPWTGLKQLAGV 242
           T +  +S+    K T    S S+S+ +    + ++   +PQ G  G  + W GL+ L G+
Sbjct: 11  TPTLFFSSPSTTKSTIYALSSSSSIPLPKGPSFHFSTLVPQPGL-GPFSSWNGLRHL-GI 68

Query: 243 SVKQKYVRIERKGRCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLR 422
           SVKQK ++I R+GRCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLR
Sbjct: 69  SVKQKSLKIGRRGRCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLR 128

Query: 423 AFQPTIRELQDVSREFKSTLEREIGLDDIPPSM 521
            FQPTI+ELQ+VS+EFKSTLE+EIG D+I  S+
Sbjct: 129 EFQPTIKELQEVSKEFKSTLEKEIGFDEISSSI 161


>ref|XP_003556118.1| PREDICTED: uncharacterized protein LOC100799045 [Glycine max]
          Length = 236

 Score =  171 bits (432), Expect = 1e-40
 Identities = 90/104 (86%), Positives = 95/104 (91%), Gaps = 1/104 (0%)
 Frame = +3

Query: 198 GLVTPWTGLKQLAGVSVKQK-YVRIERKGRCKGKVVYASLFGVGAPEALVIGVVALLVFG 374
           GL +PW+GLK L G+S K K  + I+RKG CKGKVVYASLFGVGAPEALVIGVVALLVFG
Sbjct: 42  GLFSPWSGLKHL-GISAKPKPLLHIDRKGGCKGKVVYASLFGVGAPEALVIGVVALLVFG 100

Query: 375 PKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDD 506
           PKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDD
Sbjct: 101 PKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDD 144


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