BLASTX nr result

ID: Coptis23_contig00012582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012582
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266696.1| PREDICTED: uncharacterized protein LOC100244...   200   5e-49
ref|XP_002327066.1| predicted protein [Populus trichocarpa] gi|2...   176   6e-42
ref|XP_004154141.1| PREDICTED: uncharacterized protein LOC101206...   164   3e-38
gb|ADN34100.1| hypothetical protein [Cucumis melo subsp. melo]        164   4e-38
ref|XP_002301221.1| predicted protein [Populus trichocarpa] gi|2...   157   3e-36

>ref|XP_002266696.1| PREDICTED: uncharacterized protein LOC100244411 [Vitis vinifera]
          Length = 303

 Score =  200 bits (508), Expect = 5e-49
 Identities = 136/306 (44%), Positives = 166/306 (54%), Gaps = 30/306 (9%)
 Frame = -1

Query: 920 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGHIHHHNPPPLV 741
           MRC +H +DLSS VGVCA+CLRERLF+LIAAQ                      +PPPLV
Sbjct: 1   MRCKKHPTDLSSGVGVCASCLRERLFSLIAAQAEAQARAQAQGRLAEDRRKSDTHPPPLV 60

Query: 740 FPRSVSPYICRR-SDDSSWHNQVHD----RRFYSTPQVGPTFSK-----NYDSGKRRGRK 591
           FPRSVSPY+CRR SDD +  +Q++D    RRFYSTPQVGPT+S      ++D  K++  K
Sbjct: 61  FPRSVSPYVCRRKSDDVACGHQLYDTVSQRRFYSTPQVGPTYSNTGTVASFDLFKKKPSK 120

Query: 590 -XXXXXXXXXXXXSEQSD--------HTQQXXXXXXXXXSGRRKKNSRFDQRANVFPR-- 444
                        + +SD         +           SG  KK SR     N   R  
Sbjct: 121 FAFVKSLFRSRSETSESDPRVSRGTTTSSSSSSWLGSIFSGWSKKQSRLCDETNAGGRRV 180

Query: 443 CRRDRGMSPTNVEDQRDFETEDIETESGYSSVATA--------TPARRKGSVLHNRNVSG 288
           CR +RGMSP   ED+ D + +   + SGYSS + A         PA R+      RNVSG
Sbjct: 181 CRMNRGMSPARREDEED-DYDLSPSASGYSSESQAWRRTPTATAPATRRARPTLGRNVSG 239

Query: 287 LAFCMSPLVRASPNNHRKDVNLPTS-GFSGEISRKNVSGKCHLSAAASLCANRSRKLADF 111
           LAFCMSPLVRASPN       +P   G  GEI    V  K +LS AA+ CANRSRKLADF
Sbjct: 240 LAFCMSPLVRASPNRQWNQKGMPPEIGLPGEI---RVQTKPNLSTAAAFCANRSRKLADF 296

Query: 110 GRYNYN 93
           GR+N+N
Sbjct: 297 GRFNHN 302


>ref|XP_002327066.1| predicted protein [Populus trichocarpa] gi|222835381|gb|EEE73816.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  176 bits (447), Expect = 6e-42
 Identities = 128/316 (40%), Positives = 155/316 (49%), Gaps = 40/316 (12%)
 Frame = -1

Query: 920 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGHIHHHN----- 756
           MRCN+H  DLS SVGVCA+CLRER                         +  HH      
Sbjct: 1   MRCNKHPCDLSCSVGVCASCLRERF-------------------RKSDSNSQHHQQQQQQ 41

Query: 755 --PPPLVFPRSVSPYICRRSDD--SSW--HNQVHDRRFYSTPQVGPTFSKNYDSG-KRRG 597
             PPPL+FP SVSPY+ RR  D  SSW  HNQ H+ RFYSTPQVGPT++    +  K+R 
Sbjct: 42  QQPPPLIFPLSVSPYVSRRKSDDHSSWYAHNQHHNLRFYSTPQVGPTYTTTTTAAYKKRN 101

Query: 596 RKXXXXXXXXXXXXSEQSDHT-----------QQXXXXXXXXXSGRRKKNSR-----FDQ 465
           +K             + S H+                      SGRR+K S      +  
Sbjct: 102 KKFSLFSSLFRSRSDKFSTHSTSYRDSIEASSSSSPSWLSTIFSGRRRKQSTQLSMGYSG 161

