BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012635
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251...   426   e-117
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795...   417   e-114
ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis s...   414   e-113
ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]   409   e-112
ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3...   395   e-107

>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
            gi|297743697|emb|CBI36580.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  426 bits (1096), Expect = e-117
 Identities = 214/349 (61%), Positives = 263/349 (75%), Gaps = 5/349 (1%)
 Frame = +3

Query: 93   AQNLEIHKIPQSKYIDSIRWLPTVSAFDKFITMALYDSDSDENFVEIHSLNTSIPPFLTH 272
            + +L+IH++PQS+YID++R+LP  S  D+F  +AL+D+ S    ++IHSL  S PP L  
Sbjct: 9    SHSLQIHRLPQSQYIDAVRFLPAFSGLDRFAVLALFDTHSSSPSLQIHSLPKSTPPSLNL 68

Query: 273  QSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLEN----GP 440
            QSS +  SR+SSL +S S +KP+IAASTF GSLH L ++  D +++SE ++ E     G 
Sbjct: 69   QSSLSLSSRVSSLSLSLSAHKPLIAASTFSGSLHILLLD-FDASVQSEFSVPEKSLHVGA 127

Query: 441  ISGIDLVENGSKCVCVGGDGRVSLVTVGD-SRLEKECVFDSQGLVSYNAAKWASPSEFAT 617
            IS +DL E+G +CV VG DGRV+LV  GD SRL    V+DS GLVSY AAKWASP+EFAT
Sbjct: 128  ISCVDLQESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWASPTEFAT 187

Query: 618  GGLGFSLQWWDQRKPGGPVSQFKGGWTSGGASGIVHSIDIHPSRKHICVAGGSLGTVFAW 797
            GG GF LQWWD RKPGGPVSQFKG W     SGIVHSIDIHPSRKH C+AGGSLGTVFAW
Sbjct: 188  GGFGFGLQWWDLRKPGGPVSQFKGNWAQRTTSGIVHSIDIHPSRKHTCLAGGSLGTVFAW 247

Query: 798  DLRWQQQPILLSGIGXXXXXXXXXXXXXVWEVQYDCYKQSTNVNSMSSAQILSVLMCSED 977
            DLRWQQQPI+LSG+G             VWEV+YD Y +++N  +MSS++IL  ++CSED
Sbjct: 248  DLRWQQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPAMLCSED 307

Query: 978  GILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLEWESIAFITR 1124
            GILAVVEQGEE  E+LAEPCAINS DI+ QNPSDVICSLEWESIA ++R
Sbjct: 308  GILAVVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESIAILSR 356


>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
          Length = 346

 Score =  417 bits (1071), Expect = e-114
 Identities = 210/349 (60%), Positives = 252/349 (72%), Gaps = 5/349 (1%)
 Frame = +3

Query: 93   AQNLEIHKIPQSKYIDSIRWLPTVSAFDKFITMALYDSDSDENFVEIHSLNTSIPPFLTH 272
            A    I + PQ +Y+D++RWLP  SAFD+F  +AL+D DSD + +EIH+LN + P  L  
Sbjct: 3    AATTAIQRFPQHRYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHALNQN-PFSLEP 61

Query: 273  QSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLENG----P 440
             SSW+SPSR+SSLK S    KP+I AST  GSLHFLF + +D ++ SE++L E      P
Sbjct: 62   HSSWSSPSRVSSLKPSHFLQKPLIVASTSSGSLHFLFSDSSDASLLSEVSLPEGALHSLP 121

Query: 441  ISGIDLVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASPSEFATG 620
             S +DL++ G +CV VG DG+V+LV +GDS L    +FDS GLVSY A +WASP EFATG
Sbjct: 122  ASCVDLMDGGVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWASPMEFATG 181

Query: 621  GLGFSLQWWDQRKPGGPVSQFKGGWTSGGASGIVHSIDIHPSRKHICVAGGSLGTVFAWD 800
            G GF LQWWDQRKPGGPVSQFKG W     SGIVHSIDIHPSRKH C+AGGSLGTVFAWD
Sbjct: 182  GFGFGLQWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWD 241

Query: 801  LRWQQQPILLSGIGXXXXXXXXXXXXXVWEVQYD-CYKQSTNVNSMSSAQILSVLMCSED 977
            LRWQQQPI+LSG G             VWEVQYD C K +T     SS +IL  ++CSED
Sbjct: 242  LRWQQQPIILSGAGAANTAVQSISESEVWEVQYDRCIKSNT-----SSTRILPSMICSED 296

Query: 978  GILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLEWESIAFITR 1124
            GIL V+EQGEE  E+LAEPCAINS DI+  NPSDVICSLEWE++A +TR
Sbjct: 297  GILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 345


>ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis sativus]
            gi|449511548|ref|XP_004163987.1| PREDICTED: nucleoporin
            Nup43-like [Cucumis sativus]
          Length = 350

 Score =  414 bits (1065), Expect = e-113
 Identities = 204/347 (58%), Positives = 253/347 (72%), Gaps = 4/347 (1%)
 Frame = +3

Query: 96   QNLEIHKIPQSKYIDSIRWLPTVSAFDKFITMALYDSDSDENFVEIHSLNTSIPPFLTHQ 275
            Q  +IH+ PQ KY+D +RWLP +SAF +F  +AL+DSDSD + +EIHSL T  P  +   
Sbjct: 8    QQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSL-TQNPLDIVPH 66

Query: 276  SSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELA----LLENGPI 443
            S+W SPSR+SSLK SQ    P++ AST+ GSLH L V P + +++SEL+    +L +GPI
Sbjct: 67   STWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKMLHDGPI 126

