BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012640
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   412   e-113
ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   412   e-113
gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indi...   406   e-111
ref|NP_001149295.1| 40S ribosomal protein SA [Zea mays] gi|19470...   404   e-110
gb|AFW89454.1| 40S ribosomal protein SA [Zea mays]                    403   e-110

>ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  412 bits (1059), Expect = e-113
 Identities = 211/282 (74%), Positives = 228/282 (80%), Gaps = 8/282 (2%)
 Frame = +3

Query: 96  QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 275
           QK  DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTW+KL LAARVIVGIE
Sbjct: 12  QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIE 71

Query: 276 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 455
           NPQDIIVQSAR YGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQ SF+EPRLLILTDPRT
Sbjct: 72  NPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRT 131

Query: 456 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 635
           DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMV QMRG +
Sbjct: 132 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 191

Query: 636 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQGADTQWSNQGVDTQWTADV 815
             G +WDVMVDLFFYREPEEAK++E +E  A PDY      GA    S+     QW   +
Sbjct: 192 RAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD-----QWAGQI 246

Query: 816 GDAQWN-PDLIPSQTVTPAV------VEYTQ-AAVSQEADEW 917
            DAQW  PDLIP+    P V      VE+TQ   V+  +D W
Sbjct: 247 SDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGW 288


>ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  412 bits (1059), Expect = e-113
 Identities = 211/282 (74%), Positives = 228/282 (80%), Gaps = 8/282 (2%)
 Frame = +3

Query: 96  QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 275
           QK  DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTW+KL LAARVIVGIE
Sbjct: 12  QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIE 71

Query: 276 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 455
           NPQDIIVQSAR YGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQ SF+EPRLLILTDPRT
Sbjct: 72  NPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRT 131

Query: 456 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 635
           DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMV QMRG +
Sbjct: 132 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 191

Query: 636 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQGADTQWSNQGVDTQWTADV 815
             G +WDVMVDLFFYREPEEAK++E +E  A PDY      GA    S+     QW   +
Sbjct: 192 RAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD-----QWAGQI 246

Query: 816 GDAQWN-PDLIPSQTVTPAV------VEYTQ-AAVSQEADEW 917
            DAQW  PDLIP+    P V      VE+TQ   V+  +D W
Sbjct: 247 SDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGW 288


>gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indica Group]
          Length = 310

 Score =  406 bits (1044), Expect = e-111
 Identities = 207/296 (69%), Positives = 225/296 (76%), Gaps = 2/296 (0%)
 Frame = +3

Query: 96  QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 275
           Q+ +DIQMMLAA VHLGTKNCD+QMERYV+KRRSDGIFIINLGKTW+KL LAARVIV IE
Sbjct: 16  QREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVAIE 75

Query: 276 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 455
           NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT
Sbjct: 76  NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 135

Query: 456 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 635
           DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMV QMRG +
Sbjct: 136 DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTI 195

Query: 636 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQGADTQWSNQGVDTQWTADV 815
           LPG +WDVMVDLFFYR+PEEAK+QE +E    P+YAA    GA             T + 
Sbjct: 196 LPGHKWDVMVDLFFYRDPEEAKEQEEEEAAVGPEYAAVAEYGAAP-----------TDNW 244

Query: 816 GDAQWNPDLIPSQTVTPAVVEYTQAAVSQEADEWXXXXXXXXXXXTSLPP--PSWD 977
           GD QW  ++ P         E+  A     A+ W              PP  P W+
Sbjct: 245 GDQQWGGEVQPPALPAAPTGEWGAAPAPVAAEGWDAVAVPPAAAAAVAPPAAPGWE 300


>ref|NP_001149295.1| 40S ribosomal protein SA [Zea mays] gi|194708106|gb|ACF88137.1|
           unknown [Zea mays] gi|195626134|gb|ACG34897.1| 40S
           ribosomal protein SA [Zea mays]
          Length = 308

 Score =  404 bits (1037), Expect = e-110
 Identities = 210/278 (75%), Positives = 228/278 (82%), Gaps = 15/278 (5%)
 Frame = +3

Query: 96  QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 275
           QK +DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTWDKL LAARVIV IE
Sbjct: 15  QKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDKLQLAARVIVAIE 74

Query: 276 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 455
           NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT
Sbjct: 75  NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 134

Query: 456 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 635
           DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKG+ SIGCLFWLLARMV QMRG +
Sbjct: 135 DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTI 194

Query: 636 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAA-PGLQGADTQWSNQGVDTQWTAD 812
           LPG +W+VMVDLFFYR+PEEAK+QE +E  A P++AA    QGAD QW       QWT+D
Sbjct: 195 LPGHKWEVMVDLFFYRDPEEAKEQE-EEAAAAPEFAAVTDYQGAD-QWGGD----QWTSD 248

Query: 813 VG-------DAQWN--PDLIPS-----QTVTPAVVEYT 884
           V         A W   P  +P+     QTV P  V+ T
Sbjct: 249 VAAPPVAPTGADWGAAPASVPTGDGWDQTVAPVPVDGT 286


>gb|AFW89454.1| 40S ribosomal protein SA [Zea mays]
          Length = 308

 Score =  403 bits (1036), Expect = e-110
 Identities = 210/278 (75%), Positives = 228/278 (82%), Gaps = 15/278 (5%)
 Frame = +3

Query: 96  QKREDIQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 275
           QK +DIQMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTWDKL LAARVIV IE
Sbjct: 15  QKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDKLQLAARVIVAIE 74

Query: 276 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 455
           NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT
Sbjct: 75  NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 134

Query: 456 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 635
           DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKG+ SIGCLFWLLARMV QMRG +
Sbjct: 135 DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTI 194

Query: 636 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAA-PGLQGADTQWSNQGVDTQWTAD 812
           LPG +W+VMVDLFFYR+PEEAK+QE +E  A P++AA    QGAD QW       QWT+D
Sbjct: 195 LPGHKWEVMVDLFFYRDPEEAKEQE-EEAAAAPEFAAVTDYQGAD-QWGGD----QWTSD 248

Query: 813 VG-------DAQWN--PDLIPS-----QTVTPAVVEYT 884
           V         A W   P  +P+     QTV P  V+ T
Sbjct: 249 VAAPPVAPTGADWGAAPAPVPTGDGWDQTVAPVPVDGT 286