BLASTX nr result

ID: Coptis23_contig00012669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012669
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238351.1| uncharacterized protein LOC100306406 precurs...   234   1e-59
ref|NP_001236342.1| uncharacterized protein LOC100500066 precurs...   233   5e-59
gb|AFK38420.1| unknown [Lotus japonicus]                              232   7e-59
ref|XP_002274525.1| PREDICTED: translocon-associated protein sub...   232   7e-59
ref|XP_002512872.1| translocon-associated protein, beta subunit ...   229   4e-58

>ref|NP_001238351.1| uncharacterized protein LOC100306406 precursor [Glycine max]
           gi|255628433|gb|ACU14561.1| unknown [Glycine max]
          Length = 194

 Score =  234 bits (598), Expect = 1e-59
 Identities = 111/149 (74%), Positives = 134/149 (89%)
 Frame = -1

Query: 708 HKKVSLNRPKSGSDQVSVSIDIYNQGSATAYDVSLTDDSWTPDVFDLLSGNISRTWERLN 529
           HKK SLNR KSG+++VSV+IDIYNQG++TAYDVSL+DDSW  D FD++SG+ S++WERL+
Sbjct: 34  HKKASLNRLKSGAERVSVTIDIYNQGTSTAYDVSLSDDSWPSDAFDVISGSTSKSWERLD 93

Query: 528 AGSIVSHSFVLESKVKGLFYGSPAVIKFRIPTKTALQEAFSTPILPLDILSDRPPEKKFE 349
           AG I+SH+F LE+K KG+F G PAVIKFR+PTK ALQEA+STPILPLD+LSDRPPEKKFE
Sbjct: 94  AGGIISHTFELEAKSKGVFAGEPAVIKFRVPTKAALQEAYSTPILPLDVLSDRPPEKKFE 153

Query: 348 WAKRLLANYGSLVSVISIASLFMYLVATP 262
           WAKRLLA YGSL+SVISI  LF+YLVA+P
Sbjct: 154 WAKRLLAKYGSLISVISIMVLFIYLVASP 182


>ref|NP_001236342.1| uncharacterized protein LOC100500066 precursor [Glycine max]
           gi|255628939|gb|ACU14814.1| unknown [Glycine max]
          Length = 194

 Score =  233 bits (593), Expect = 5e-59
 Identities = 110/149 (73%), Positives = 135/149 (90%)
 Frame = -1

Query: 708 HKKVSLNRPKSGSDQVSVSIDIYNQGSATAYDVSLTDDSWTPDVFDLLSGNISRTWERLN 529
           HKK SLNR KSG+++VSV+IDI+NQG++TAYDVSL+DDSW  D FD++SG+ S++WERL+
Sbjct: 34  HKKASLNRLKSGAERVSVTIDIFNQGTSTAYDVSLSDDSWPSDAFDVISGSTSKSWERLD 93

Query: 528 AGSIVSHSFVLESKVKGLFYGSPAVIKFRIPTKTALQEAFSTPILPLDILSDRPPEKKFE 349
           AG I+SH+F LE+K KG+F G PAVIKFR+PTK+ALQEA+STPILPLD+LSDRPPEKKFE
Sbjct: 94  AGGILSHTFELEAKSKGVFAGEPAVIKFRVPTKSALQEAYSTPILPLDVLSDRPPEKKFE 153

Query: 348 WAKRLLANYGSLVSVISIASLFMYLVATP 262
           WAKRLLA YGSL+SVISI  LF+YLVA+P
Sbjct: 154 WAKRLLAKYGSLISVISIMVLFVYLVASP 182


>gb|AFK38420.1| unknown [Lotus japonicus]
          Length = 198

 Score =  232 bits (592), Expect = 7e-59
 Identities = 112/149 (75%), Positives = 132/149 (88%)
 Frame = -1