Query: 444  SGIDLVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASPSEFATGG 623
            S +D+++ G +C+ V  DGRVSLV+VG+S L    +FDS GLVSYNA KWASP+EF TGG
Sbjct: 127  SCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGG 186

Query: 624  LGFSLQWWDQRKPGGPVSQFKGGWTSGGASGIVHSIDIHPSRKHICVAGGSLGTVFAWDL 803
             GFSLQWWDQRKPGG VSQFK  W    ASGIVH IDIHPSRKH C+AGGS GTVFAWDL
Sbjct: 187  CGFSLQWWDQRKPGGAVSQFKANW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDL 242

Query: 804  RWQQQPILLSGIGXXXXXXXXXXXXXVWEVQYDCYKQSTNVNSMSSAQILSVLMCSEDGI 983
            R QQQPI+LSG+              VWEV YD Y +S N+  MSS QIL  ++CSEDGI
Sbjct: 243  RSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSEDGI 302

Query: 984  LAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLEWESIAFITR 1124
            L  +EQG+E  E+LAEPCAIN  DIN Q+PS+VIC+LEWES+A ++R
Sbjct: 303  LTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR 349


>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
          Length = 347

 Score =  409 bits (1052), Expect = e-112
 Identities = 209/347 (60%), Positives = 248/347 (71%), Gaps = 8/347 (2%)
 Frame = +3

Query: 108  IHKIPQSKYIDSIRWLPTVSAFDKFITMALYDSDSDENFVEIHSLNTSIPPFLTHQSSWA 287
            I + PQ KY+D++RWLP  SAFD+F  +AL+D DSD + +EIHSLN + P  L   SSW+
Sbjct: 6    IQRFPQHKYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHSLNPN-PLSLEPHSSWS 64

Query: 288  SPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLENG----PISGID 455
            SPSR+SSLK S    KP+I AST  GSLHFLF + +   +ESE+++ E      P S +D
Sbjct: 65   SPSRVSSLKASHFLQKPLIVASTSSGSLHFLFSDSSVATLESEVSIPEGALHSVPASCVD 124

Query: 456  LVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASPSEFATGGLGFS 635
            L++ G +CV VG DG+V+LV +GDS L    +FDS GLVSY A  WASP EFATGG GF 
Sbjct: 125  LLDGGVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASPMEFATGGYGFG 184

Query: 636  LQWWDQRKPGGPVSQFKGGWTSGGASGIVHSIDIHPSRKHICVAGGSLGTVFAWDLRWQQ 815
            L WWDQRKPGGPVSQFKG W     SGIVHSIDIHPSRKH C+AGGSLGTVFAWDLRWQQ
Sbjct: 185  LHWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQ 244

Query: 816  QPILLSGIG---XXXXXXXXXXXXXVWEVQYD-CYKQSTNVNSMSSAQILSVLMCSEDGI 983
            QPI+LSG G                VWEVQYD C K +T     SS +IL  ++CSEDGI
Sbjct: 245  QPIILSGAGAGAGGNTAVQSISESEVWEVQYDRCIKPNT-----SSTRILPSMICSEDGI 299

Query: 984  LAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLEWESIAFITR 1124
            L V+EQGEE  E+LAEPCAINS DI+  NPSDVICSLEWE++A +TR
Sbjct: 300  LGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 346


>ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1|
            Nucleoporin Nup43 [Medicago truncatula]
          Length = 351

 Score =  395 bits (1015), Expect = e-107
 Identities = 208/354 (58%), Positives = 246/354 (69%), Gaps = 9/354 (2%)
 Frame = +3

Query: 90   VAQNLEIHKIPQSKYIDSIRWLPTVSAFDKFITMALYDSDSDENFVEIHSLNTSIPPFLT 269
            V  N EIH+ PQ KYID++RWLP +SAF++F  +A  D DS+ + +EIHS   + P    
Sbjct: 3    VTANSEIHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHSFKPN-PLSFE 61

Query: 270  HQSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLENG-PIS 446
             QSSW SPS ISS+K SQ   K +IA+ST  GSLHFLF +  D  + SE+++ EN   + 
Sbjct: 62   FQSSWTSPSPISSIKSSQFLQKSIIASSTSSGSLHFLFADSTDARLVSEVSVPENELHLE 121

Query: 447  G---IDLVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASPSEFAT 617
            G   IDL++ G +CV VG DGR++LVTVGDS L    +FDS GLVSY + KWASP EFAT
Sbjct: 122  GKCCIDLMDGGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASPVEFAT 181

Query: 618  GGLGFSLQWWDQRKPGGPVSQFKGGWTSGGASGIVHSIDIHPSRKHICVAGGSLGTVFAW 797
            GG GF L WWDQRKPGGPVSQFKG W     SGIVHSIDIHPSRKH C+A GSLGTV AW
Sbjct: 182  GGYGFGLHWWDQRKPGGPVSQFKGNWDKNLNSGIVHSIDIHPSRKHTCLAAGSLGTVLAW 241

Query: 798  DLRWQQQPILLSGI----GXXXXXXXXXXXXXVWEVQYD-CYKQSTNVNSMSSAQILSVL 962
            DLR QQQPI+LSG     G             VWEVQYD C K +T     SS +IL  +
Sbjct: 242  DLRMQQQPIILSGTGAGDGAGNTAVQSISESEVWEVQYDRCIKSNT-----SSTRILPAM 296

Query: 963  MCSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLEWESIAFITR 1124
            +CSEDGIL V+EQGEE  E+LAEPCAINS DI+  NP DVICSLEWES+A +TR
Sbjct: 297  ICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPLDVICSLEWESVAILTR 350