BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012491
         (1447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   605   e-171
ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi...   572   e-161
ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding...   553   e-155
ref|XP_003595690.1| WD repeat-containing protein [Medicago trunc...   550   e-154
ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding...   549   e-154

>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
            protein 1-like [Vitis vinifera]
          Length = 965

 Score =  605 bits (1560), Expect = e-171
 Identities = 319/457 (69%), Positives = 361/457 (78%), Gaps = 3/457 (0%)
 Frame = +3

Query: 84   RCIKLKESAHKNSNNTNNASFCSILWDLEAKHLVTXXXXXXXXXXHDFVNQNNNSPKILR 263
            R +KL+E AHK+S     ASFCSILWDL A+HL+T          HD +  +N SP+ILR
Sbjct: 4    RSLKLRE-AHKSSGA---ASFCSILWDLRAQHLLTSSSNDLSICIHDPLLPSN-SPQILR 58

Query: 264  HHKDGVTALAISPNSTCLASGSIDHSVKLYRFPGGEFQTNVTRFTLPIRTIAFNKSGSML 443
            HH+DGVTALA+SPNSTCLASGSIDHSVKLY+FPGGEFQTNVTRFTLPIR I+FN+SGS+L
Sbjct: 59   HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNVTRFTLPIRVISFNRSGSIL 118

Query: 444  GAAGDDEGIKLINTIDGSIARVLKGHSGSVTSLAFDPIGEYLSSVDSFGTVVFWELCTGK 623
             AAGDDEGIKLINTIDGSIARVLKGH GSVT LAFDP GEYL+SVDS GTV+ WEL +G 
Sbjct: 119  AAAGDDEGIKLINTIDGSIARVLKGHKGSVTGLAFDPNGEYLASVDSIGTVIQWELHSGT 178

Query: 624  VLYTLKGVAPDSGSDTSVLAVLSWSPDGDALAVPGLKGDVVMYDRDTAEKLFSLKGEHDK 803
             L+ LKG+APD+GSD SVL  LSWSPDG+ LAVPGL+ DVVMYDRDTAEKLFSL+G+H +
Sbjct: 179  ALHILKGIAPDTGSDLSVLNALSWSPDGETLAVPGLRNDVVMYDRDTAEKLFSLRGDHVQ 238

Query: 804  SVCFVSWSPNGKYVATSGLDRQVLIWDVDQRQDIDRQKFDDRISCMAWKPNGNALAVIDV 983
             +CF+SWSPNGKY+AT+GLDRQ+LIWDVDQRQDIDRQKFDDRI CMAWKPNGNALAVIDV
Sbjct: 239  PICFLSWSPNGKYMATAGLDRQILIWDVDQRQDIDRQKFDDRICCMAWKPNGNALAVIDV 298

Query: 984  MGKYGVWESPVPSSMKSPKDGAPSPKSK-SNGLLLFXXXXXXXXQEHGNLGNLSDADEDS 1160
            MGKYGVWES VPSSMKSP +  PS +SK SNGLLLF        QE    G+LSD  EDS
Sbjct: 299  MGKYGVWESAVPSSMKSPTEDVPSLQSKNSNGLLLF----DEDEQEPSASGSLSDLGEDS 354

Query: 1161 FGESELVSRKRLRKQSEYDNMLDEDSDDQLM--LPXXXXXXXXXXXXXETLDYGNDKLQS 1334
             GESE  SRKRLRKQS Y    DED +D L+  LP             E+L+ GN+ L+S
Sbjct: 355  HGESEPPSRKRLRKQSTY----DEDINDDLLSSLPKVESRKKASHSHKESLNNGNEGLKS 410

Query: 1335 LVKPGKPKMQEAFQPGSTPIQTGKRHFLCYNMLGSIT 1445
                 + KMQEAFQPG+TP+Q GKR FLCYNMLGSIT
Sbjct: 411  TTS-ARLKMQEAFQPGATPVQPGKRRFLCYNMLGSIT 446


>ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis]
            gi|223543104|gb|EEF44638.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 775

 Score =  572 bits (1475), Expect = e-161
 Identities = 295/457 (64%), Positives = 350/457 (76%), Gaps = 3/457 (0%)
 Frame = +3

Query: 84   RCIKLKESAHKNSNNTNNASFCSILWDLEAKHLVTXXXXXXXXXXHDFVNQNNNSPKILR 263
            R +KL+E AHK SN  +  SFCSILWD + +HLVT          HD +  +N  P+ILR
Sbjct: 4    RTLKLRE-AHK-SNGGHGPSFCSILWDHQTRHLVTASSSDPTICIHDPLLLSNG-PRILR 60

