BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012463
         (1357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin...   296   8e-78
emb|CBI38961.3| unnamed protein product [Vitis vinifera]              276   1e-71
ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containin...   233   7e-59
ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containin...   223   9e-56
ref|NP_001185401.1| zinc finger CCCH domain-containing protein 1...   213   7e-53

>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like [Vitis
            vinifera]
          Length = 383

 Score =  296 bits (758), Expect = 8e-78
 Identities = 171/386 (44%), Positives = 217/386 (56%), Gaps = 19/386 (4%)
 Frame = -3

Query: 1283 NNKKETCRNFASGSCRFGDRCKFSH--------DIHTXXXXXXXXXXXPXXXXXXXXXXX 1128
            N KKE CRNF  GSC++G+RCKF H        ++                         
Sbjct: 2    NRKKEPCRNFQRGSCQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPFG 61

Query: 1127 XXXXXXXXXXXFENTWTRGEP--AGTNNVTKQPSNDQTPVSNHTCNDPESCKRIIVDDFK 954
                       FEN WTR  P   G+++ + + S++Q   +NH C DPESCKR IV+DF+
Sbjct: 62   FGVQSNSLPKPFENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCKRQIVEDFE 121

Query: 953  TERPIWKLTCYAHWRHLPCDIWGDVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVM 774
             ERPIWKLTCY H +  PCDI GD+SYEELR AAYDDA +GLSL S+VERER++LNSK++
Sbjct: 122  HERPIWKLTCYGHCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVERERSLLNSKLI 181

Query: 773  QFENLQRNPYVISPNTTIGGAIPFPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNT 594
            +F++L R PY   PN+T+  AI  PA N  A     Q N PPS SSFSQL    N G  T
Sbjct: 182  EFDSLLRKPYAAPPNSTL--AIQSPAPNPDASSLTAQNNTPPSASSFSQLSTSPNMGFGT 239

Query: 593  SVVASTNSIFGQKSVPPVSTQPSGSFGSNNLTFGTQGLLGSQQHMQQQGN---GNASSF- 426
                 +N+ FGQ +    S+Q SG+FG+NNL FG  G  GSQ  +Q  G+    N + F 
Sbjct: 240  RPSTPSNNAFGQSNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMHGSPLPSNTAGFS 299

Query: 425  --NMPFSSGKNNPTLFAGSFQSSNVAINQSPVLSVGHNPPASLGGQTYVD---RSPEGVP 261
              NM   S   +P   A S Q  + A NQSP+LS G N   S     +        +   
Sbjct: 300  HNNMSAGSKAFSPP--AASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEKMQRDNFS 357

Query: 260  TAMAIWLKEKWNPGEIPEEAPPDSYV 183
              M+IWLKE+WNPGEIPEE PPD++V
Sbjct: 358  GDMSIWLKEEWNPGEIPEEEPPDAFV 383


>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  276 bits (705), Expect = 1e-71
 Identities = 153/314 (48%), Positives = 194/314 (61%), Gaps = 11/314 (3%)
 Frame = -3

Query: 1091 ENTWTRGEP--AGTNNVTKQPSNDQTPVSNHTCNDPESCKRIIVDDFKTERPIWKLTCYA 918
            EN WTR  P   G+++ + + S++Q   +NH C DPESCKR IV+DF+ ERPIWKLTCY 
Sbjct: 85   ENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCKRQIVEDFEHERPIWKLTCYG 144

Query: 917  HWRHLPCDIWGDVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQRNPYVI 738
            H +  PCDI GD+SYEELR AAYDDA +GLSL S+VERER++LNSK+++F++L R PY  
Sbjct: 145  HCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVERERSLLNSKLIEFDSLLRKPYAA 204

Query: 737  SPNTTIGGAIPFPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNTSVVASTNSIFGQ 558
             PN+T+  AI  PA N  A     Q N PPS SSFSQL    N G  T     +N+ FGQ
Sbjct: 205  PPNSTL--AIQSPAPNPDASSLTAQNNTPPSASSFSQLSTSPNMGFGTRPSTPSNNAFGQ 262

Query: 557  KSVPPVSTQPSGSFGSNNLTFGTQGLLGSQQHMQQQGN---GNASSF---NMPFSSGKNN 396
             +    S+Q SG+FG+NNL FG  G  GSQ  +Q  G+    N + F   NM   S   +
Sbjct: 263  SNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMHGSPLPSNTAGFSHNNMSAGSKAFS 322

