BLASTX nr result

ID: Coptis23_contig00012603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012603
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273927.1| PREDICTED: syntaxin-41 [Vitis vinifera] gi|2...    80   3e-24
emb|CAN62995.1| hypothetical protein VITISV_021620 [Vitis vinifera]    80   3e-24
ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]...    79   3e-24
ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|...    78   7e-22
ref|XP_002512481.1| syntaxin, putative [Ricinus communis] gi|223...    79   7e-22

>ref|XP_002273927.1| PREDICTED: syntaxin-41 [Vitis vinifera]
           gi|297743940|emb|CBI36910.3| unnamed protein product
           [Vitis vinifera]
          Length = 318

 Score = 79.7 bits (195), Expect(2) = 3e-24
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = +1

Query: 25  SLATDLQNLSVDLRKKQSTYLKHLRQQKEGEDGVDLEMNLNENR 156
           SLATDLQNLS++LRK+QSTYLK LRQQKEG DGVDLEMNLNEN+
Sbjct: 154 SLATDLQNLSLELRKRQSTYLKRLRQQKEGHDGVDLEMNLNENK 197



 Score = 58.2 bits (139), Expect(2) = 3e-24
 Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 49/99 (49%)
 Frame = +2

Query: 164 LEVDDFSDLGFNEHQVSELKKSKAFTVEREKEINQ------------------------- 268
           L+ D+F D+GFNEHQ+++LKKS+ FT EREKEI Q                         
Sbjct: 200 LDDDEFGDMGFNEHQMAKLKKSEKFTAEREKEIRQVVESVNELAQIMKDLSVLVIDQGTI 259

Query: 269 ------------------------AERTQRKGGMVCCAT 313
                                   AERTQRKGGMV CAT
Sbjct: 260 VDRIDYNIQSVSASVEEGFKQLEKAERTQRKGGMVTCAT 298


>emb|CAN62995.1| hypothetical protein VITISV_021620 [Vitis vinifera]
          Length = 318

 Score = 79.7 bits (195), Expect(2) = 3e-24
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = +1

Query: 25  SLATDLQNLSVDLRKKQSTYLKHLRQQKEGEDGVDLEMNLNENR 156
           SLATDLQNLS++LRK+QSTYLK LRQQKEG DGVDLEMNLNEN+
Sbjct: 154 SLATDLQNLSLELRKRQSTYLKRLRQQKEGHDGVDLEMNLNENK 197



 Score = 58.2 bits (139), Expect(2) = 3e-24
 Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 49/99 (49%)
 Frame = +2

Query: 164 LEVDDFSDLGFNEHQVSELKKSKAFTVEREKEINQ------------------------- 268
           L+ D+F D+GFNEHQ+++LKKS+ FT EREKEI Q                         
Sbjct: 200 LDDDEFGDMGFNEHQMAKLKKSEKFTAEREKEIRQVVESVNELAQIMKDLSVLVIDQGTI 259

Query: 269 ------------------------AERTQRKGGMVCCAT 313
                                   AERTQRKGGMV CAT
Sbjct: 260 VDRIDYNIQSVSASVEEGFKQLEKAERTQRKGGMVTCAT 298


>ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]
           gi|296089745|emb|CBI39564.3| unnamed protein product
           [Vitis vinifera]
          Length = 327

 Score = 79.0 bits (193), Expect(2) = 3e-24
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = +1

Query: 25  SLATDLQNLSVDLRKKQSTYLKHLRQQKEGEDGVDLEMNLNENRS 159
           SLATDLQNLS++LRKKQS+YLK LRQQKEG+DGVDLEMNLN N+S
Sbjct: 163 SLATDLQNLSMELRKKQSSYLKRLRQQKEGQDGVDLEMNLNGNKS 207



 Score = 58.5 bits (140), Expect(2) = 3e-24
 Identities = 37/98 (37%), Positives = 45/98 (45%), Gaps = 49/98 (50%)
 Frame = +2

Query: 167 EVDDFSDLGFNEHQVSELKKSKAFTVEREKEINQ-------------------------- 268
           E D+FSDLGFNEHQ+++LKK++AFT ERE+EI Q                          
Sbjct: 210 EDDEFSDLGFNEHQMTKLKKNEAFTAEREREIQQVVESVNELAQIMKDLSVLVIDQGTIV 269

Query: 269 -----------------------AERTQRKGGMVCCAT 313
                                  AERTQ+KGGMV CAT
Sbjct: 270 DRIDYNIQNVAASVEEGFKQLQKAERTQKKGGMVMCAT 307


>ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|gb|AES61446.1| Syntaxin
           [Medicago truncatula]
          Length = 376

 Score = 77.8 bits (190), Expect(2) = 7e-22
 Identities = 37/47 (78%), Positives = 44/47 (93%)
 Frame = +1

Query: 25  SLATDLQNLSVDLRKKQSTYLKHLRQQKEGEDGVDLEMNLNENRSQF 165
           SLATDLQ+LSVDLRKKQSTYLK LRQQKEG DGVDLE+N+N ++S++
Sbjct: 161 SLATDLQSLSVDLRKKQSTYLKRLRQQKEGHDGVDLEINMNGSKSKY 207



 Score = 52.0 bits (123), Expect(2) = 7e-22
 Identities = 35/98 (35%), Positives = 43/98 (43%), Gaps = 49/98 (50%)
 Frame = +2

Query: 167 EVDDFSDLGFNEHQVSELKKSKAFTVEREKEINQ-------------------------- 268
           E DD  ++ FNEHQ+++LKKS+AFTVEREKEI Q                          
Sbjct: 208 EDDDLDNMIFNEHQMAKLKKSEAFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIV 267

Query: 269 -----------------------AERTQRKGGMVCCAT 313
                                  AERTQ+KGGMV CA+
Sbjct: 268 DRIDYNIQNVATTVEDGLKQLQKAERTQKKGGMVMCAS 305


>ref|XP_002512481.1| syntaxin, putative [Ricinus communis] gi|223548442|gb|EEF49933.1|
           syntaxin, putative [Ricinus communis]
          Length = 323

 Score = 79.0 bits (193), Expect(2) = 7e-22
 Identities = 38/46 (82%), Positives = 44/46 (95%)
 Frame = +1

Query: 25  SLATDLQNLSVDLRKKQSTYLKHLRQQKEGEDGVDLEMNLNENRSQ 162
           SLATDLQNLS++LRKKQSTYLK LRQQKEG+DGVDLEMNLN ++S+
Sbjct: 159 SLATDLQNLSMELRKKQSTYLKRLRQQKEGQDGVDLEMNLNGSKSR 204



 Score = 50.8 bits (120), Expect(2) = 7e-22
 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 49/99 (49%)
 Frame = +2

Query: 164 LEVDDFSDLGFNEHQVSELKKSKAFTVEREKEINQ------------------------- 268
           ++ DD  D+ F+EHQ+++LKKS+AFTVERE+EI Q                         
Sbjct: 205 IDDDDLDDMVFSEHQMAKLKKSEAFTVEREREIQQVVESVNELAQIMKDLSVLVIDQGTI 264

Query: 269 ------------------------AERTQRKGGMVCCAT 313
                                   AERTQ++GGMV CAT
Sbjct: 265 VDRIDYNIQNVATTVEEGLKQLQKAERTQKQGGMVMCAT 303


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