Query: 464 RANVFPRCRRDRGMSPTNVE-DQRDFETEDI---------ETESGYSSVATATPARRKGS 315
             +  PR R DRGMSP      + D E  D          E+  G+     +  + R+G 
Sbjct: 162 SVSGKPRQRLDRGMSPARGSVSEEDCENCDRSPSGSGFSPESSPGWKKTPVSQASMRRGK 221

Query: 314 VLHNRNVSGLAFCMSPLVRASPNNH--RKDVNLPTSGFSGEISRKNVSGKCHLSAAASLC 141
             H RNVSGL FC+SPLVRASPN +  +K    P  G SGE +R  V  K HLS AAS C
Sbjct: 222 AGHTRNVSGLTFCLSPLVRASPNRNWSQKGGLPPELGLSGE-TRAPV--KPHLSTAASFC 278

Query: 140 ANRSRKLADFGRYNYN 93
           ANRSRKLADFGR N+N
Sbjct: 279 ANRSRKLADFGRVNHN 294


>ref|XP_004154141.1| PREDICTED: uncharacterized protein LOC101206256 [Cucumis sativus]
            gi|449499030|ref|XP_004160701.1| PREDICTED:
            uncharacterized protein LOC101229830 [Cucumis sativus]
          Length = 335

 Score =  164 bits (415), Expect = 3e-38
 Identities = 131/338 (38%), Positives = 160/338 (47%), Gaps = 62/338 (18%)
 Frame = -1

Query: 920  MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGHIHHH------ 759
            MRC +H+SD++S+VGVCATCLRERL +L+AAQ                            
Sbjct: 1    MRCKKHLSDVTSAVGVCATCLRERLLSLMAAQARAEAHQLQLSRLRSSTAAAEDLPRKSD 60

Query: 758  --NPPPLVFPRSVSPYICRRS-DDSSW---------HNQVHDRRFYSTPQVGPTFSKN-- 621
               PPPLVFPRSVSPY+ RR  +DSSW         H + H  RFYSTPQVGPT+     
Sbjct: 61   PLPPPPLVFPRSVSPYVSRRKVEDSSWSFQSPLDDRHRRFH-HRFYSTPQVGPTYYAGGI 119

Query: 620  -------YDSGKRRGRKXXXXXXXXXXXXSEQSDHT-------------QQXXXXXXXXX 501
                     S  R+ R             SE+ D                          
Sbjct: 120  STSSFVTTGSVSRKQRSRFSFFSSLFRSRSEKLDSVPHDFSHSTCEPVPSSSSTWFSSMF 179

Query: 500  SGRRKKNSRF-------DQRANVFPRCRRDRGMSPTNVEDQRDFETEDIE----TESGYS 354
            S R+KK S+F       DQR    P     RGMSP     + D + +D      + SGYS
Sbjct: 180  SRRKKKQSKFCSIEEQMDQRKKPPPSRFFSRGMSPAGGASEADGDCDDRRDGSPSASGYS 239

Query: 353  SVATA---TPARRKGSVLH------NRNVSGLAFCMSPLVRASPNN-HRKDVNLPTSG-F 207
            S ++    +PA   GS         +RNVS LAFC+SPLVRASPN+ H     LP    +
Sbjct: 240  SESSKWKPSPAASHGSTARRGRQGLSRNVSSLAFCLSPLVRASPNHRHWNQKGLPPEFVY 299

Query: 206  SGEISRKNVSGKCHLSAAASLCANRSRKLADFGRYNYN 93
            SG++    V  K H+S AAS CANRSRKLADFGR N N
Sbjct: 300  SGDV---RVPNKPHISEAASFCANRSRKLADFGRVNAN 334


>gb|ADN34100.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 337

 Score =  164 bits (414), Expect = 4e-38
 Identities = 131/340 (38%), Positives = 163/340 (47%), Gaps = 64/340 (18%)
 Frame = -1

Query: 920  MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGHIHHHN----- 756
            MRC +H+SD++S+VGVCATCLRERL +L+AAQ                            
Sbjct: 1    MRCKKHLSDVTSAVGVCATCLRERLLSLMAAQARAEAQQLQLSRLRSSTAAAGSEDLPRK 60

