BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012544
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...   375   e-102
emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]   369   e-100
ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...   345   6e-93
ref|NP_199422.1| pentatricopeptide repeat-containing protein [Ar...   331   9e-89
ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containi...   330   2e-88

>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
           protein product [Vitis vinifera]
          Length = 503

 Score =  375 bits (963), Expect = e-102
 Identities = 175/249 (70%), Positives = 214/249 (85%)
 Frame = -3

Query: 751 EPTEKLYVSVFAILVNESQLKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSAL 572
           EP++K Y++VFAILV E+QLK+A +F++YM+EMG+P S   +N+LIKA C N GTMD+AL
Sbjct: 117 EPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAAL 176

Query: 571 RVFREMPDHGCLPDSYTYGTLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGF 392
           R+FREMP+ GC PDSYTYGTLI+G+C+ GKI EAK+LF+EMETK CSPTVVTYTSLIHG 
Sbjct: 177 RIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGL 236

Query: 391 CISKKLDEAMKLFGEMSSKGIEPNVVTFSSLMDGLCKVGRSSEAIGLLEKMISKRHLPNV 212
           C SK LD A++L  EM+SKGI+PNV T+SSLMDG CK G SS A+ LL+ M+S+RHLPN+
Sbjct: 237 CQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNM 296

Query: 211 ITYSTLVHGLCKEGNLQGVVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDE 32
           ITYSTLVHGLCKEG LQ  VE+LDRMKLQ L+PDAGLYGK+++G C++ KF +AANFLDE
Sbjct: 297 ITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDE 356

Query: 31  MVLGGISPN 5
           MVLGGISPN
Sbjct: 357 MVLGGISPN 365


>emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  369 bits (948), Expect = e-100
 Identities = 173/249 (69%), Positives = 211/249 (84%)
 Frame = -3

Query: 751 EPTEKLYVSVFAILVNESQLKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSAL 572
           EP++K Y++VFAILV E+QLK+A +F++YM+EMG+P S   +N+LIKA C N GTMD+AL
Sbjct: 117 EPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAAL 176

Query: 571 RVFREMPDHGCLPDSYTYGTLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGF 392
           R+FREMP+ GC P SYTYGTLI G+C+ GKI EAK+LF+EMETK CSPTVVTY SLIHG 
Sbjct: 177 RIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGL 236

Query: 391 CISKKLDEAMKLFGEMSSKGIEPNVVTFSSLMDGLCKVGRSSEAIGLLEKMISKRHLPNV 212
           C SK LD A++L  EM+SKGI+PNV T+SSLMDG CK G SS A+ LL+ M+S+RHLPN+
Sbjct: 237 CQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNM 296

Query: 211 ITYSTLVHGLCKEGNLQGVVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDE 32
           ITYSTLVHGLCKEG LQ  VE+LDRMKLQ L+PDAGLYGK+++G C++ KF +AANFLDE
Sbjct: 297 ITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDE 356

Query: 31  MVLGGISPN 5
           MVLGGISPN
Sbjct: 357 MVLGGISPN 365


>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  345 bits (885), Expect = 6e-93
 Identities = 164/249 (65%), Positives = 200/249 (80%)
 Frame = -3

Query: 751 EPTEKLYVSVFAILVNESQLKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSAL 572
           +PT+K Y+SVFAILV E+QLK+A  F+KYM+EMGV +S   +N+LIKA C N GT+D+A 
Sbjct: 117 KPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAF 176

Query: 571 RVFREMPDHGCLPDSYTYGTLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGF 392
            +FREMP  GC PDSYTYGTLI+G+CK GK  EAK+LF+EM+TKGCSP+VVTY+ L+HG 
Sbjct: 177 EIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGL 236

Query: 391 CISKKLDEAMKLFGEMSSKGIEPNVVTFSSLMDGLCKVGRSSEAIGLLEKMISKRHLPNV 212
           C +  +DEAM LF +M  K IEPNV T+SSLMDGLCK G S EA+ LLE M+ KRH PN+
Sbjct: 237 CQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNM 296

Query: 211 ITYSTLVHGLCKEGNLQGVVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDE 32
           +TYSTL++GLCKEG L   VE LDRMKLQ LKPDAGLYGK++ G C + KFQ+AA +LDE
Sbjct: 297 VTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDE 356

