BLASTX nr result
ID: Coptis23_contig00012631
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012631
(959 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267... 257 3e-66
emb|CBI33981.3| unnamed protein product [Vitis vinifera] 257 3e-66
gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana] 237 4e-60
ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana] ... 237 4e-60
dbj|BAE98499.1| hypothetical protein [Arabidopsis thaliana] 237 4e-60
>ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera]
Length = 1070
Score = 257 bits (656), Expect = 3e-66
Identities = 129/210 (61%), Positives = 158/210 (75%)
Frame = -2
Query: 937 FMDKVSSAELRLDPAQGAKTRFLMELIRLCEVLKEKVLVFSHVRAPFCIIKDQLNHHFNW 758
F D+ +++L+P G KT+FLM IR E + EKVLVFS P + DQL +HF+W
Sbjct: 843 FFDQTKLEKIKLNPDIGVKTKFLMAFIRFSETMNEKVLVFSQFLDPLTYLMDQLKYHFHW 902
Query: 757 TEGEEVLKMDGDLDMKNRQSLINLFNDPCSKAKVLLASTKTCREGISLIGASRVVLLDVV 578
G+EVL MDG D+K RQS IN FNDP S+ +VLLASTK C EGISL+GASRV+LLDVV
Sbjct: 903 IVGKEVLYMDGQRDVKQRQSSINTFNDPASQVRVLLASTKACSEGISLVGASRVILLDVV 962
Query: 577 WNPSVERQAISRAYRLGQKKVVYTYRLLTSGTMEESKYDRQVEKDHLSELVFSSAEGTGN 398
WNPSVERQAISRAYRLGQ+KVVY Y LLTSGTMEE KY RQ +KD LSELVFSS + T
Sbjct: 963 WNPSVERQAISRAYRLGQRKVVYIYHLLTSGTMEEEKYCRQAKKDRLSELVFSSKDKTSA 1022
Query: 397 KEKDTLSIQDDRILEEMVGNRKLRDVFNRI 308
K + ++ +D+ILEEMV + KL+D+F++I
Sbjct: 1023 GNKISSTVSEDKILEEMVQHNKLKDMFDKI 1052
>emb|CBI33981.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 257 bits (656), Expect = 3e-66
Identities = 129/210 (61%), Positives = 158/210 (75%)
Frame = -2
Query: 937 FMDKVSSAELRLDPAQGAKTRFLMELIRLCEVLKEKVLVFSHVRAPFCIIKDQLNHHFNW 758
F D+ +++L+P G KT+FLM IR E + EKVLVFS P + DQL +HF+W
Sbjct: 327 FFDQTKLEKIKLNPDIGVKTKFLMAFIRFSETMNEKVLVFSQFLDPLTYLMDQLKYHFHW 386
Query: 757 TEGEEVLKMDGDLDMKNRQSLINLFNDPCSKAKVLLASTKTCREGISLIGASRVVLLDVV 578
G+EVL MDG D+K RQS IN FNDP S+ +VLLASTK C EGISL+GASRV+LLDVV
Sbjct: 387 IVGKEVLYMDGQRDVKQRQSSINTFNDPASQVRVLLASTKACSEGISLVGASRVILLDVV 446
Query: 577 WNPSVERQAISRAYRLGQKKVVYTYRLLTSGTMEESKYDRQVEKDHLSELVFSSAEGTGN 398
WNPSVERQAISRAYRLGQ+KVVY Y LLTSGTMEE KY RQ +KD LSELVFSS + T
Sbjct: 447 WNPSVERQAISRAYRLGQRKVVYIYHLLTSGTMEEEKYCRQAKKDRLSELVFSSKDKTSA 506
Query: 397 KEKDTLSIQDDRILEEMVGNRKLRDVFNRI 308
K + ++ +D+ILEEMV + KL+D+F++I
Sbjct: 507 GNKISSTVSEDKILEEMVQHNKLKDMFDKI 536
>gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]
Length = 1465
Score = 237 bits (604), Expect = 4e-60
Identities = 126/222 (56%), Positives = 157/222 (70%), Gaps = 4/222 (1%)
Frame = -2
Query: 955 SKSENPFMDKVSSAEL---RLDPAQGAKTRFLMELIRLCEVLKEKVLVFSHVRAPFCIIK 785
S+ E +D+ A+L RLDP Q KTRFLME + LCEV+KEKVLVFS P +I
