BLASTX nr result

ID: Coptis23_contig00012596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012596
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276587.1| PREDICTED: uncharacterized protein LOC100244...   172   2e-40
emb|CAN80259.1| hypothetical protein VITISV_034223 [Vitis vinifera]   169   1e-39
ref|XP_004149202.1| PREDICTED: uncharacterized protein LOC101204...   157   4e-36
ref|XP_003535687.1| PREDICTED: uncharacterized protein LOC100802...   155   2e-35
ref|XP_002308475.1| predicted protein [Populus trichocarpa] gi|2...   154   4e-35

>ref|XP_002276587.1| PREDICTED: uncharacterized protein LOC100244210 [Vitis vinifera]
          Length = 320

 Score =  172 bits (436), Expect = 2e-40
 Identities = 114/281 (40%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
 Frame = +1

Query: 106 QDGVKTLVRGGSGGASDAKVACETLLNVDPPP----------GFPAESFYVSKEDEYDWY 255
           Q  ++TLV    GG  D K+ACETL + D  P           FP ESF++SK+ E DW+
Sbjct: 3   QVDLETLVSVCGGGGCDRKIACETLADGDVAPEGTDLPEVAPDFPPESFWLSKDAELDWF 62

Query: 256 DRNSVYERNESLKGNSTQIPHFGNSNAHISHSNPNSQRFSSNLLSKASVILGLPKQHNSC 435
           DRN+ YER ES KGNST      N   H SHSN +SQRFS NL SKAS+I GLPK     
Sbjct: 63  DRNAFYERKESTKGNSTSTNLNPN---HNSHSNSSSQRFSLNLKSKASII-GLPKPQKP- 117

Query: 436 CFKDGKIRRNVKPGNARFFPKRSGSDGKRSVRVGEPSSPKVSCIGRVXXXXXXXXXXXXX 615
           C+ D K RRN +  N R F KR+   GK +V + EPSSPKVSC+GRV             
Sbjct: 118 CYTDAKTRRNCRASNTRLFLKRTEPTGKSAVPMAEPSSPKVSCMGRVRSKKDRSRRLRNR 177

Query: 616 PELFDTT------------------KPAKTGLWSSFKVVLYSCRKNHAVDV----KEASK 729
                +                   K  K G W + K +  + R      V    K++S 
Sbjct: 178 QRSIKSPAEMATVAAEAKMIRSKSGKHKKGGFWKNLKSIFRTGRAKPIKGVPEPPKQSSP 237

Query: 730 KNSKAPPVQ----GDKEANPPGLGGLNRFVSGRRSDSWAGD 840
           +NS     +     + E+ PP LGG+ RF SGRRSDSW  D
Sbjct: 238 RNSFTARAREMHTSEPESEPPTLGGVQRFASGRRSDSWIDD 278


>emb|CAN80259.1| hypothetical protein VITISV_034223 [Vitis vinifera]
          Length = 321

 Score =  169 bits (429), Expect = 1e-39
 Identities = 112/282 (39%), Positives = 142/282 (50%), Gaps = 37/282 (13%)
 Frame = +1

Query: 106 QDGVKTLVRGGSGGASDAKVACETLLNVDPPP----------GFPAESFYVSKEDEYDWY 255
           Q  ++TLV    GG  D K+ACETL + D  P           FP ESF++SK+ E DW+
Sbjct: 3   QVDLETLVSVCGGGGCDRKIACETLADGDVAPEGTXLPEVAPDFPPESFWLSKDAELDWF 62

Query: 256 DRNSVYERNESLKGNSTQIPHFGNSNAHISHSNPNSQRFSSNLLSKASVILGLPKQHNSC 435
           DRN+ YER ES KGNST      N   H SHSN +SQRFS NL SKAS+I GLPK     
Sbjct: 63  DRNAFYERKESTKGNSTSTNLNPN---HNSHSNSSSQRFSLNLKSKASII-GLPKPQKP- 117

Query: 436 CFKDGKIRRNVKPGNARFFPKRSGSDGKRSVRVGEPSSPKVSCIGRVXXXXXXXXXXXXX 615
           C+ D K RRN +  N R F KR+   GK +V + EPSSPKVSC+GRV             
Sbjct: 118 CYTDAKXRRNCRASNTRLFLKRTEPTGKSAVPMAEPSSPKVSCMGRVRSKKDRSRRLRNR 177

Query: 616 PELFDTT------------------KPAKTGLWSSFKVVLYSCRKNHAV-----DVKEAS 726
                +                   K  K G W + K +  +  +   +       K++S
Sbjct: 178 QRSIKSPAEMATXAAEAKMIRSKSGKHKKGGFWKNLKSIFRTGGRAKPIKGVPEPPKQSS 237

Query: 727 KKNSKAPPVQ----GDKEANPPGLGGLNRFVSGRRSDSWAGD 840
            +NS     +     + E+ PP LGG+ RF SGRRSDSW  D
Sbjct: 238 PRNSFTARAREMHTSEPESEPPTLGGVQRFASGRRSDSWIDD 279


>ref|XP_004149202.1| PREDICTED: uncharacterized protein LOC101204080 [Cucumis sativus]
           gi|449500898|ref|XP_004161224.1| PREDICTED:
           uncharacterized LOC101204080 [Cucumis sativus]
          Length = 287

 Score =  157 bits (398), Expect = 4e-36
 Identities = 114/286 (39%), Positives = 139/286 (48%), Gaps = 44/286 (15%)
 Frame = +1

Query: 106 QDGVKTLVRG-GSGGASDAKVACETLLNV-DP---------------PPGFPAESFYVSK 234
           Q  ++TLV     GGA D K+ACE  L+  DP               PP FP ESF++SK
Sbjct: 3   QVDLETLVSACAGGGAHDRKIACEEALDDGDPRPEEENREVTEQPEIPPDFPPESFWLSK 62

Query: 235 EDEYDWYDRNSVYERNESLKGNSTQIPHFGNSNAHISH-SNPNSQRFSSNLLSKASVILG 411
           + E+DW ++N+ YER +S KG+S       N N  ++  SN NSQRFS N  SKAS ILG
Sbjct: 63  DAEFDWLNQNAFYERKDSTKGSSNST----NLNPTVNPTSNSNSQRFSLNFKSKAS-ILG 117

Query: 412 LPKQHNSCCFKDGKIRRNVKPGNARFFPKRSGSDGKRSVRVGEPSSPKVSCIGRV----- 576
           LPK H +C F D K RRN K GN R FPK+SGS  K    + EPSSPKVSC+GRV     
Sbjct: 118 LPKLHKTC-FVDSKSRRNAKSGNTRLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRD 176

Query: 577 ---XXXXXXXXXXXXXPELFDTTKPAKTGLWSSFKVVLYSCRKNHAVDVKEASKKNSKAP 747
                           P+     K  + G   +F+  L+ C K   V    A        
Sbjct: 177 RSRRWKNRRRSCEPAPPKEKPERKDTEPGFLCTFR-NLFRCWKKTPVVKPTAPDSGDSLA 235

Query: 748 PVQGDK------------------EANPPGLGGLNRFVSGRRSDSW 831
               DK                  E  PPGLGG+ RF SGRRS SW
Sbjct: 236 MKASDKIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSW 281


>ref|XP_003535687.1| PREDICTED: uncharacterized protein LOC100802723 [Glycine max]
          Length = 304

 Score =  155 bits (392), Expect = 2e-35
 Identities = 114/303 (37%), Positives = 150/303 (49%), Gaps = 57/303 (18%)
 Frame = +1

Query: 106 QDGVKTLVRGGSGGASDAKVACETLLNVDPP----PGFPAESFYVSKEDEYDWYDRNSVY 273
           Q  ++TLV   +GG SD K+ACE   +        P  P ESF++S + EYDW+DRN+VY
Sbjct: 3   QMDLETLVSACAGGCSDQKIACEPHADEGDHGGRLPDSPPESFWLSGDAEYDWWDRNAVY 62