Query: 755  -----PPPLVFPRSVSPYICRRS-DDSSW---------HNQVHDRRFYSTPQVGPTF--- 630
                 PPPLVFPRSVSPY+ RR  +DSSW         H + H  RFYSTPQVGPT+   
Sbjct: 61   SDPLPPPPLVFPRSVSPYVSRRKVEDSSWSFQSPLDDRHRRFH-HRFYSTPQVGPTYYGG 119

Query: 629  ---SKNY---DSGKRRGRKXXXXXXXXXXXXSEQSDHTQQXXXXXXXXXSG--------- 495
               S ++    S  R+ R             SE+ D   +                    
Sbjct: 120  GISSSSFVTTGSVSRKQRSRFSFFSSLFRSRSEKLDSLPRDSSHSTCEPVSSSSSTWFSS 179

Query: 494  ----RRKKNSRF-------DQRANVFPRCRRDRGMSPTNVEDQRDFETEDIE----TESG 360
                R+KK S+F       DQR    P     RGMSP     + D + +D      + SG
Sbjct: 180  MFSRRKKKQSKFCSIEEQMDQRKKPPPSRFFSRGMSPAGGASEADGDFDDRRDGSPSASG 239

Query: 359  YSSVATA---TPARRKGSVLH------NRNVSGLAFCMSPLVRASPNN-HRKDVNLPTSG 210
            YSS ++    +PA   GS         +RNVS LAFC+SPLVRASPN+ H     LP   
Sbjct: 240  YSSESSKWKPSPAASHGSTARRGRQGLSRNVSSLAFCLSPLVRASPNHRHWNQKGLPPEF 299

Query: 209  -FSGEISRKNVSGKCHLSAAASLCANRSRKLADFGRYNYN 93
             ++G++    V  K HLS AAS CANRSRKLADFGR N N
Sbjct: 300  VYTGDV---RVPNKPHLSEAASFCANRSRKLADFGRVNAN 336


>ref|XP_002301221.1| predicted protein [Populus trichocarpa] gi|222842947|gb|EEE80494.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  157 bits (398), Expect = 3e-36
 Identities = 118/313 (37%), Positives = 149/313 (47%), Gaps = 37/313 (11%)
 Frame = -1

Query: 920 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGHIHHHNPPPLV 741
           MRC +H  DLSS VGVCA+    +                               PPPL+
Sbjct: 1   MRCKKHPGDLSSGVGVCASYESRK--------------------SDSNSQYLQQPPPPLI 40

Query: 740 FPRSVSPYICRRSDD--SSW--HNQVHDRRFYSTPQVGPTFSKNYDSG-----KRRGRKX 588
           FPRSVSPY+ RR  D  SSW  HN  H+ RFYSTPQ+GP ++    +      K++ +K 
Sbjct: 41  FPRSVSPYVARRKSDDSSSWSNHNHHHNLRFYSTPQLGPAYTTPSSTTTTAAYKKQSQKF 100

Query: 587 XXXXXXXXXXXSE-QSDHT----------QQXXXXXXXXXSGRRKKNSR-----FDQRAN 456
                       + ++D T                     SGRR+K SR     +    +
Sbjct: 101 SLFSNLFRSRSDKFKTDSTGRRDSIEPPSSSSPSWFSMVFSGRRRKQSRQLPMEYSGTVS 160

Query: 455 VFPRCRRDRGMSPTNVEDQ-RDFETED---------IETESGYSSVATATPARRKGSVLH 306
             PR R DRGMSP    D  +D E  D          E+  G+     A+   R+G   H
Sbjct: 161 GEPRQRLDRGMSPARGADSDKDCENCDRSPSGSGCSSESSPGWKKTPVASGVMRRGKAGH 220

Query: 305 NRNVSGLAFCMSPLVRAS--PNNHRKDVNLPTSGFSGEISRKNVSGKCHLSAAASLCANR 132
            RNVSGLAFC+SPLVRAS  PN ++K    P  G+SGE+       + HLS AAS CANR
Sbjct: 221 PRNVSGLAFCLSPLVRASPKPNWNQKGGLPPELGYSGEV---RAPVRPHLSTAASFCANR 277

Query: 131 SRKLADFGRYNYN 93
           SRKLADFGR N+N
Sbjct: 278 SRKLADFGRVNHN 290


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