BLASTX nr result
ID: Coptis23_contig00012603
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00012603 (652 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273927.1| PREDICTED: syntaxin-41 [Vitis vinifera] gi|2... 80 3e-24 emb|CAN62995.1| hypothetical protein VITISV_021620 [Vitis vinifera] 80 3e-24 ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]... 79 3e-24 ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|... 78 7e-22 ref|XP_002512481.1| syntaxin, putative [Ricinus communis] gi|223... 79 7e-22 >ref|XP_002273927.1| PREDICTED: syntaxin-41 [Vitis vinifera] gi|297743940|emb|CBI36910.3| unnamed protein product [Vitis vinifera] Length = 318 Score = 79.7 bits (195), Expect(2) = 3e-24 Identities = 38/44 (86%), Positives = 42/44 (95%) Frame = +1 Query: 25 SLATDLQNLSVDLRKKQSTYLKHLRQQKEGEDGVDLEMNLNENR 156 SLATDLQNLS++LRK+QSTYLK LRQQKEG DGVDLEMNLNEN+ Sbjct: 154 SLATDLQNLSLELRKRQSTYLKRLRQQKEGHDGVDLEMNLNENK 197 Score = 58.2 bits (139), Expect(2) = 3e-24 Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 49/99 (49%) Frame = +2 Query: 164 LEVDDFSDLGFNEHQVSELKKSKAFTVEREKEINQ------------------------- 268 L+ D+F D+GFNEHQ+++LKKS+ FT EREKEI Q Sbjct: 200 LDDDEFGDMGFNEHQMAKLKKSEKFTAEREKEIRQVVESVNELAQIMKDLSVLVIDQGTI 259 Query: 269 ------------------------AERTQRKGGMVCCAT 313 AERTQRKGGMV CAT Sbjct: 260 VDRIDYNIQSVSASVEEGFKQLEKAERTQRKGGMVTCAT 298 >emb|CAN62995.1| hypothetical protein VITISV_021620 [Vitis vinifera] Length = 318 Score = 79.7 bits (195), Expect(2) = 3e-24 Identities = 38/44 (86%), Positives = 42/44 (95%) Frame = +1 Query: 25 SLATDLQNLSVDLRKKQSTYLKHLRQQKEGEDGVDLEMNLNENR 156 SLATDLQNLS++LRK+QSTYLK LRQQKEG DGVDLEMNLNEN+ Sbjct: 154 SLATDLQNLSLELRKRQSTYLKRLRQQKEGHDGVDLEMNLNENK 197 Score = 58.2 bits (139), Expect(2) = 3e-24 Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 49/99 (49%) Frame = +2 Query: 164 LEVDDFSDLGFNEHQVSELKKSKAFTVEREKEINQ------------------------- 268 L+ D+F D+GFNEHQ+++LKKS+ FT EREKEI Q Sbjct: 200 LDDDEFGDMGFNEHQMAKLKKSEKFTAEREKEIRQVVESVNELAQIMKDLSVLVIDQGTI 259 Query: 269 ------------------------AERTQRKGGMVCCAT 313 AERTQRKGGMV CAT Sbjct: 260 VDRIDYNIQSVSASVEEGFKQLEKAERTQRKGGMVTCAT 298 >ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera] gi|296089745|emb|CBI39564.3| unnamed protein product [Vitis vinifera] Length = 327 Score = 79.0 bits (193), Expect(2) = 3e-24 Identities = 38/45 (84%), Positives = 43/45 (95%) Frame = +1 Query: 25 SLATDLQNLSVDLRKKQSTYLKHLRQQKEGEDGVDLEMNLNENRS 159 SLATDLQNLS++LRKKQS+YLK LRQQKEG+DGVDLEMNLN N+S Sbjct: 163 SLATDLQNLSMELRKKQSSYLKRLRQQKEGQDGVDLEMNLNGNKS 207 Score = 58.5 bits (140), Expect(2) = 3e-24 Identities = 37/98 (37%), Positives = 45/98 (45%), Gaps = 49/98 (50%) Frame = +2 Query: 167 EVDDFSDLGFNEHQVSELKKSKAFTVEREKEINQ-------------------------- 268 E D+FSDLGFNEHQ+++LKK++AFT ERE+EI Q Sbjct: 210 EDDEFSDLGFNEHQMTKLKKNEAFTAEREREIQQVVESVNELAQIMKDLSVLVIDQGTIV 269 Query: 269 -----------------------AERTQRKGGMVCCAT 313 AERTQ+KGGMV CAT Sbjct: 270 DRIDYNIQNVAASVEEGFKQLQKAERTQKKGGMVMCAT 307 >ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|gb|AES61446.1| Syntaxin [Medicago truncatula] Length = 376 Score = 77.8 bits (190), Expect(2) = 7e-22 Identities = 37/47 (78%), Positives = 44/47 (93%) Frame = +1 Query: 25 SLATDLQNLSVDLRKKQSTYLKHLRQQKEGEDGVDLEMNLNENRSQF 165 SLATDLQ+LSVDLRKKQSTYLK LRQQKEG DGVDLE+N+N ++S++ Sbjct: 161 SLATDLQSLSVDLRKKQSTYLKRLRQQKEGHDGVDLEINMNGSKSKY 207 Score = 52.0 bits (123), Expect(2) = 7e-22 Identities = 35/98 (35%), Positives = 43/98 (43%), Gaps = 49/98 (50%) Frame = +2 Query: 167 EVDDFSDLGFNEHQVSELKKSKAFTVEREKEINQ-------------------------- 268 E DD ++ FNEHQ+++LKKS+AFTVEREKEI Q Sbjct: 208 EDDDLDNMIFNEHQMAKLKKSEAFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIV 267 Query: 269 -----------------------AERTQRKGGMVCCAT 313 AERTQ+KGGMV CA+ Sbjct: 268 DRIDYNIQNVATTVEDGLKQLQKAERTQKKGGMVMCAS 305 >ref|XP_002512481.1| syntaxin, putative [Ricinus communis] gi|223548442|gb|EEF49933.1| syntaxin, putative [Ricinus communis] Length = 323 Score = 79.0 bits (193), Expect(2) = 7e-22 Identities = 38/46 (82%), Positives = 44/46 (95%) Frame = +1 Query: 25 SLATDLQNLSVDLRKKQSTYLKHLRQQKEGEDGVDLEMNLNENRSQ 162 SLATDLQNLS++LRKKQSTYLK LRQQKEG+DGVDLEMNLN ++S+ Sbjct: 159 SLATDLQNLSMELRKKQSTYLKRLRQQKEGQDGVDLEMNLNGSKSR 204 Score = 50.8 bits (120), Expect(2) = 7e-22 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 49/99 (49%) Frame = +2 Query: 164 LEVDDFSDLGFNEHQVSELKKSKAFTVEREKEINQ------------------------- 268 ++ DD D+ F+EHQ+++LKKS+AFTVERE+EI Q Sbjct: 205 IDDDDLDDMVFSEHQMAKLKKSEAFTVEREREIQQVVESVNELAQIMKDLSVLVIDQGTI 264 Query: 269 ------------------------AERTQRKGGMVCCAT 313 AERTQ++GGMV CAT Sbjct: 265 VDRIDYNIQNVATTVEEGLKQLQKAERTQKQGGMVMCAT 303