Query: 395  PTLFAGSFQSSNVAINQSPVLSVGHNPPASLGGQTYVD---RSPEGVPTAMAIWLKEKWN 225
            P   A S Q  + A NQSP+LS G N   S     +        +     M+IWLKE+WN
Sbjct: 323  PP--AASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEKMQRDNFSGDMSIWLKEEWN 380

Query: 224  PGEIPEEAPPDSYV 183
            PGEIPEE PPD++V
Sbjct: 381  PGEIPEEEPPDAFV 394


>ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
            [Cucumis sativus]
          Length = 360

 Score =  233 bits (595), Expect = 7e-59
 Identities = 142/368 (38%), Positives = 183/368 (49%), Gaps = 3/368 (0%)
 Frame = -3

Query: 1277 KKETCRNFASGSCRFGDRCKFSHDIHTXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXX 1098
            KK+ CR+F  G+C++G+RCKF H                                     
Sbjct: 4    KKQPCRDFQRGTCQYGERCKFLHATQQAQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYK 63

Query: 1097 XFENTWTRGEPAGTNNVTKQPSNDQTPVSNHTCNDPESCKRIIVDDFKTERPIWKLTCYA 918
             FEN WTR      N  +++P N   P SNH C D ESCKR I +DF+ ERP+WKLTCY 
Sbjct: 64   PFENKWTRPSTPAGNAQSRKPDN-HLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYG 122

Query: 917  HWRHLPCDIWGDVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQRNPYVI 738
            H ++ PCDI GDVSYEELR  AYD+AK+G+SL S+VERERN+LNSK+ +FE L   PYV 
Sbjct: 123  HNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLLKPYVT 182

Query: 737  SPNTTIGGAIPFPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNTSVVASTNSIFGQ 558
              N   G    F   N+ +   P  +N  PS+SSFSQLG   N G         N++FGQ
Sbjct: 183  PSNRAPGNQSSFSGTNSPSI-LPSAQNNTPSLSSFSQLGASLNTGFGARPSNPHNTVFGQ 241

Query: 557  KSVPPVSTQPSGSFGSNNLTFGTQGLLGSQQHMQQQGN-GNASSFNMPFSSGKNNPTLFA 381
            +       Q S  FG  N    +   +G     Q  GN    S F++     KN     A
Sbjct: 242  QVQFSSPVQNSSGFGMTNFPSTSVVAVGGGVGSQTFGNFSTLSGFDI-----KN-----A 291

Query: 380  GSFQSSNVAINQSPVLSVGHNPPASL--GGQTYVDRSPEGVPTAMAIWLKEKWNPGEIPE 207
            GS   S+ A+   P  +   +    +    Q       E     + IW+KEKW PGEIPE
Sbjct: 292  GSNIFSSAALTNLPPTNANSSASGQIAPNAQLVNKLQQENSSVDVDIWMKEKWVPGEIPE 351

Query: 206  EAPPDSYV 183
             APPD+ +
Sbjct: 352  MAPPDAVI 359


>ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
            [Cucumis sativus]
          Length = 377

 Score =  223 bits (568), Expect = 9e-56
 Identities = 138/357 (38%), Positives = 176/357 (49%), Gaps = 3/357 (0%)
 Frame = -3

Query: 1244 SCRFGDRCKFSHDIHTXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXFENTWTRGEP 1065
            SC++G+RCKF H                                      FEN WTR   
Sbjct: 32   SCQYGERCKFLHATQQAQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPST 91

Query: 1064 AGTNNVTKQPSNDQTPVSNHTCNDPESCKRIIVDDFKTERPIWKLTCYAHWRHLPCDIWG 885
               N  +++P N   P SNH C D ESCKR I +DF+ ERP+WKLTCY H ++ PCDI G
Sbjct: 92   PTGNAQSRKPDN-HLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVG 150

Query: 884  DVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQRNPYVISPNTTIGGAIP 705
            DVSYEELR  AYD+AK+G+SL S+VERERN+LNSK+ +FE L   PYV   N   G    
Sbjct: 151  DVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLLKPYVTPSNRAPGNQSS 210

