BLASTX nr result

ID: Coptis23_contig00012721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012721
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69808.1| hypothetical protein VITISV_019656 [Vitis vinifera]   303   5e-80
ref|XP_002284835.1| PREDICTED: uncharacterized endoplasmic retic...   301   1e-79
gb|AFK42535.1| unknown [Medicago truncatula]                          288   2e-75
ref|XP_002311311.1| predicted protein [Populus trichocarpa] gi|2...   287   2e-75
ref|XP_002522464.1| conserved hypothetical protein [Ricinus comm...   284   2e-74

>emb|CAN69808.1| hypothetical protein VITISV_019656 [Vitis vinifera]
          Length = 202

 Score =  303 bits (775), Expect = 5e-80
 Identities = 144/202 (71%), Positives = 163/202 (80%), Gaps = 7/202 (3%)
 Frame = -2

Query: 782 MTKTGLFDLEKHFAFYGAYHSNPINIFIHMLFVWPILFTTLVLLYFTPSLFPLPQIA--- 612
           M K GLFDLE+HFAFYGAYHS+P+N+F+HMLFVWP+ FT LVL YFTPS F LPQI    
Sbjct: 1   MGKMGLFDLERHFAFYGAYHSBPVNVFLHMLFVWPLFFTALVLFYFTPSFFILPQIGLLP 60

Query: 611 ----GNLVFNLGFIFTLVYSLFYIALDVKAGSLAAALCFLSWVGGSLLANHLGYSLAWKV 444
                  + N GF+FTL+YSLFY+ LD KAG LAA LCF  WVG S LA++LG+SLAWKV
Sbjct: 61  SGFNHTFLLNFGFLFTLIYSLFYVLLDKKAGCLAALLCFSCWVGSSFLASYLGFSLAWKV 120

Query: 443 VLAAQVFCWIGQFIGHGVFEKRAPALLDNLTQAFVMAPFFVLLEALQMFCGYEPYPGFHA 264
           VLA+Q+FCW GQFIGHGVFEKRAPALLDNL QAF+MAPFFVLLEALQ   GYEPYPGF  
Sbjct: 121 VLASQLFCWTGQFIGHGVFEKRAPALLDNLAQAFIMAPFFVLLEALQTTIGYEPYPGFSK 180

Query: 263 RVKAKIDSEIKEFRDKKQKKIS 198
            VK KI ++IKE+ DKKQKKIS
Sbjct: 181 NVKEKIGADIKEWHDKKQKKIS 202


>ref|XP_002284835.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein
           C16E8.02-like [Vitis vinifera]
          Length = 202

 Score =  301 bits (772), Expect = 1e-79
 Identities = 144/202 (71%), Positives = 163/202 (80%), Gaps = 7/202 (3%)
 Frame = -2

Query: 782 MTKTGLFDLEKHFAFYGAYHSNPINIFIHMLFVWPILFTTLVLLYFTPSLFPLPQIA--- 612
           M K GLFDLE+HFAFYGAYHS+P+N+F+HMLFVWP+ FT LVL YFTPS F LPQI    
Sbjct: 1   MGKMGLFDLERHFAFYGAYHSDPVNVFLHMLFVWPLFFTALVLFYFTPSFFILPQIGLLP 60

Query: 611 ----GNLVFNLGFIFTLVYSLFYIALDVKAGSLAAALCFLSWVGGSLLANHLGYSLAWKV 444
                  + N GF+FTL+YSLFY+ LD KAG LAA LCF  WVG S LA++LG+SLAWKV
Sbjct: 61  SGFNHTFLLNFGFLFTLIYSLFYVLLDKKAGCLAALLCFSCWVGSSFLASYLGFSLAWKV 120

Query: 443 VLAAQVFCWIGQFIGHGVFEKRAPALLDNLTQAFVMAPFFVLLEALQMFCGYEPYPGFHA 264
           VLA+Q+FCW GQFIGHGVFEKRAPALLDNL QAF+MAPFFVLLEALQ   GYEPYPGF  
Sbjct: 121 VLASQLFCWTGQFIGHGVFEKRAPALLDNLAQAFIMAPFFVLLEALQTTIGYEPYPGFSK 180

Query: 263 RVKAKIDSEIKEFRDKKQKKIS 198
            VK KI ++IKE+ DKKQKKIS
Sbjct: 181 NVKEKIGADIKEWHDKKQKKIS 202


>gb|AFK42535.1| unknown [Medicago truncatula]
          Length = 197

 Score =  288 bits (736), Expect = 2e-75
 Identities = 137/196 (69%), Positives = 158/196 (80%), Gaps = 5/196 (2%)
 Frame = -2

Query: 770 GLFDLEKHFAFYGAYHSNPINIFIHMLFVWPILFTTLVLLYFTPSLFPLPQIAGN----- 606
           GL D EKHFAFYG+YHSNP NI IH+LFVWPILFT+L+ LYFTP LF   Q   N     
Sbjct: 2   GLLDQEKHFAFYGSYHSNPTNIIIHILFVWPILFTSLIFLYFTPPLFSPSQTVLNFTHPV 61

