BLASTX nr result

ID: Coptis23_contig00012529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012529
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269134.1| PREDICTED: vesicle-associated membrane prote...   379   e-103
ref|XP_002515759.1| Vesicle-associated membrane protein, putativ...   368   2e-99
ref|XP_003555880.1| PREDICTED: vesicle-associated membrane prote...   367   3e-99
ref|XP_004140905.1| PREDICTED: vesicle-associated membrane prote...   366   5e-99
ref|XP_003536697.1| PREDICTED: vesicle-associated membrane prote...   365   8e-99

>ref|XP_002269134.1| PREDICTED: vesicle-associated membrane protein 727 isoform 1 [Vitis
           vinifera] gi|296086578|emb|CBI32213.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  379 bits (974), Expect = e-103
 Identities = 192/239 (80%), Positives = 201/239 (84%), Gaps = 2/239 (0%)
 Frame = -1

Query: 957 MSQKGLIYSFVARGNVVLAEHTSFSGNFSTIAVQCLQKLPSNSNKYTYSCDGHTFNFLID 778
           MSQKGLIYSFVA+G VVLAEHTSFSGNFSTIAVQCLQKLPSNS+KYTYSCDGHTFNFLID
Sbjct: 1   MSQKGLIYSFVAKGTVVLAEHTSFSGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNFLID 60

Query: 777 SGFVFLVVVDEAVGRSVPFVFLDRVKDDFKQRYGASIGSESPHPLA--XXXXXXXXXDRF 604
           SGFVFLVV DE+ GR  PFVFL+RVKDDFKQRYG SI S+ PHPLA           DRF
Sbjct: 61  SGFVFLVVADESAGRGAPFVFLERVKDDFKQRYGGSIRSDGPHPLADEDDDDDDLFEDRF 120

Query: 603 SIAYNLDREFGPKLKEHMEYCTNHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIE 424
           SIAYNLDREFGPKLKEHM+YC NHPEE+SKLSKLKAQITEVKGIMMDNIEKVLDRGERIE
Sbjct: 121 SIAYNLDREFGPKLKEHMQYCMNHPEEISKLSKLKAQITEVKGIMMDNIEKVLDRGERIE 180

Query: 423 LLVDKTENLQFQADSFQRQGRQLRRKMWLENLRMKXXXXXXXXXXXXXXXXXVCKGFKC 247
           LLVDKTENLQFQADSFQRQGRQLRRKMWL+NLR+K                  CKGFKC
Sbjct: 181 LLVDKTENLQFQADSFQRQGRQLRRKMWLQNLRLKLMVGGIVLVLIIILWLIACKGFKC 239


>ref|XP_002515759.1| Vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223545087|gb|EEF46598.1| Vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 237

 Score =  368 bits (944), Expect = 2e-99
 Identities = 187/238 (78%), Positives = 202/238 (84%), Gaps = 1/238 (0%)
 Frame = -1

Query: 957 MSQKGLIYSFVARGNVVLAEHTSFSGNFSTIAVQCLQKLPSNSNKYTYSCDGHTFNFLID 778
           MSQKGLIYSFVA+G VVLAEHT +SGNFSTIAVQCLQKLPSNS+KYTYSCDGHTFNFLID
Sbjct: 1   MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNFLID 60

Query: 777 SGFVFLVVVDEAVGRSVPFVFLDRVKDDFKQRYGASIGSESPHPLAXXXXXXXXXD-RFS 601
           SGFVFLVV DE+ GRSVPFVFL+RVKDDFKQRYGA I +E+ HPLA           RFS
Sbjct: 61  SGFVFLVVADESTGRSVPFVFLERVKDDFKQRYGAGINNEA-HPLADDDDDDDLFADRFS 119

Query: 600 IAYNLDREFGPKLKEHMEYCTNHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 421
           IAYNLDR+FGP+LKEHM+YC +HPEE+SKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL
Sbjct: 120 IAYNLDRDFGPRLKEHMQYCMSHPEEISKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 179

Query: 420 LVDKTENLQFQADSFQRQGRQLRRKMWLENLRMKXXXXXXXXXXXXXXXXXVCKGFKC 247
           LVDKTENLQFQADSFQRQGRQLRRKMWL+NL+MK                 VC+GFKC
Sbjct: 180 LVDKTENLQFQADSFQRQGRQLRRKMWLQNLQMKLMIGGAILVLIVILWLLVCRGFKC 237


>ref|XP_003555880.1| PREDICTED: vesicle-associated membrane protein 727-like [Glycine
           max]
          Length = 238

 Score =  367 bits (942), Expect = 3e-99
 Identities = 183/238 (76%), Positives = 200/238 (84%), Gaps = 1/238 (0%)
 Frame = -1

Query: 957 MSQKGLIYSFVARGNVVLAEHTSFSGNFSTIAVQCLQKLPSNSNKYTYSCDGHTFNFLID 778
           MSQ+GLIYSFVA+G VVLAEHT ++GNFSTIAVQCLQKLPSNS+KYTYSCDGHTFNFL+D
Sbjct: 1   MSQRGLIYSFVAKGTVVLAEHTQYTGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNFLLD 60

