BLASTX nr result
ID: Coptis23_contig00012560
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012560
(427 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271265.2| PREDICTED: ABC transporter B family member 9... 248 5e-64
ref|NP_193539.6| P-glycoprotein 9 [Arabidopsis thaliana] gi|3784... 248 5e-64
emb|CAB53646.1| multidrug resistance protein/P-glycoprotein-like... 248 5e-64
emb|CAB78807.1| multidrug resistance protein/P-glycoprotein-like... 248 5e-64
gb|ABG56413.1| MDR-like ABC transporter [Catharanthus roseus] 247 6e-64
>ref|XP_002271265.2| PREDICTED: ABC transporter B family member 9-like [Vitis vinifera]
Length = 1263
Score = 248 bits (632), Expect = 5e-64
Identities = 126/142 (88%), Positives = 135/142 (95%)
Frame = +2
Query: 2 VALVGESGSGKSTVISLLERFYDPDSGRITLDGVEIQKLKLNWLRQQMGLVSQEPILFNE 181
VALVGESGSGKSTVISLLERFY+PDSG I LDG+EIQK KL+WLRQQMGLV+QEP LFNE
Sbjct: 1050 VALVGESGSGKSTVISLLERFYNPDSGHILLDGMEIQKFKLSWLRQQMGLVNQEPALFNE 1109
Query: 182 TIRTNISYGKQGGASEEEIIAATKAANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAI 361
TIR NI+YGKQG A+EEEIIAAT+AANAHNFIS LPQGYDTSVGERG+QLSGGQKQRIAI
Sbjct: 1110 TIRANIAYGKQGEAAEEEIIAATRAANAHNFISALPQGYDTSVGERGLQLSGGQKQRIAI 1169
Query: 362 ARAILKDPKILLLDEATSALDA 427
ARAILKDP+ILLLDEATSALDA
Sbjct: 1170 ARAILKDPRILLLDEATSALDA 1191
Score = 192 bits (487), Expect = 3e-47
Identities = 99/141 (70%), Positives = 117/141 (82%)
Frame = +2
Query: 5 ALVGESGSGKSTVISLLERFYDPDSGRITLDGVEIQKLKLNWLRQQMGLVSQEPILFNET 184
ALVG+SGSGKSTVISLLERFYDP++G + +DGV ++K+ L W+R ++GLVSQEPILF T
Sbjct: 389 ALVGQSGSGKSTVISLLERFYDPEAGEVLIDGVNLKKINLRWIRGKIGLVSQEPILFAAT 448
Query: 185 IRTNISYGKQGGASEEEIIAATKAANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIA 364
I+ NISYGK+ A++EEI A K ANA FI +P G DT VGE G QLSGGQKQRIAIA
Sbjct: 449 IKENISYGKE-KATDEEIRTAIKLANAAKFIDKMPTGLDTMVGEHGTQLSGGQKQRIAIA 507
Query: 365 RAILKDPKILLLDEATSALDA 427
RAILK+P+ILLLDEATSALDA
Sbjct: 508 RAILKNPRILLLDEATSALDA 528
>ref|NP_193539.6| P-glycoprotein 9 [Arabidopsis thaliana]
gi|378405145|sp|Q9M0M2.2|AB9B_ARATH RecName: Full=ABC
transporter B family member 9; Short=ABC transporter
ABCB.9; Short=AtABCB9; AltName: Full=Multidrug resistance
protein 9; AltName: Full=P-glycoprotein 9
gi|332658588|gb|AEE83988.1| P-glycoprotein 9 [Arabidopsis
thaliana]
Length = 1236
Score = 248 bits (632), Expect = 5e-64
Identities = 126/142 (88%), Positives = 135/142 (95%)
Frame = +2
Query: 2 VALVGESGSGKSTVISLLERFYDPDSGRITLDGVEIQKLKLNWLRQQMGLVSQEPILFNE 181
VALVGESGSGKSTVIS++ERFY+PDSG+I +D VEIQ KL+WLRQQMGLVSQEPILFNE
Sbjct: 1024 VALVGESGSGKSTVISMIERFYNPDSGKILIDQVEIQTFKLSWLRQQMGLVSQEPILFNE 1083