Query: 704  FPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNTSVVASTNSIFGQKSVPPVSTQPS 525
            F   N+ +   P  +N  PS+SSFSQLG   N G         N++FGQ+       Q S
Sbjct: 211  FSGTNSPSI-LPSAQNNTPSLSSFSQLGASLNTGFGARPSNPHNTVFGQQVQFSSPVQNS 269

Query: 524  GSFGSNNLTFGTQGLLGSQQHMQQQGN-GNASSFNMPFSSGKNNPTLFAGSFQSSNVAIN 348
              FG  N    +   +G     Q  GN    S F++     KN     AGS   S+ A+ 
Sbjct: 270  SGFGMTNFPSTSVVAVGGGVGSQTFGNFSTLSGFDI-----KN-----AGSNIFSSAALT 319

Query: 347  QSPVLSVGHNPPASL--GGQTYVDRSPEGVPTAMAIWLKEKWNPGEIPEEAPPDSYV 183
              P  +   +    +    Q      PE     + IW+KEKW PGEIPE APPD+ +
Sbjct: 320  NLPPTNANSSASGQIAPNAQLVNKLQPENSSVDVDIWMKEKWVPGEIPEMAPPDAVI 376


>ref|NP_001185401.1| zinc finger CCCH domain-containing protein 16 [Arabidopsis thaliana]
            gi|332197583|gb|AEE35704.1| zinc finger CCCH
            domain-containing protein 16 [Arabidopsis thaliana]
          Length = 398

 Score =  213 bits (543), Expect = 7e-53
 Identities = 142/408 (34%), Positives = 191/408 (46%), Gaps = 43/408 (10%)
 Frame = -3

Query: 1277 KKETCRNFASGS--------------------CRFGDRCKFSHDIHTXXXXXXXXXXXPX 1158
            +KE CRNF  GS                    CR+G+ C+F H                 
Sbjct: 2    RKELCRNFQRGSLGFVFYILGFNLKSIDVRRCCRYGENCRFLHPQQAKPNNPFGFGTQNQ 61

Query: 1157 XXXXXXXXXXXXXXXXXXXXXF--------ENTWTRGEPAGTNN---VTKQPSNDQTPVS 1011
                                          +NTW+R     T      + Q +  QT  +
Sbjct: 62   QQQQQQQQQNSSNPFGFGVQSGGSSRPNQFQNTWSRTASTPTGGGAAASTQQTGKQTQPA 121

Query: 1010 NHTCNDPESCKRIIVDDFKTERPIWKLTCYAHWRHLPCDIWGDVSYEELRAAAYDDAKKG 831
            +H C DP +CKR++ DDFK ERP+WKLTCY HW++ PCD+ GD+SYEELRA AY++AK+G
Sbjct: 122  DHKCTDPAACKRVMQDDFKNERPMWKLTCYGHWKYFPCDVTGDISYEELRAVAYEEAKRG 181

Query: 830  LSLLSVVERERNMLNSKVMQFENLQRNPYVISPNTTIGGAIPFPAINNSAFPAPVQKNAP 651
            + L S+VERERN+ NSK+ +FEN  RNPY     +      PF A   S FP   Q N+P
Sbjct: 182  IPLQSIVERERNLQNSKIAEFENFLRNPY---KGSVTANQSPFAATTPSIFPQSSQINSP 238

Query: 650  -PSVSSFSQLGI--PTNQGSNTS-----VVASTN---SIFGQKSVPPVSTQPSGSFGSNN 504
             P+ S F+Q      TN G  +S       AS N   + F   +  PV + PSG F +N 
Sbjct: 239  SPAFSGFNQQTAFSNTNAGGLSSSGPPNAFASFNKQPNAFSVNTPQPVPSGPSG-FQTNP 297

Query: 503  LTFGTQGLLGSQQHMQQQGNGNASSFNMPFSSGKNNPTLFAGSFQSSNVAIN-QSPVLSV 327
             T       G        G G A++       G++ PT    + Q++  A N   PV S 
Sbjct: 298  STTFKPASFG-------PGPGFATTPQNNNIFGQSTPTPATNTSQNNQTAFNFNVPVASF 350

Query: 326  GHNPPASLGGQTYVDRSPEGVPTAMAIWLKEKWNPGEIPEEAPPDSYV 183
                  +    +  +    G P   +IWLKEKWNPGEIPE+APPD++V
Sbjct: 351  TAPAINTTNTSSGTELQIGGDPVDSSIWLKEKWNPGEIPEQAPPDAFV 398