BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012556
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]    94   1e-17
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...    93   2e-17
emb|CBI33123.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|...    82   6e-14
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...    80   1e-13

>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
          Length = 435

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/75 (66%), Positives = 57/75 (76%)
 Frame = +2

Query: 8   KKAKTENDSKSSTKDGSASAPRGGTVAQKGSASSIKTESESPVGPVTEDEIRAVLLQKSP 187
           KK KTEN+SKSS KD   S  +    A+   +SS+KT S S  GPVTEDEIRAVLLQK+P
Sbjct: 329 KKVKTENESKSSAKDEGPSPSKVTATAKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAP 388

Query: 188 VTTQDLVAKFKSRLK 232
           VTTQDLVAKFK+RLK
Sbjct: 389 VTTQDLVAKFKARLK 403


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Vitis vinifera]
          Length = 534

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/76 (69%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
 Frame = +2

Query: 8   KKAKTENDSKSSTKDGSASAPRGGTVAQKGS-ASSIKTESESPVGPVTEDEIRAVLLQKS 184
           KK KTEN+SKSS KD   S P   T   KG+ +SS+KT S S  GPVTEDEIRAVLLQK+
Sbjct: 428 KKVKTENESKSSAKDEGPS-PSKVTATPKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKA 486

Query: 185 PVTTQDLVAKFKSRLK 232
           PVTTQDLVAKFK+RLK
Sbjct: 487 PVTTQDLVAKFKARLK 502


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/76 (69%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
 Frame = +2

Query: 8   KKAKTENDSKSSTKDGSASAPRGGTVAQKGS-ASSIKTESESPVGPVTEDEIRAVLLQKS 184
           KK KTEN+SKSS KD   S P   T   KG+ +SS+KT S S  GPVTEDEIRAVLLQK+
Sbjct: 433 KKVKTENESKSSAKDEGPS-PSKVTATPKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKA 491

Query: 185 PVTTQDLVAKFKSRLK 232
           PVTTQDLVAKFK+RLK
Sbjct: 492 PVTTQDLVAKFKARLK 507


>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis]
           gi|223530933|gb|EEF32792.1| tfiif-alpha, putative
           [Ricinus communis]
          Length = 584

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/76 (57%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 8   KKAKTENDSKSSTKDGSASAPRGGTVAQ-KGSASSIKTESESPVGPVTEDEIRAVLLQKS 184
           KK KTEN+SK   K+ +    +  + A  KG+A+S++TES S  G VT++EI+AVLLQ  
Sbjct: 477 KKVKTENESKHIVKEENVPTSKSKSSANPKGAAASLRTESTSSTGFVTDEEIKAVLLQNG 536

Query: 185 PVTTQDLVAKFKSRLK 232
           PVTTQDLVAKFKSRLK
Sbjct: 537 PVTTQDLVAKFKSRLK 552


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Cucumis sativus] gi|449517383|ref|XP_004165725.1|
           PREDICTED: transcription initiation factor IIF subunit
           alpha-like [Cucumis sativus]
          Length = 538

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/75 (56%), Positives = 55/75 (73%)
 Frame = +2

Query: 8   KKAKTENDSKSSTKDGSASAPRGGTVAQKGSASSIKTESESPVGPVTEDEIRAVLLQKSP 187
           KK KTE +SK++ +      P   + A KG+ +S+KTE  S  GPVTE+EIRAVL Q++P
Sbjct: 433 KKMKTETESKATDE----GVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTP 488

Query: 188 VTTQDLVAKFKSRLK 232
           VTTQDLVAKFK+RL+
Sbjct: 489 VTTQDLVAKFKARLR 503