Query: 264  HHKDGVTALAISPNSTCLASGSIDHSVKLYRFPGGEFQTNVTRFTLPIRTIAFNKSGSML 443
            HH+DGVTAL++SPNSTCLASGSIDHSVKLY+FPGGEF++N+TRFTLPIR +AFNKSGSML
Sbjct: 61   HHRDGVTALSLSPNSTCLASGSIDHSVKLYKFPGGEFESNITRFTLPIRVLAFNKSGSML 120

Query: 444  GAAGDDEGIKLINTIDGSIARVLKGHSGSVTSLAFDPIGEYLSSVDSFGTVVFWELCTGK 623
             AAGDDEGIKLINTIDGSIARVLKGH   VT LAFDP GEYL+SVDS GTV+FWEL +G 
Sbjct: 121  AAAGDDEGIKLINTIDGSIARVLKGHKEPVTGLAFDPNGEYLASVDSTGTVIFWELQSGT 180

Query: 624  VLYTLKGVAPDSGSDTSVLAVLSWSPDGDALAVPGLKGDVVMYDRDTAEKLFSLKGEHDK 803
            VL+TLK VAP +GSDTSV+ V+SWSPDG+ LAVPGL+ DVVMYDRDTAEKLFSL+G+H +
Sbjct: 181  VLHTLKAVAPHTGSDTSVMNVVSWSPDGETLAVPGLRNDVVMYDRDTAEKLFSLRGDHVQ 240

Query: 804  SVCFVSWSPNGKYVATSGLDRQVLIWDVDQRQDIDRQKFDDRISCMAWKPNGNALAVIDV 983
             +CF+SWSPNG+Y+ATSGLD+Q+LIWDVD++QDIDRQKFDDRISCMAWKP GNALAVIDV
Sbjct: 241  PICFLSWSPNGRYMATSGLDKQILIWDVDKKQDIDRQKFDDRISCMAWKPIGNALAVIDV 300

Query: 984  MGKYGVWESPVPSSMKSPKDGAPSPKSK-SNGLLLFXXXXXXXXQEHGNLGNLSDADEDS 1160
             GKYG+WES VPSSMKSP D  P+ +S+ +NGLLLF           G+L +L       
Sbjct: 301  TGKYGLWESVVPSSMKSPTDDIPNLQSRNNNGLLLFEEEEDDEPSISGSLSDL------- 353

Query: 1161 FGESELVSRKRLRKQSEYD--NMLDEDSDDQLMLPXXXXXXXXXXXXXETLDYGNDKLQS 1334
             GESE  SRKRLRK SE+D     +  +D+  + P             + +D GN+ L+S
Sbjct: 354  -GESEPPSRKRLRKHSEFDEEGAREHINDELNLFPKIEPRKKVHRVGKDNMDKGNEGLRS 412

Query: 1335 LVKPGKPKMQEAFQPGSTPIQTGKRHFLCYNMLGSIT 1445
                 K K+QEAFQPG+TP Q GKR FLCYNMLG+IT
Sbjct: 413  TATSTKSKLQEAFQPGATPAQPGKRRFLCYNMLGTIT 449


>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Cucumis
            sativus] gi|449477125|ref|XP_004154937.1| PREDICTED: WD
            repeat and HMG-box DNA-binding protein 1-like [Cucumis
            sativus]
          Length = 962

 Score =  553 bits (1424), Expect = e-155
 Identities = 280/456 (61%), Positives = 342/456 (75%), Gaps = 2/456 (0%)
 Frame = +3

Query: 84   RCIKLKESAHKNSNNTNNASFCSILWDLEAKHLVTXXXXXXXXXXHDFVNQNNNSPKILR 263
            R +KL+E AHK ++N    SFCS+LWD +A H+VT          HD +  +  +PKI+ 
Sbjct: 4    RSVKLRE-AHKAASN-GKPSFCSVLWDQQAYHIVTASSSESAISIHDSLLPST-TPKIIH 60

Query: 264  HHKDGVTALAISPNSTCLASGSIDHSVKLYRFPGGEFQTNVTRFTLPIRTIAFNKSGSML 443
             H++GVTALA+SPNSTCLASGS+D SVKLY+FPGGEF+TN+TRFTLPIR + FNKSGS+L
Sbjct: 61   QHREGVTALALSPNSTCLASGSMDRSVKLYKFPGGEFETNITRFTLPIRILGFNKSGSLL 120

Query: 444  GAAGDDEGIKLINTIDGSIARVLKGHSGSVTSLAFDPIGEYLSSVDSFGTVVFWELCTGK 623
             A GDD+GIKL+NT+DGSIARVLKGH G+VT LAFDP  EYL+SVDS GTV+ WEL +G 
Sbjct: 121  AAGGDDDGIKLVNTVDGSIARVLKGHKGAVTGLAFDPNSEYLASVDSIGTVIIWELQSGS 180

