BLASTX nr result

ID: Coptis23_contig00012664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012664
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322718.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|NP_001059068.1| Os07g0185900 [Oryza sativa Japonica Group] g...    75   4e-12
ref|XP_002517792.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
gb|AAM08779.1|AC016780_9 Hypothetical protein [Oryza sativa] gi|...    74   9e-12
gb|EAY78495.1| hypothetical protein OsI_33587 [Oryza sativa Indi...    74   9e-12

>ref|XP_002322718.1| predicted protein [Populus trichocarpa] gi|222867348|gb|EEF04479.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/85 (49%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = +2

Query: 146 MSKYVELLDMGVRIAARFHSHCPHTARMYYHPPSTVEDQXXXXXXXXYSQHNSNNTSGGN 325
           M KYVELLD GVRIA RF+SHCP TARMYYHPPS  ED              S  T+  +
Sbjct: 1   MGKYVELLDAGVRIAGRFYSHCPQTARMYYHPPSNSEDLHHHHHHGHNGGSGSQATTQDS 60

Query: 326 TDVSN---KAMDGIDTKEFFIYSVV 391
           T V++   KA  G  T +   YSV+
Sbjct: 61  TRVASCGVKAATGFGTTDLAFYSVM 85


>ref|NP_001059068.1| Os07g0185900 [Oryza sativa Japonica Group]
           gi|33146906|dbj|BAC79927.1| unknown protein [Oryza
           sativa Japonica Group] gi|50508335|dbj|BAD30185.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113610604|dbj|BAF20982.1| Os07g0185900 [Oryza sativa
           Japonica Group] gi|125557491|gb|EAZ03027.1| hypothetical
           protein OsI_25168 [Oryza sativa Indica Group]
           gi|125599372|gb|EAZ38948.1| hypothetical protein
           OsJ_23369 [Oryza sativa Japonica Group]
          Length = 80

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
 Frame = +2

Query: 146 MSKYVELLDMGVRIAARFHSHCPHTARMYYHPPSTVEDQXXXXXXXXYSQHNSNNTSGGN 325
           M KYVELLDMGVRIAARFHSHCP TARMYYHPP +             +  +++   GG 
Sbjct: 1   MGKYVELLDMGVRIAARFHSHCPQTARMYYHPPPSSSSSPSSSA----AAGSADGGGGGC 56

Query: 326 TDVSNKAMD--GIDTKEFFIYSVV 391
              + K M     DT E  +Y+VV
Sbjct: 57  AGFAAKRMPRAAADTAEIILYAVV 80


>ref|XP_002517792.1| conserved hypothetical protein [Ricinus communis]
           gi|223543064|gb|EEF44599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 79

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
 Frame = +2

Query: 146 MSKYVELLDMGVRIAARFHSHCPHTARMYYHPPSTVEDQXXXXXXXXYSQHNSNNTSGGN 325
           M KY+E+LD GVRI ARFHSHCP TARMYYHPP+  ++         +  H+   ++   
Sbjct: 1   MGKYMEILDAGVRIVARFHSHCPQTARMYYHPPANSDE---------HHHHHDGGSTATA 51

Query: 326 TDVSN-------KAMDGIDTKEFFIYSV 388
           +D SN       KA   +D KEF I SV
Sbjct: 52  SDGSNRVGFCAPKAAMRMDVKEFIICSV 79


>gb|AAM08779.1|AC016780_9 Hypothetical protein [Oryza sativa] gi|31432089|gb|AAP53774.1|
           hypothetical protein LOC_Os10g28160 [Oryza sativa
           Japonica Group]
          Length = 110

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = +2

Query: 146 MSKYVELLDMGVRIAARFHSHCPHTARMYYHPPSTVED 259
           MS+YVE+LDMGVR+AARFHSHCPHTARMYY PP T  D
Sbjct: 1   MSRYVEMLDMGVRVAARFHSHCPHTARMYYKPPQTTAD 38


>gb|EAY78495.1| hypothetical protein OsI_33587 [Oryza sativa Indica Group]
          Length = 110

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = +2

Query: 146 MSKYVELLDMGVRIAARFHSHCPHTARMYYHPPSTVED 259
           MS+YVE+LDMGVR+AARFHSHCPHTARMYY PP T  D
Sbjct: 1   MSRYVEMLDMGVRVAARFHSHCPHTARMYYKPPQTTAD 38


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