Query: 182 TIRTNISYGKQGGASEEEIIAATKAANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAI 361
TIR+NI+YGK GGA+EEEIIAA KAANAHNFIS LPQGYDTSVGERGVQLSGGQKQRIAI
Sbjct: 1084 TIRSNIAYGKTGGATEEEIIAAAKAANAHNFISSLPQGYDTSVGERGVQLSGGQKQRIAI 1143
Query: 362 ARAILKDPKILLLDEATSALDA 427
ARAILKDPKILLLDEATSALDA
Sbjct: 1144 ARAILKDPKILLLDEATSALDA 1165
Score = 193 bits (490), Expect = 1e-47
Identities = 96/142 (67%), Positives = 121/142 (85%)
Frame = +2
Query: 2 VALVGESGSGKSTVISLLERFYDPDSGRITLDGVEIQKLKLNWLRQQMGLVSQEPILFNE 181
VALVG+SGSGKSTVISL+ERFYDP+SG++ +D ++++KL+L W+R ++GLVSQEP+LF
Sbjct: 386 VALVGQSGSGKSTVISLIERFYDPESGQVLIDNIDLKKLQLKWIRSKIGLVSQEPVLFAT 445
Query: 182 TIRTNISYGKQGGASEEEIIAATKAANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAI 361
TI+ NI+YGK+ A+++EI A + ANA FI LPQG DT VGE G Q+SGGQKQR+AI
Sbjct: 446 TIKENIAYGKE-DATDQEIRTAIELANAAKFIDKLPQGLDTMVGEHGTQMSGGQKQRLAI 504
Query: 362 ARAILKDPKILLLDEATSALDA 427
ARAILK+PKILLLDEATSALDA
Sbjct: 505 ARAILKNPKILLLDEATSALDA 526
>emb|CAB53646.1| multidrug resistance protein/P-glycoprotein-like [Arabidopsis
thaliana]
Length = 1222
Score = 248 bits (632), Expect = 5e-64
Identities = 126/142 (88%), Positives = 135/142 (95%)
Frame = +2
Query: 2 VALVGESGSGKSTVISLLERFYDPDSGRITLDGVEIQKLKLNWLRQQMGLVSQEPILFNE 181
VALVGESGSGKSTVIS++ERFY+PDSG+I +D VEIQ KL+WLRQQMGLVSQEPILFNE
Sbjct: 1066 VALVGESGSGKSTVISMIERFYNPDSGKILIDQVEIQTFKLSWLRQQMGLVSQEPILFNE 1125
Query: 182 TIRTNISYGKQGGASEEEIIAATKAANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAI 361
TIR+NI+YGK GGA+EEEIIAA KAANAHNFIS LPQGYDTSVGERGVQLSGGQKQRIAI
Sbjct: 1126 TIRSNIAYGKTGGATEEEIIAAAKAANAHNFISSLPQGYDTSVGERGVQLSGGQKQRIAI 1185
Query: 362 ARAILKDPKILLLDEATSALDA 427
ARAILKDPKILLLDEATSALDA
Sbjct: 1186 ARAILKDPKILLLDEATSALDA 1207
Score = 193 bits (490), Expect = 1e-47
Identities = 96/142 (67%), Positives = 121/142 (85%)
Frame = +2
Query: 2 VALVGESGSGKSTVISLLERFYDPDSGRITLDGVEIQKLKLNWLRQQMGLVSQEPILFNE 181
VALVG+SGSGKSTVISL+ERFYDP+SG++ +D ++++KL+L W+R ++GLVSQEP+LF
Sbjct: 386 VALVGQSGSGKSTVISLIERFYDPESGQVLIDNIDLKKLQLKWIRSKIGLVSQEPVLFAT 445
Query: 182 TIRTNISYGKQGGASEEEIIAATKAANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAI 361
TI+ NI+YGK+ A+++EI A + ANA FI LPQG DT VGE G Q+SGGQKQR+AI
Sbjct: 446 TIKENIAYGKE-DATDQEIRTAIELANAAKFIDKLPQGLDTMVGEHGTQMSGGQKQRLAI 504
Query: 362 ARAILKDPKILLLDEATSALDA 427
ARAILK+PKILLLDEATSALDA
Sbjct: 505 ARAILKNPKILLLDEATSALDA 526
>emb|CAB78807.1| multidrug resistance protein/P-glycoprotein-like [Arabidopsis
thaliana]
Length = 1323
Score = 248 bits (632), Expect = 5e-64
Identities = 126/142 (88%), Positives = 135/142 (95%)