Query: 624  VLYTLKGVAPDSGSDTSVLAVLSWSPDGDALAVPGLKGDVVMYDRDTAEKLFSLKGEHDK 803
            +++ LKG+AP++GSD SV+ VL WSPDG+ LAVPGL+ DVVMYDRDTAEKLFSL+G+H +
Sbjct: 181  IIHNLKGIAPNTGSDPSVMNVLGWSPDGETLAVPGLRNDVVMYDRDTAEKLFSLRGDHTQ 240

Query: 804  SVCFVSWSPNGKYVATSGLDRQVLIWDVDQRQDIDRQKFDDRISCMAWKPNGNALAVIDV 983
             +CF+SWSPNGKY+ATS LDRQ+LIWDVDQ+ DIDRQKFD+RI CMAWKP GNALAVIDV
Sbjct: 241  PICFLSWSPNGKYMATSSLDRQILIWDVDQKLDIDRQKFDERICCMAWKPIGNALAVIDV 300

Query: 984  MGKYGVWESPVPSSMKSPKDGAPSPKSK-SNGLLLFXXXXXXXXQEHGNLGNLSDADEDS 1160
            MGKYGVWES VPSSMK P +  P  +S+ SNGLLLF        +E     N SD  EDS
Sbjct: 301  MGKYGVWESVVPSSMKPPTEDIPKLQSRNSNGLLLF----DEEDEEPSAHENSSDLGEDS 356

Query: 1161 FGESELVSRKRLRKQSEYDNMLDE-DSDDQLMLPXXXXXXXXXXXXXETLDYGNDKLQSL 1337
            + ESE+ +RKRLRK S  D +LDE DS+D  + P             + LD  ++     
Sbjct: 357  YHESEIPTRKRLRKHSTNDEILDEVDSEDFSLFPKLDSRKTSHRVKRDKLDNVDEGAIGK 416

Query: 1338 VKPGKPKMQEAFQPGSTPIQTGKRHFLCYNMLGSIT 1445
                + K QEAFQPG+TP+Q GK+ FLCYNMLGSIT
Sbjct: 417  ATYSRVKQQEAFQPGATPLQPGKKRFLCYNMLGSIT 452


>ref|XP_003595690.1| WD repeat-containing protein [Medicago truncatula]
            gi|355484738|gb|AES65941.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 991

 Score =  550 bits (1416), Expect = e-154
 Identities = 274/455 (60%), Positives = 339/455 (74%), Gaps = 3/455 (0%)
 Frame = +3

Query: 90   IKLKESAHKNSNNTNNASFCSILWDLEAKHLVTXXXXXXXXXXHDFVNQNNNSPKILRHH 269
            ++L +    ++     ASFCS++WD +A+HLVT          H+ +  +  +PKILRHH
Sbjct: 3    VRLMKMREAHTQKGGRASFCSLVWDQKAEHLVTASSSDVSVSIHNPLLPST-APKILRHH 61

Query: 270  KDGVTALAISPNSTCLASGSIDHSVKLYRFPGGEFQTNVTRFTLPIRTIAFNKSGSMLGA 449
            +DGVTALA+SPNSTCLASGS+DHSVKLY+FPGGEF+TN+TRFTLPIR++AFNK GSML A
Sbjct: 62   RDGVTALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKKGSMLAA 121

Query: 450  AGDDEGIKLINTIDGSIARVLKGHSGSVTSLAFDPIGEYLSSVDSFGTVVFWELCTGKVL 629
            AGDDEGIKLINT+DGSIARVLKGH G VT LAFDP GEYL+S+DS GTV+ WEL +GK L
Sbjct: 122  AGDDEGIKLINTVDGSIARVLKGHKGPVTGLAFDPNGEYLASLDSIGTVIIWELHSGKNL 181

Query: 630  YTLKGVAPDSGSDTSVLAVLSWSPDGDALAVPGLKGDVVMYDRDTAEKLFSLKGEHDKSV 809
            + LKG+APD+G D   + VL WSPDG+ LA+PGLK DVVMYDRDTAEKLF+L+G+H + +
Sbjct: 182  HNLKGIAPDTGLDLLTMNVLCWSPDGETLAIPGLKNDVVMYDRDTAEKLFTLRGDHTQPI 241

Query: 810  CFVSWSPNGKYVATSGLDRQVLIWDVDQRQDIDRQKFDDRISCMAWKPNGNALAVIDVMG 989
            CF+ WSPNGKY+ATS LD+Q+LIWDVD++QDIDRQKFD+R+ CM WKP GNALAVIDVMG
Sbjct: 242  CFLCWSPNGKYMATSSLDKQILIWDVDKKQDIDRQKFDERVCCMTWKPIGNALAVIDVMG 301