Query: 31  MVLGGISPN 5
           MVLG ISPN
Sbjct: 357 MVLGQISPN 365


>ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g46100 gi|9757730|dbj|BAB08255.1| salt-inducible
           protein-like [Arabidopsis thaliana]
           gi|332007954|gb|AED95337.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  331 bits (849), Expect = 9e-89
 Identities = 156/249 (62%), Positives = 202/249 (81%)
 Frame = -3

Query: 751 EPTEKLYVSVFAILVNESQLKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSAL 572
           +P++K YV+V AILV E+QL +A KF+K M+E+G+P +   +N+LIKA C N+GT+D+ L
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177

Query: 571 RVFREMPDHGCLPDSYTYGTLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGF 392
           ++F EMP  GC PDSYTYGTLISG+C+FG+I+EAK LF EM  K C+PTVVTYTSLI+G 
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237

Query: 391 CISKKLDEAMKLFGEMSSKGIEPNVVTFSSLMDGLCKVGRSSEAIGLLEKMISKRHLPNV 212
           C SK +DEAM+   EM SKGIEPNV T+SSLMDGLCK GRS +A+ L E M+++   PN+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297

Query: 211 ITYSTLVHGLCKEGNLQGVVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDE 32
           +TY+TL+ GLCKE  +Q  VE+LDRM LQ LKPDAGLYGK+++G C +SKF++AANFLDE
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357

Query: 31  MVLGGISPN 5
           M+LGGI+PN
Sbjct: 358 MILGGITPN 366



 Score =  129 bits (323), Expect = 9e-28
 Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 7/256 (2%)
 Frame = -3

Query: 751 EPTEKLYVSVFAILVNESQLKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSAL 572
           +P    Y ++ + L    ++  AKK F  M E     +      LI   C ++  +D A+
Sbjct: 189 DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN-VDEAM 247

Query: 571 RVFREMPDHGCLPDSYTYGTLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGF 392
           R   EM   G  P+ +TY +L+ G+CK G+  +A +LF+ M  +GC P +VTYT+LI G 
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307

Query: 391 CISKKLDEAMKLFGEMSSKGIEPNVVTFSSLMDGLCKVGRSSEAIGLLEKMISKRHLPNV 212
           C  +K+ EA++L   M+ +G++P+   +  ++ G C + +  EA   L++MI     PN 
Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNR 367

Query: 211 ITY-------STLVHGLCKEGNLQGVVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQD 53
           +T+       + +V GLC     +     L  M+ + +  +      LV  LC+  +FQ 
Sbjct: 368 LTWNIHVKTSNEVVRGLCANYPSRAFTLYLS-MRSRGISVEVETLESLVKCLCKKGEFQK 426

Query: 52  AANFLDEMVLGGISPN 5
           A   +DE+V  G  P+
Sbjct: 427 AVQLVDEIVTDGCIPS 442



 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 61/227 (26%), Positives = 92/227 (40%), Gaps = 41/227 (18%)
 Frame = -3

Query: 748 PTEKLYVSVFAILVNESQLKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSALR 569
           PT   Y S+   L     +  A ++ + MK  G+  +    + L+   C  +G    A+ 
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLC-KDGRSLQAME 283

Query: 568 VFREMPDHGCLPDSYTYGTLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGFC 389
           +F  M   GC P+  TY TLI+G+CK  KI EA +L   M  +G  P    Y  +I GFC
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343

Query: 388 ISKKLDEAMKLFGEMSSKGIEPN------------------------------------- 320
              K  EA     EM   GI PN                                     
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRG 403

Query: 319 ----VVTFSSLMDGLCKVGRSSEAIGLLEKMISKRHLPNVITYSTLV 191
               V T  SL+  LCK G   +A+ L++++++   +P+  T+  L+
Sbjct: 404 ISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450


>ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
           gi|449484609|ref|XP_004156929.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  330 bits (847), Expect = 2e-88
 Identities = 157/249 (63%), Positives = 195/249 (78%)
 Frame = -3

Query: 751 EPTEKLYVSVFAILVNESQLKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSAL 572
           +PTEK Y+SV AILV E+QLK A +F++ M++MG+P +   +N+LIKAFC N GTMD A+
Sbjct: 146 KPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAM 205