Frame = +2
Query: 2 VALVGESGSGKSTVISLLERFYDPDSGRITLDGVEIQKLKLNWLRQQMGLVSQEPILFNE 181
VALVGESGSGKSTVIS++ERFY+PDSG+I +D VEIQ KL+WLRQQMGLVSQEPILFNE
Sbjct: 1066 VALVGESGSGKSTVISMIERFYNPDSGKILIDQVEIQTFKLSWLRQQMGLVSQEPILFNE 1125
Query: 182 TIRTNISYGKQGGASEEEIIAATKAANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAI 361
TIR+NI+YGK GGA+EEEIIAA KAANAHNFIS LPQGYDTSVGERGVQLSGGQKQRIAI
Sbjct: 1126 TIRSNIAYGKTGGATEEEIIAAAKAANAHNFISSLPQGYDTSVGERGVQLSGGQKQRIAI 1185
Query: 362 ARAILKDPKILLLDEATSALDA 427
ARAILKDPKILLLDEATSALDA
Sbjct: 1186 ARAILKDPKILLLDEATSALDA 1207
Score = 193 bits (490), Expect = 1e-47
Identities = 96/142 (67%), Positives = 121/142 (85%)
Frame = +2
Query: 2 VALVGESGSGKSTVISLLERFYDPDSGRITLDGVEIQKLKLNWLRQQMGLVSQEPILFNE 181
VALVG+SGSGKSTVISL+ERFYDP+SG++ +D ++++KL+L W+R ++GLVSQEP+LF
Sbjct: 386 VALVGQSGSGKSTVISLIERFYDPESGQVLIDNIDLKKLQLKWIRSKIGLVSQEPVLFAT 445
Query: 182 TIRTNISYGKQGGASEEEIIAATKAANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAI 361
TI+ NI+YGK+ A+++EI A + ANA FI LPQG DT VGE G Q+SGGQKQR+AI
Sbjct: 446 TIKENIAYGKE-DATDQEIRTAIELANAAKFIDKLPQGLDTMVGEHGTQMSGGQKQRLAI 504
Query: 362 ARAILKDPKILLLDEATSALDA 427
ARAILK+PKILLLDEATSALDA
Sbjct: 505 ARAILKNPKILLLDEATSALDA 526
>gb|ABG56413.1| MDR-like ABC transporter [Catharanthus roseus]
Length = 1266
Score = 247 bits (631), Expect = 6e-64
Identities = 124/142 (87%), Positives = 136/142 (95%)
Frame = +2
Query: 2 VALVGESGSGKSTVISLLERFYDPDSGRITLDGVEIQKLKLNWLRQQMGLVSQEPILFNE 181
VALVGESGSGKSTVISL+ERFYDPDSG I LDGVE+QKLK++WLRQQMGLVSQEP+LFNE
Sbjct: 1054 VALVGESGSGKSTVISLIERFYDPDSGNIYLDGVELQKLKISWLRQQMGLVSQEPVLFNE 1113
Query: 182 TIRTNISYGKQGGASEEEIIAATKAANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAI 361
+IR NI+YGKQG A+E+EIIAATKA+NAH+FIS LP GYDTSVGERGVQLSGGQKQRIAI
Sbjct: 1114 SIRDNIAYGKQGNATEDEIIAATKASNAHSFISSLPNGYDTSVGERGVQLSGGQKQRIAI 1173
Query: 362 ARAILKDPKILLLDEATSALDA 427
ARAILKDP+ILLLDEATSALDA
Sbjct: 1174 ARAILKDPRILLLDEATSALDA 1195
Score = 194 bits (493), Expect = 6e-48
Identities = 100/141 (70%), Positives = 117/141 (82%)
Frame = +2
Query: 5 ALVGESGSGKSTVISLLERFYDPDSGRITLDGVEIQKLKLNWLRQQMGLVSQEPILFNET 184
ALVG+SGSGKSTVISLLERFYDP++G + +DGV ++K++L WLR+Q+GLVSQEPILF T
Sbjct: 394 ALVGQSGSGKSTVISLLERFYDPEAGEVLIDGVNLKKMRLRWLREQLGLVSQEPILFATT 453
Query: 185 IRTNISYGKQGGASEEEIIAATKAANAHNFISGLPQGYDTSVGERGVQLSGGQKQRIAIA 364
I+ NI YGK A++ EI A + ANA FI LPQG DT VGE G QLSGGQKQRIAIA
Sbjct: 454 IKENILYGK-SNATDSEIRTAIQLANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIA 512
Query: 365 RAILKDPKILLLDEATSALDA 427
RAILK+P+ILLLDEATSALDA
Sbjct: 513 RAILKNPRILLLDEATSALDA 533