Query: 777 SGFVFLVVVDEAVGRSVPFVFLDRVKDDFKQRYGASIGSESPHPLAXXXXXXXXXD-RFS 601
           +GFVFLVV DE+ GRSVPFVFL+RVKDDF +RYGASI +E  HPLA         + RFS
Sbjct: 61  TGFVFLVVADESAGRSVPFVFLERVKDDFMKRYGASIKNEGAHPLADDDDDDDLFEDRFS 120

Query: 600 IAYNLDREFGPKLKEHMEYCTNHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 421
           IAYNLDREFGP LKEHM+YC NHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGE+IEL
Sbjct: 121 IAYNLDREFGPALKEHMQYCMNHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIEL 180

Query: 420 LVDKTENLQFQADSFQRQGRQLRRKMWLENLRMKXXXXXXXXXXXXXXXXXVCKGFKC 247
           LVDKTENLQFQADSFQRQGRQLRRKMWL+NL+MK                  C+GFKC
Sbjct: 181 LVDKTENLQFQADSFQRQGRQLRRKMWLQNLQMKLMVGGGILILIIILWVIACRGFKC 238


>ref|XP_004140905.1| PREDICTED: vesicle-associated membrane protein 727-like [Cucumis
           sativus]
          Length = 238

 Score =  366 bits (940), Expect = 5e-99
 Identities = 185/238 (77%), Positives = 202/238 (84%), Gaps = 1/238 (0%)
 Frame = -1

Query: 957 MSQKGLIYSFVARGNVVLAEHTSFSGNFSTIAVQCLQKLPSNSNKYTYSCDGHTFNFLID 778
           MSQKGLIYSFVA+G+VVLAEHTSFSGNFSTIAVQCLQ+LPSNS+K TYSCDGHTFNFL+D
Sbjct: 1   MSQKGLIYSFVAKGSVVLAEHTSFSGNFSTIAVQCLQRLPSNSSKCTYSCDGHTFNFLLD 60

Query: 777 SGFVFLVVVDEAVGRSVPFVFLDRVKDDFKQRYGASIGSESPHPLA-XXXXXXXXXDRFS 601
           SGFVFL V DE+VGR++PFVFLDRVKDDFKQRYG+SI  E+PHPLA          DRFS
Sbjct: 61  SGFVFLAVADESVGRNMPFVFLDRVKDDFKQRYGSSIKDENPHPLADDEDDDDLFLDRFS 120

Query: 600 IAYNLDREFGPKLKEHMEYCTNHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 421
           +AY LDREFGPKLKEHM+YC +HPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL
Sbjct: 121 VAYTLDREFGPKLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 180

Query: 420 LVDKTENLQFQADSFQRQGRQLRRKMWLENLRMKXXXXXXXXXXXXXXXXXVCKGFKC 247
           LVDKTENLQFQAD+F RQGRQLRRKMWL++L+MK                 VC GFKC
Sbjct: 181 LVDKTENLQFQADNFHRQGRQLRRKMWLQSLQMKLMVGGGILVLFVILWFIVCGGFKC 238


>ref|XP_003536697.1| PREDICTED: vesicle-associated membrane protein 727-like [Glycine
           max]
          Length = 238

 Score =  365 bits (938), Expect = 8e-99
 Identities = 182/238 (76%), Positives = 200/238 (84%), Gaps = 1/238 (0%)
 Frame = -1

Query: 957 MSQKGLIYSFVARGNVVLAEHTSFSGNFSTIAVQCLQKLPSNSNKYTYSCDGHTFNFLID 778
           MSQ+GLIYSFVA+G VVLAEHT ++GNFSTIAVQCLQKLPSNS+KYTYSCDGHTFNFL+D
Sbjct: 1   MSQRGLIYSFVAKGTVVLAEHTQYTGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNFLLD 60

Query: 777 SGFVFLVVVDEAVGRSVPFVFLDRVKDDFKQRYGASIGSESPHPLAXXXXXXXXXD-RFS 601
           +GFVFLVV DE++GRSVPFVFL+RVKDDF +RYGASI ++  HPLA         + RFS
Sbjct: 61  NGFVFLVVADESIGRSVPFVFLERVKDDFMKRYGASIKNDGAHPLADDEDDDDLFEDRFS 120

Query: 600 IAYNLDREFGPKLKEHMEYCTNHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 421
           IAYNLDREFGP LKEHM+YC NHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGE+IEL
Sbjct: 121 IAYNLDREFGPALKEHMQYCMNHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIEL 180

Query: 420 LVDKTENLQFQADSFQRQGRQLRRKMWLENLRMKXXXXXXXXXXXXXXXXXVCKGFKC 247
           LVDKTENLQFQADSFQRQGRQLRRKMWL+NL+MK                  C GFKC
Sbjct: 181 LVDKTENLQFQADSFQRQGRQLRRKMWLQNLQMKLMVGGGILILIIILWVIACGGFKC 238


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