Query: 274 ERNESLKGNSTQIPHFGNSNAHISHSNPNSQRFSSNLLSKASVILGLPKQHNSCCFKDGK 453
           ERNES KGNS       ++N + S+SN NSQRFS NL SKA++I GLPK   +  F D K
Sbjct: 63  ERNESTKGNSI----ISSTNLN-SNSNNNSQRFSKNLKSKAAII-GLPKPQKA-TFADAK 115

Query: 454 IRRNVK-PGNARFFPKRSGS-DGKRSVRVGEPSSPKVSCIGRVXXXXXXXXXXXXXPELF 627
            RRN + PGNAR FPKRS S  GK    V EPSSPKVSCIGRV                 
Sbjct: 116 SRRNHRPPGNARLFPKRSASVGGKLEGSVVEPSSPKVSCIGRVRSKRDRNRRLRTRQRSI 175

Query: 628 DT----------------------TKPAKTGLWSSFKVVLYSCRKNHAVDVKEASKKNSK 741
            +                      ++  KTG + S + +    R+   V   +  +++S 
Sbjct: 176 SSSTATAATTGSISSAVTRQKSTRSQRKKTGFFESVRAIFRHGRRGKPVQKPDLPQEDSS 235

Query: 742 APPVQGDKE----------------------------ANPPGLGGLNRFVSGRRSDSW-A 834
           +  ++  +                             A PPGLG +NRF SGRRS+SW  
Sbjct: 236 SSKMKKKRSYGKKARGSTTSSTTNRNDASFEESFSSAAPPPGLGSVNRFASGRRSESWGV 295

Query: 835 GDA 843
           GD+
Sbjct: 296 GDS 298


>ref|XP_002308475.1| predicted protein [Populus trichocarpa] gi|222854451|gb|EEE91998.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  154 bits (389), Expect = 4e-35
 Identities = 117/301 (38%), Positives = 145/301 (48%), Gaps = 58/301 (19%)
 Frame = +1

Query: 106 QDGVKTLVRGGSGGASDAKVACETLLN------------------VDPPPGFPAESFYVS 231
           Q  ++TLV   +GG+ D KVACET+                     + PP FP ESF++S
Sbjct: 3   QVDLETLVSACAGGSCDRKVACETIAASSTTTTNHSQPPLDSSDLAEVPPDFPPESFWLS 62

Query: 232 KEDEYDWYDRNSVYERNESLKGNSTQIPHFGNSNAH-ISHSNP-NSQRFSSNLLSKASVI 405
           K+ E DW+  N+ YER +S KGNS       N N + I + NP NSQRFSS L +KAS+I
Sbjct: 63  KDAELDWFSTNAYYERKDSTKGNSNST----NLNPNIIPNPNPSNSQRFSS-LHTKASII 117

Query: 406 LGLPKQHNSCCFKDGKIRRNVKPGNARFFPKRSGSDGKR-SVRVGEPSSPKVSCIGRV-- 576
            GLPK   S    D K RRN KPGN R FPKRSGS GK  S  + EPSSPKVSC+GRV  
Sbjct: 118 -GLPKTQKSTFVVDKKNRRNCKPGNTRLFPKRSGSTGKSDSTTMVEPSSPKVSCMGRVRS 176

Query: 577 ----------XXXXXXXXXXXXXPELFDTTKPAKTGLWSSFKVVLYSCRKNHAVDVKE-- 720
                                   E     K  K   ++SFK +  S   N  + +K   
Sbjct: 177 KKDRNRRLRKQQQEQRSFQSIGKKESTKRDKKEKKSFFASFKAIFRSKSNNKDISLKSGN 236

Query: 721 ------------ASKKNS-----------KAPPVQGDKEANPPGLGGLNRFVSGRRSDSW 831
                       A KK+S            APP +        GLGG+ RF SGRRS+SW
Sbjct: 237 VTSHGGSVSESYALKKSSDIRDRLPASDRDAPPRRSVGMEPVVGLGGMTRFASGRRSESW 296

Query: 832 A 834
           +
Sbjct: 297 S 297


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