Query: 990  KYGVWESPVPSSMKSPKDGAPSPKSKSNGLLLFXXXXXXXXQEHGNLGNLSDADEDSFGE 1169
            KYG+W++ +PSSMKSP +  P     SNGLLLF        +++   G+LSD  E+S GE
Sbjct: 302  KYGIWDNVIPSSMKSPTEDIPMLGKNSNGLLLF----DEEEEDNSVSGSLSDLGENSNGE 357

Query: 1170 SE-LVSRKRLRKQSEYDNMLDEDSDDQ--LMLPXXXXXXXXXXXXXETLDYGNDKLQSLV 1340
             E   SRKRLRK S  +  LDED ++    + P             E L+ G+   +S +
Sbjct: 358  FEPPTSRKRLRKHSFSEENLDEDGEEYGIDLFPKVESHKKRNRSVKENLNNGSVGFRSTM 417

Query: 1341 KPGKPKMQEAFQPGSTPIQTGKRHFLCYNMLGSIT 1445
               K KMQEAFQ G+TP+Q GKR FLCYNMLGSIT
Sbjct: 418  VTSKTKMQEAFQSGATPVQPGKRRFLCYNMLGSIT 452


>ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Glycine
            max]
          Length = 994

 Score =  549 bits (1415), Expect = e-154
 Identities = 279/455 (61%), Positives = 339/455 (74%), Gaps = 1/455 (0%)
 Frame = +3

Query: 84   RCIKLKESAHKNSNNTNNASFCSILWDLEAKHLVTXXXXXXXXXXHDFVNQNNNSPKILR 263
            R +KLKE+   ++     ASFCS+LWD +AKHLVT          HD +  +  +PK LR
Sbjct: 4    RSMKLKEA---HAAKGGPASFCSVLWDQKAKHLVTASSSDVAVCIHDPLFPSF-APKTLR 59

Query: 264  HHKDGVTALAISPNSTCLASGSIDHSVKLYRFPGGEFQTNVTRFTLPIRTIAFNKSGSML 443
            HH+DGVTALA+SPNSTCLASGS+DHSVKLY++PGGEF+ N+TRFTLPIR++AFNKSGSML
Sbjct: 60   HHRDGVTALALSPNSTCLASGSVDHSVKLYKYPGGEFERNITRFTLPIRSLAFNKSGSML 119

Query: 444  GAAGDDEGIKLINTIDGSIARVLKGHSGSVTSLAFDPIGEYLSSVDSFGTVVFWELCTGK 623
             AAGDDEGIKLINT DG+IARVLKGH GS+T LAFDP GEYL+S+D  GTV+ WEL +GK
Sbjct: 120  AAAGDDEGIKLINTFDGTIARVLKGHKGSITGLAFDPNGEYLASLDLTGTVILWELQSGK 179

Query: 624  VLYTLKGVAPDSGSDTSVLAVLSWSPDGDALAVPGLKGDVVMYDRDTAEKLFSLKGEHDK 803
            +++ LKG+AP +G D S + VL WSPDG+ LAVPGLK DVVMYDRDTAEK+F L+G+H +
Sbjct: 180  IIHNLKGIAPGTGLDVSTMNVLCWSPDGETLAVPGLKNDVVMYDRDTAEKVFFLRGDHIQ 239

Query: 804  SVCFVSWSPNGKYVATSGLDRQVLIWDVDQRQDIDRQKFDDRISCMAWKPNGNALAVIDV 983
             +CF+ WSPNG+Y+ATSGLDRQVLIWDV ++QDIDRQKFD+R+ CMAWKP GNALAVIDV
Sbjct: 240  PICFLCWSPNGEYIATSGLDRQVLIWDVSKKQDIDRQKFDERVCCMAWKPTGNALAVIDV 299

Query: 984  MGKYGVWESPVPSSMKSPKDGAPSPKSKSNGLLLFXXXXXXXXQEHGNLGNLSDADEDSF 1163
            MGKYG+W++ +PSSMKSP    P  K+KSNG++ F         E+   GNLSD   +S 
Sbjct: 300  MGKYGIWDNVIPSSMKSPTKDIP-VKNKSNGVVYF----DEEDPENSASGNLSDIGGNSN 354

Query: 1164 GESELVSRKRLRKQSEYDNMLDEDSDDQLM-LPXXXXXXXXXXXXXETLDYGNDKLQSLV 1340
             ESE  SRKR RK S  +  L ED  ++++                E LD GN   +S +
Sbjct: 355  EESEPPSRKRSRKHSLSEENLGEDGGEEIVSYLKVDTHKKRNRSGKENLDSGNMGFRSTM 414

Query: 1341 KPGKPKMQEAFQPGSTPIQTGKRHFLCYNMLGSIT 1445
               K KMQEAFQPGSTP+Q GKRHFLCYNMLG IT
Sbjct: 415  VTSKAKMQEAFQPGSTPVQPGKRHFLCYNMLGCIT 449