BLASTX nr result

ID: Coptis23_contig00012516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012516
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634566.1| PREDICTED: protein phosphatase 1 regulatory ...    80   3e-13
gb|AFK37358.1| unknown [Lotus japonicus]                               72   7e-11
gb|ABK26998.1| unknown [Picea sitchensis]                              70   3e-10
ref|XP_002516330.1| expressed protein, putative [Ricinus communi...    69   6e-10
ref|NP_001236996.1| uncharacterized protein LOC100527761 [Glycin...    69   7e-10

>ref|XP_003634566.1| PREDICTED: protein phosphatase 1 regulatory subunit 11-like [Vitis
           vinifera]
          Length = 124

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 50/79 (63%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
 Frame = -2

Query: 626 RKMVRPMSSRPVGSSATTTLTLENPSPXXXXXXXQ-----TLVLHLSHPPSTKKKVTWKE 462
           R   RP SS    S+ TTTLTLENPSP       Q     TLVL L+     KKKVTWKE
Sbjct: 8   RTRPRPPSS---SSTITTTLTLENPSPSQPQQPQQQQQQTTLVLRLN----PKKKVTWKE 60

Query: 461 GTVDNEFLQRKSSKKCCIF 405
           GTVDNEFLQRKSSKKCCIF
Sbjct: 61  GTVDNEFLQRKSSKKCCIF 79


>gb|AFK37358.1| unknown [Lotus japonicus]
          Length = 124

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 44/120 (36%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
 Frame = -2

Query: 626 RKMVRPMSSRPVGSSATTTLTLENPSPXXXXXXXQTLVLHLSHPP--STKKKVTWKEGTV 453
           R   RP++  P   +ATTT+T++N          +     + + P    KKKV+WKEGTV
Sbjct: 5   RNSTRPVALSPPSITATTTITIQNSDASSSSSQHEQQQPEVLYLPLDRKKKKVSWKEGTV 64

Query: 452 DNEFLQRKSSKKCCIFXXXXXXXXXXXXXXXXXXXSGQSKSHANGSGG-CCSKDSEVGTS 276
           DNEF+Q+KSSKKCCIF                         H +G GG CC    E G S
Sbjct: 65  DNEFMQKKSSKKCCIF-HKEKPFDEDDSDEDDIPHHSDHHPHDHGDGGFCCKNHDEAGPS 123


>gb|ABK26998.1| unknown [Picea sitchensis]
          Length = 116

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = -2

Query: 608 MSSRPVGSSATTTLTLENPSPXXXXXXXQTLVLHLSHPPSTKKKVTWKEGTVDNEFLQRK 429
           M++   GSS+TTT+T+E   P          VL L   P  KKKVTWKEGTV+NEF+ +K
Sbjct: 4   MAAVGTGSSSTTTITVEEGPPQQ--------VLKLRLVPRRKKKVTWKEGTVNNEFMNKK 55

Query: 428 SSKKCCIF 405
           SSKKCC+F
Sbjct: 56  SSKKCCVF 63


>ref|XP_002516330.1| expressed protein, putative [Ricinus communis]
           gi|223544560|gb|EEF46077.1| expressed protein, putative
           [Ricinus communis]
          Length = 124

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 39/71 (54%), Positives = 49/71 (69%)
 Frame = -2

Query: 617 VRPMSSRPVGSSATTTLTLENPSPXXXXXXXQTLVLHLSHPPSTKKKVTWKEGTVDNEFL 438
           +RP+S+ P   + T T+T+EN +        QTLVL L      +KKVTWKEGTVDNEF+
Sbjct: 15  IRPLST-PSAGTVTATVTVENNN-RQQQQPPQTLVLRLKRK---EKKVTWKEGTVDNEFM 69

Query: 437 QRKSSKKCCIF 405
           Q+KSSKKCCIF
Sbjct: 70  QKKSSKKCCIF 80


>ref|NP_001236996.1| uncharacterized protein LOC100527761 [Glycine max]
           gi|255633132|gb|ACU16921.1| unknown [Glycine max]
          Length = 121

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
 Frame = -2

Query: 608 MSSRPVGSSATTTLTLENPSPXXXXXXXQTLVLHLSHPPST--KKKVTWKEGTVDNEFLQ 435
           +SS  + ++ TTT+T+ N  P       +     +   P    KKKV+WKEGTVDNEF+Q
Sbjct: 13  LSSPSITATTTTTITILNSEPSSSSSQQEQQQPEVLFLPLNRKKKKVSWKEGTVDNEFMQ 72

Query: 434 RKSSKKCCIFXXXXXXXXXXXXXXXXXXXSGQSKSHANGSGGCCSKDSEVGTS 276
           +KSSKKCCIF                      S  H + SG CC    E G S
Sbjct: 73  KKSSKKCCIFHKQKPFDEDDSDEDEH-----HSDEHPHDSGFCCKNYDEAGPS 120


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