Query: 708 HKKVSLNRPKSGSDQVSVSIDIYNQGSATAYDVSLTDDSWTPDVFDLLSGNISRTWERLN 529
           HKK SLNR KSG+++VSVSIDIYNQGS+TAYD+SL DD+W  D+F ++SG+ S++WERL+
Sbjct: 38  HKKASLNRLKSGAERVSVSIDIYNQGSSTAYDISLADDTWPSDLFSIISGSTSKSWERLD 97

Query: 528 AGSIVSHSFVLESKVKGLFYGSPAVIKFRIPTKTALQEAFSTPILPLDILSDRPPEKKFE 349
           AG I+SH+F LE+K KG+F G PAVIKFRIPTK+ALQEAFSTPILPLDIL+DRPPEKK E
Sbjct: 98  AGGILSHTFELEAKTKGVFSGQPAVIKFRIPTKSALQEAFSTPILPLDILADRPPEKKLE 157

Query: 348 WAKRLLANYGSLVSVISIASLFMYLVATP 262
           WAKRLLA YGSL SVISI  LF+YLVATP
Sbjct: 158 WAKRLLAKYGSLFSVISIMVLFVYLVATP 186


>ref|XP_002274525.1| PREDICTED: translocon-associated protein subunit beta isoform 1
           [Vitis vinifera]
          Length = 191

 Score =  232 bits (592), Expect = 7e-59
 Identities = 112/149 (75%), Positives = 133/149 (89%)
 Frame = -1

Query: 708 HKKVSLNRPKSGSDQVSVSIDIYNQGSATAYDVSLTDDSWTPDVFDLLSGNISRTWERLN 529
           HKK SL R KSG+++VSVSIDIYNQGS TAYDVSLTDDSW+ DVF+++SGN S +WERL+
Sbjct: 30  HKKASLTRLKSGAERVSVSIDIYNQGSTTAYDVSLTDDSWSQDVFNIVSGNTSTSWERLD 89

Query: 528 AGSIVSHSFVLESKVKGLFYGSPAVIKFRIPTKTALQEAFSTPILPLDILSDRPPEKKFE 349
           AG ++SH+F LESKV+G+FYG+PAVI FRIPT  ALQEA+STPILPLDIL+ RPPEKKFE
Sbjct: 90  AGGLLSHAFELESKVEGMFYGAPAVITFRIPTTAALQEAYSTPILPLDILAVRPPEKKFE 149

Query: 348 WAKRLLANYGSLVSVISIASLFMYLVATP 262
           WAKRLLA YGS +SVISI S+F+YLVA+P
Sbjct: 150 WAKRLLAKYGSQISVISIVSVFVYLVASP 178


>ref|XP_002512872.1| translocon-associated protein, beta subunit precursor, putative
           [Ricinus communis] gi|223547883|gb|EEF49375.1|
           translocon-associated protein, beta subunit precursor,
           putative [Ricinus communis]
          Length = 208

 Score =  229 bits (585), Expect = 4e-58
 Identities = 111/149 (74%), Positives = 131/149 (87%)
 Frame = -1

Query: 708 HKKVSLNRPKSGSDQVSVSIDIYNQGSATAYDVSLTDDSWTPDVFDLLSGNISRTWERLN 529
           HKK +LNR KSG+++VSVSIDIYNQGS+TAYDVSL DD W  D+FD++SGN S++WERL+
Sbjct: 31  HKKATLNRLKSGAERVSVSIDIYNQGSSTAYDVSLLDDHWPQDIFDVISGNTSQSWERLD 90

Query: 528 AGSIVSHSFVLESKVKGLFYGSPAVIKFRIPTKTALQEAFSTPILPLDILSDRPPEKKFE 349
            G I+SH+F LE KVKGLFYGSPAV+ FRIPTK ALQEAFSTPILPLD+L++RPPEKKFE
Sbjct: 91  VGGILSHTFELEGKVKGLFYGSPAVVTFRIPTKAALQEAFSTPILPLDVLAERPPEKKFE 150

Query: 348 WAKRLLANYGSLVSVISIASLFMYLVATP 262
           W  RLLA YGSL+SVISI  LF+YLVA+P
Sbjct: 151 W--RLLAKYGSLISVISIVVLFVYLVASP 177


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