BLASTX nr result

ID: Coptis23_contig00012718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012718
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25963.1| unknown [Picea sitchensis]                             144   2e-32
ref|XP_002316393.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
ref|XP_002311069.1| predicted protein [Populus trichocarpa] gi|2...   139   6e-31
ref|XP_003633469.1| PREDICTED: uncharacterized protein LOC100854...   138   1e-30
emb|CBI31396.3| unnamed protein product [Vitis vinifera]              138   1e-30

>gb|ABK25963.1| unknown [Picea sitchensis]
          Length = 212

 Score =  144 bits (364), Expect = 2e-32
 Identities = 64/116 (55%), Positives = 86/116 (74%), Gaps = 3/116 (2%)
 Frame = -1

Query: 584 SFSPVTMENNVINSHPQEKKPSAPSTFIGEEKRFNE---NVPTFVNQAAITWHEKRREWV 414
           S SP  MENNV NSH   + PS  ST   EE +      N  TFVN A I W+E+RREW+
Sbjct: 97  SSSPEDMENNVSNSHSMRRNPSVGSTSQAEETQLTNDSTNSTTFVNHALIMWNERRREWL 156

Query: 413 GDQSQKQQTVPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 246
           G++SQ Q  +P++P+ISW+ TY+DLL+T++PF QP+PLPEM+DFLVD+WH+EGL++
Sbjct: 157 GNRSQNQPQMPREPIISWNTTYDDLLATNQPFPQPVPLPEMIDFLVDVWHEEGLYE 212


>ref|XP_002316393.1| predicted protein [Populus trichocarpa] gi|222865433|gb|EEF02564.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  144 bits (363), Expect = 2e-32
 Identities = 69/110 (62%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
 Frame = -1

Query: 566 MENNVINSHPQEKKPSAPSTFIGEEKRFNE---NVPTFVNQAAITWHEKRREWVGDQSQK 396
           ME N + SH  EK+P   ST    E    E   +   F+N AAI WHE RR+W GDQSQ+
Sbjct: 1   MEVNPVRSHSNEKQPLEHSTSTNGEHEHTEKEKSASVFINHAAIAWHESRRKWTGDQSQQ 60

Query: 395 QQTVPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 246
            Q + KDP+ISWS TYEDLLST EPF +PIPLPEMVDFLVDIWHDEGLFD
Sbjct: 61  PQRMIKDPIISWSTTYEDLLSTHEPFPEPIPLPEMVDFLVDIWHDEGLFD 110


>ref|XP_002311069.1| predicted protein [Populus trichocarpa] gi|222850889|gb|EEE88436.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  139 bits (351), Expect = 6e-31
 Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
 Frame = -1

Query: 566 MENNVINSHPQEKKPSAPSTFIGEEKRFNE---NVPTFVNQAAITWHEKRREWVGDQSQK 396
           ME N ++SH  EK+ S  ST    E    E   +   FVN AAI WHE RR+W G+QS++
Sbjct: 1   MEVNSVSSHSNEKRSSEHSTSTNGEHMNTEKEKSTSVFVNHAAIAWHESRRKWTGNQSRQ 60

Query: 395 QQTVPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 246
            Q   KDP+ISWS TYEDLLST EPFS+PIPL EMVDFLVDIWHDEGLFD
Sbjct: 61  PQRTTKDPIISWSTTYEDLLSTQEPFSEPIPLSEMVDFLVDIWHDEGLFD 110


>ref|XP_003633469.1| PREDICTED: uncharacterized protein LOC100854399 [Vitis vinifera]
          Length = 111

 Score =  138 bits (348), Expect = 1e-30
 Identities = 68/107 (63%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
 Frame = -1

Query: 563 ENNVINSHPQEKKPSAPSTFIGEEKRFNE-NVPTFVNQAAITWHEKRREWVGDQSQKQQT 387
           E N   SH  EK+    S    E+K   E +   F+N AAI WH++RREWVGDQSQK Q 
Sbjct: 5   EVNTGGSHSNEKQTLECSASANEQKEPMEVSTFVFINHAAIAWHDRRREWVGDQSQKSQR 64

Query: 386 VPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 246
             KDP+ISWSMTYEDLLST+EPFS+PIPL EMVDFLVDIW DEGL+D
Sbjct: 65  KQKDPIISWSMTYEDLLSTNEPFSEPIPLTEMVDFLVDIWQDEGLYD 111


>emb|CBI31396.3| unnamed protein product [Vitis vinifera]
          Length = 109

 Score =  138 bits (348), Expect = 1e-30
 Identities = 68/107 (63%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
 Frame = -1

Query: 563 ENNVINSHPQEKKPSAPSTFIGEEKRFNE-NVPTFVNQAAITWHEKRREWVGDQSQKQQT 387
           E N   SH  EK+    S    E+K   E +   F+N AAI WH++RREWVGDQSQK Q 
Sbjct: 3   EVNTGGSHSNEKQTLECSASANEQKEPMEVSTFVFINHAAIAWHDRRREWVGDQSQKSQR 62

Query: 386 VPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 246
             KDP+ISWSMTYEDLLST+EPFS+PIPL EMVDFLVDIW DEGL+D
Sbjct: 63  KQKDPIISWSMTYEDLLSTNEPFSEPIPLTEMVDFLVDIWQDEGLYD 109


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