Query: 571 RVFREMPDHGCLPDSYTYGTLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGF 392
            +FR M +HGC PDSYTYGTLI+G+C+F  I EAK+L QEMETKGCSP+VVTYTS+IHG 
Sbjct: 206 HLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGL 265

Query: 391 CISKKLDEAMKLFGEMSSKGIEPNVVTFSSLMDGLCKVGRSSEAIGLLEKMISKRHLPNV 212
           C    +DEAM+L  +M  K IEPNV T+SSLMDG CK G SS A  +LE MI KR  PN+
Sbjct: 266 CQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNM 325

Query: 211 ITYSTLVHGLCKEGNLQGVVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDE 32
           I+YSTL++GLC EG +   +E+ DRMKLQ  KPDAGLYGK+V  LC++S+FQ+AANFLDE
Sbjct: 326 ISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDE 385

Query: 31  MVLGGISPN 5
           MVL GI PN
Sbjct: 386 MVLCGIKPN 394



 Score =  116 bits (290), Expect = 6e-24
 Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 7/255 (2%)
 Frame = -3

Query: 751 EPTEKLYVSVFAILVNESQLKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSAL 572
           EP    Y ++   L     +  AK+  + M+  G   S      +I   C     +D A+
Sbjct: 217 EPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNN-VDEAM 275

Query: 571 RVFREMPDHGCLPDSYTYGTLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGF 392
           R+  +M D    P+ +TY +L+ G CK G  + A+D+ + M  K   P +++Y++L++G 
Sbjct: 276 RLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGL 335

Query: 391 CISKKLDEAMKLFGEMSSKGIEPNVVTFSSLMDGLCKVGRSSEAIGLLEKMISKRHLPNV 212
           C   K++EA+++F  M  +G +P+   +  +++ LC V R  EA   L++M+     PN 
Sbjct: 336 CNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNR 395

Query: 211 ITYS-------TLVHGLCKEGNLQGVVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQD 53
           IT+S        ++HGLC   N     ++   +  + +      +  L+   C       
Sbjct: 396 ITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPK 455

Query: 52  AANFLDEMVLGGISP 8
            +  LDEMV+ G  P
Sbjct: 456 TSRILDEMVINGCIP 470



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 7/219 (3%)
 Frame = -3

Query: 751 EPTEKLYVSVFAILVNESQLKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSAL 572
           EP    Y S+            A+   + M +  +  +    + L+   C NEG ++ AL
Sbjct: 287 EPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLC-NEGKINEAL 345

Query: 571 RVFREMPDHGCLPDSYTYGTLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYT------ 410
            +F  M   G  PD+  YG +++ +C   +  EA +   EM   G  P  +T++      
Sbjct: 346 EIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTH 405

Query: 409 -SLIHGFCISKKLDEAMKLFGEMSSKGIEPNVVTFSSLMDGLCKVGRSSEAIGLLEKMIS 233
             +IHG C     + A +L+  + ++GI   V TF+SL+   C      +   +L++M+ 
Sbjct: 406 NRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVI 465

Query: 232 KRHLPNVITYSTLVHGLCKEGNLQGVVEVLDRMKLQDLK 116
              +P    +ST+V+  C E       +  D MKL  L+
Sbjct: 466 NGCIPQGEMWSTMVNCFCDER------KACDAMKLLQLQ 498



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
 Frame = -3

Query: 757 KFEPTEKLYVSVFAILVNESQLKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDS 578
           +  P    Y ++   L NE ++  A + F  MK  G      +   ++   C +      
Sbjct: 320 RLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLC-DVSRFQE 378

Query: 577 ALRVFREMPDHGCLPDSYTYGT-------LISGMCKFGKINEAKDLFQEMETKGCSPTVV 419
           A     EM   G  P+  T+         +I G+C     N A  L+  + T+G S TV 
Sbjct: 379 AANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVD 438

Query: 418 TYTSLIHGFCISKKLDEAMKLFGEMSSKGIEPNVVTFSSLMDGLCKVGRSSEAIGLLE 245
           T+ SL+  FC  K L +  ++  EM   G  P    +S++++  C   ++ +A+ LL+
Sbjct: 439 TFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLLQ 496