Query: 605 LVFNLGFIFTLVYSLFYIALDVKAGSLAAALCFLSWVGGSLLANHLGYSLAWKVVLAAQV 426
           L+FNLGF+F + Y LFY ALD+KAGS  A L FLSWVG S +AN +GY LAWKVVLAAQ+
Sbjct: 62  LIFNLGFVFAVFYGLFYAALDIKAGSFTAVLTFLSWVGASFVANSIGYELAWKVVLAAQL 121

Query: 425 FCWIGQFIGHGVFEKRAPALLDNLTQAFVMAPFFVLLEALQMFCGYEPYPGFHARVKAKI 246
           FCW GQFIGHGVFEKRAPALLDNL QAF+MAPFFV+LE LQ   GYEPYPGF  +V+A+I
Sbjct: 122 FCWTGQFIGHGVFEKRAPALLDNLAQAFLMAPFFVVLEILQSSIGYEPYPGFQKKVQARI 181

Query: 245 DSEIKEFRDKKQKKIS 198
           D+ IKE+++K+QKKIS
Sbjct: 182 DANIKEWKEKQQKKIS 197


>ref|XP_002311311.1| predicted protein [Populus trichocarpa] gi|222851131|gb|EEE88678.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  287 bits (735), Expect = 2e-75
 Identities = 140/199 (70%), Positives = 158/199 (79%), Gaps = 7/199 (3%)
 Frame = -2

Query: 782 MTKTGLFDLEKHFAFYGAYHSNPINIFIHMLFVWPILFTTLVLLYFTPSLFPLPQIAGNL 603
           M K GL DLEKHFAFYGAYHSN INI IHM+FVWPI FT  ++LYFTP LF LPQ+  +L
Sbjct: 1   MGKYGLIDLEKHFAFYGAYHSNSINILIHMIFVWPIFFTACLILYFTPPLFSLPQVQLSL 60

Query: 602 -------VFNLGFIFTLVYSLFYIALDVKAGSLAAALCFLSWVGGSLLANHLGYSLAWKV 444
                  +FN+GF   L+Y+LFYI LD KAGSLAA LC   WV  SL+A  LG+SLAWKV
Sbjct: 61  FGYGVVLLFNVGFFLVLIYALFYICLDPKAGSLAALLCAFCWVASSLVAGWLGFSLAWKV 120

Query: 443 VLAAQVFCWIGQFIGHGVFEKRAPALLDNLTQAFVMAPFFVLLEALQMFCGYEPYPGFHA 264
           VL AQ+ CW GQFIGHGVFEKRAPALLDNL QAF+MAPFFVLLEALQ   GYEPYPGFHA
Sbjct: 121 VLVAQIVCWTGQFIGHGVFEKRAPALLDNLIQAFIMAPFFVLLEALQTSFGYEPYPGFHA 180

Query: 263 RVKAKIDSEIKEFRDKKQK 207
            V+A+ID+EIKE+R+KK K
Sbjct: 181 SVQARIDAEIKEWREKKLK 199


>ref|XP_002522464.1| conserved hypothetical protein [Ricinus communis]
           gi|223538349|gb|EEF39956.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score =  284 bits (726), Expect = 2e-74
 Identities = 135/200 (67%), Positives = 161/200 (80%), Gaps = 5/200 (2%)
 Frame = -2

Query: 782 MTKTGLFDLEKHFAFYGAYHSNPINIFIHMLFVWPILFTTLVLLYFTPSLFPLPQIA--- 612
           M K+G FDLEKHFAFYGAYHSNP+N+ IHM+FVWPI FT L++LYFTPS+F L       
Sbjct: 1   MGKSGFFDLEKHFAFYGAYHSNPVNVLIHMIFVWPIFFTALLILYFTPSVFNLKMSLLCH 60

Query: 611 GNLV--FNLGFIFTLVYSLFYIALDVKAGSLAAALCFLSWVGGSLLANHLGYSLAWKVVL 438
           G++V  FN GF+F L+Y+LFYI LD KAGSLAA LC   WV    LA  LG+SLAWKVVL
Sbjct: 61  GDIVLLFNFGFLFALIYALFYIFLDAKAGSLAALLCAFCWVASCSLARWLGFSLAWKVVL 120

Query: 437 AAQVFCWIGQFIGHGVFEKRAPALLDNLTQAFVMAPFFVLLEALQMFCGYEPYPGFHARV 258
            AQ+ CW GQFIGHGVFEKRAPALLDNL QAF+MAPFFVLLEALQ+F  YEPYPGFHA V
Sbjct: 121 VAQIVCWTGQFIGHGVFEKRAPALLDNLAQAFIMAPFFVLLEALQIFFVYEPYPGFHANV 180

Query: 257 KAKIDSEIKEFRDKKQKKIS 198
           + KI++EI ++++KK+K ++
Sbjct: 181 QVKIEAEINQWQEKKEKLLA 200


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