Sbjct: 1228 SEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIM 1287
Query: 784 DQLNHHFNWTEGEEVLKMDGDLDMKNRQSLINLFNDPCSKAKVLLASTKTCREGISLIGA 605
L F W GEEVL M G L+ K RQ+LIN FNDP SKAKV LASTK C EGISL+GA
Sbjct: 1288 KHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGA 1347
Query: 604 SRVVLLDVVWNPSVERQAISRAYRLGQKKVVYTYRLLTSGTMEESKYDRQVEKDHLSELV 425
SRV+LLDVVWNP+VERQAISRAYR+GQK++VYTY L+ GT E KY +Q +KD +SELV
Sbjct: 1348 SRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELV 1407
Query: 424 FS-SAEGTGNKEKDTLSIQDDRILEEMVGNRKLRDVFNRIYV 302
F+ S+ KEK ++ +D++L+ MV + KL D+F+ + V
Sbjct: 1408 FACSSRHDKGKEKIAEAVTEDKVLDTMVEHSKLGDMFDNLIV 1449
>ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana]
gi|332189724|gb|AEE27845.1| chromatin remodeling 31
[Arabidopsis thaliana]
Length = 1410
Score = 237 bits (604), Expect = 4e-60
Identities = 126/222 (56%), Positives = 157/222 (70%), Gaps = 4/222 (1%)
Frame = -2
Query: 955 SKSENPFMDKVSSAEL---RLDPAQGAKTRFLMELIRLCEVLKEKVLVFSHVRAPFCIIK 785
S+ E +D+ A+L RLDP Q KTRFLME + LCEV+KEKVLVFS P +I
Sbjct: 1173 SEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIM 1232
Query: 784 DQLNHHFNWTEGEEVLKMDGDLDMKNRQSLINLFNDPCSKAKVLLASTKTCREGISLIGA 605
L F W GEEVL M G L+ K RQ+LIN FNDP SKAKV LASTK C EGISL+GA
Sbjct: 1233 KHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGA 1292
Query: 604 SRVVLLDVVWNPSVERQAISRAYRLGQKKVVYTYRLLTSGTMEESKYDRQVEKDHLSELV 425
SRV+LLDVVWNP+VERQAISRAYR+GQK++VYTY L+ GT E KY +Q +KD +SELV
Sbjct: 1293 SRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELV 1352
Query: 424 FS-SAEGTGNKEKDTLSIQDDRILEEMVGNRKLRDVFNRIYV 302
F+ S+ KEK ++ +D++L+ MV + KL D+F+ + V
Sbjct: 1353 FACSSRHDKGKEKIAEAVTEDKVLDTMVEHSKLGDMFDNLIV 1394
>dbj|BAE98499.1| hypothetical protein [Arabidopsis thaliana]
Length = 1410
Score = 237 bits (604), Expect = 4e-60
Identities = 126/222 (56%), Positives = 157/222 (70%), Gaps = 4/222 (1%)
Frame = -2
Query: 955 SKSENPFMDKVSSAEL---RLDPAQGAKTRFLMELIRLCEVLKEKVLVFSHVRAPFCIIK 785
S+ E +D+ A+L RLDP Q KTRFLME + LCEV+KEKVLVFS P +I
Sbjct: 1173 SEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIM 1232
Query: 784 DQLNHHFNWTEGEEVLKMDGDLDMKNRQSLINLFNDPCSKAKVLLASTKTCREGISLIGA 605
L F W GEEVL M G L+ K RQ+LIN FNDP SKAKV LASTK C EGISL+GA
Sbjct: 1233 KHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGA 1292
Query: 604 SRVVLLDVVWNPSVERQAISRAYRLGQKKVVYTYRLLTSGTMEESKYDRQVEKDHLSELV 425
SRV+LLDVVWNP+VERQAISRAYR+GQK++VYTY L+ GT E KY +Q +KD +SELV
Sbjct: 1293 SRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELV 1352
Query: 424 FS-SAEGTGNKEKDTLSIQDDRILEEMVGNRKLRDVFNRIYV 302
F+ S+ KEK ++ +D++L+ MV + KL D+F+ + V
Sbjct: 1353 FACSSRHDKGKEKIAEAVTEDKVLDTMVEHSKLGDMFDNLIV 1394