BLASTX nr result

ID: Coptis23_contig00012450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012450
         (1743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280631.2| PREDICTED: uncharacterized protein LOC100255...    86   3e-14
emb|CBI19805.3| unnamed protein product [Vitis vinifera]               86   3e-14
ref|XP_002307701.1| hypothetical protein POPTRDRAFT_73001 [Popul...    84   2e-13
ref|XP_002300727.1| hypothetical protein POPTRDRAFT_643019 [Popu...    80   2e-12
ref|XP_002510487.1| lysine-specific histone demethylase, putativ...    77   1e-11

>ref|XP_002280631.2| PREDICTED: uncharacterized protein LOC100255769 [Vitis vinifera]
          Length = 2145

 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 47/112 (41%), Positives = 62/112 (55%)
 Frame = -1

Query: 342 QSKESCVASVGSPIPSQDLLHVKEDVNETCSDSIMLEPGETFPEYAGKAFDSDNKDTKLE 163
           Q++ S  AS G  +P  D L   E+ N   S SI  +  + +PE AG   D + +D K  
Sbjct: 653 QNQPSHDASRGDHVPIHDYLSASEEANGASSPSITPDKNDAYPEDAGSMPDPEIQDNKSS 712

Query: 162 AMQRDVRKIKKRRHGDMAYEGDTDWEFLIQEQGLFGNRDIFNDDRPERERGK 7
           + QR +RK KK R  DMAYEGD DWE LI EQ    +  + + D+P R RGK
Sbjct: 713 SAQRTLRKPKKHRQRDMAYEGDADWEILIHEQSFPQSHLVEDTDQPLRTRGK 764


>emb|CBI19805.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 47/112 (41%), Positives = 62/112 (55%)
 Frame = -1

Query: 342 QSKESCVASVGSPIPSQDLLHVKEDVNETCSDSIMLEPGETFPEYAGKAFDSDNKDTKLE 163
           Q++ S  AS G  +P  D L   E+ N   S SI  +  + +PE AG   D + +D K  
Sbjct: 267 QNQPSHDASRGDHVPIHDYLSASEEANGASSPSITPDKNDAYPEDAGSMPDPEIQDNKSS 326

Query: 162 AMQRDVRKIKKRRHGDMAYEGDTDWEFLIQEQGLFGNRDIFNDDRPERERGK 7
           + QR +RK KK R  DMAYEGD DWE LI EQ    +  + + D+P R RGK
Sbjct: 327 SAQRTLRKPKKHRQRDMAYEGDADWEILIHEQSFPQSHLVEDTDQPLRTRGK 378


>ref|XP_002307701.1| hypothetical protein POPTRDRAFT_73001 [Populus trichocarpa]
           gi|222857150|gb|EEE94697.1| hypothetical protein
           POPTRDRAFT_73001 [Populus trichocarpa]
          Length = 1669

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 47/98 (47%), Positives = 55/98 (56%)
 Frame = -1

Query: 297 SQDLLHVKEDVNETCSDSIMLEPGETFPEYAGKAFDSDNKDTKLEAMQRDVRKIKKRRHG 118
           S D L + E+ N     S+  E  E++PE A    DSD KD  L A+ R +RK KKRR G
Sbjct: 507 SLDYLSINEEANGPSPRSLTPEENESYPEDAVSVPDSDIKDGHLAAVHRAMRKPKKRRLG 566

Query: 117 DMAYEGDTDWEFLIQEQGLFGNRDIFNDDRPERERGKS 4
           DMAYEGD DWE LI EQ    N  +   DR  R R KS
Sbjct: 567 DMAYEGDADWETLINEQQFLENYQVVESDRSFRTREKS 604


>ref|XP_002300727.1| hypothetical protein POPTRDRAFT_643019 [Populus trichocarpa]
           gi|222842453|gb|EEE80000.1| hypothetical protein
           POPTRDRAFT_643019 [Populus trichocarpa]
          Length = 1655

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 47/98 (47%), Positives = 53/98 (54%)
 Frame = -1

Query: 297 SQDLLHVKEDVNETCSDSIMLEPGETFPEYAGKAFDSDNKDTKLEAMQRDVRKIKKRRHG 118
           S D L + E+ N     S+  E  E++ E A     SD KD  L A+QR VRK KKRR G
Sbjct: 499 SLDYLSINEEANGLSPRSVTPEENESYLEDAVLVPGSDIKDGHLAAVQRAVRKAKKRRLG 558

Query: 117 DMAYEGDTDWEFLIQEQGLFGNRDIFNDDRPERERGKS 4
           DMAYEGD DWE LI EQ    N      DR  R R KS
Sbjct: 559 DMAYEGDADWEILINEQQFLENDHALESDRSLRAREKS 596


>ref|XP_002510487.1| lysine-specific histone demethylase, putative [Ricinus communis]
            gi|223551188|gb|EEF52674.1| lysine-specific histone
            demethylase, putative [Ricinus communis]
          Length = 1947

 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 96/404 (23%), Positives = 155/404 (38%), Gaps = 57/404 (14%)
 Frame = -1

Query: 1044 TGTVLREKSEVSHNDES--------SRLINVPEDHLVCPDSLNQQNGAGSMSILSRQLEE 889
            T   +R+ S   H   S        S    + +++++ P  LN Q G       ++++ +
Sbjct: 270  TSDKIRKSSHQRHGRSSVIFYPSSVSHCSRIQDENMLDPSVLNVQEGPVVHPCSTQRICD 329

Query: 888  SSCPAN-QKSCKETPGLQNGLKQCSE------------------VEGIISTEYDGDGANF 766
             +C  + Q+   ET  L++GLK C+                   V+      + G G + 
Sbjct: 330  GNCSVSGQEDSLETLSLKSGLKLCTTGMAKFFVTDDVKEPTLAAVKSECIEGFSGHGFDK 389

Query: 765  GEKLSGSRVILGEDVSVPRTDDNALNLLFEGKCHCNGSDHDTCIKQASENAFELSD---- 598
              K +  ++  G   +     +N ++     K      D +   K +  ++ ++ D    
Sbjct: 390  DIKDACDQISEGVSTACISNVENQISFSSSRKKISPPWDDELMNKSSKSSSSKIYDPAYE 449

Query: 597  ---------NKKTSPLLPKVDSEVTVRYDKLGQP---------YCETETPLTHSVSMVPS 472
                     N   + L    D++ T+   K+ +          YCE   P   SVS    
Sbjct: 450  RILDGTLKVNSTRNHLKKDKDADSTIVSPKVEETCGACNDPNAYCEKSYPA--SVSPKKE 507

Query: 471  MAQTSSVGLQSVFVPSIKEGLSTTNDVCYHSSNSFGPNFATDLQ---SKESCVASVGSPI 301
                S+  L S+   S +   +          NS   +FA       S E C       +
Sbjct: 508  AGAISNGKLSSITAMSNEVHKAACTFQMNRQGNSL-ESFARPNDPSISTEKCSTVCHQNV 566

Query: 300  PSQDLLHVK-----EDVNETCSDSIMLEPGETFPEYAGKAFDSDNKDTKLEAMQRDVRKI 136
             S D++        + +NE  + SI  E  E+  E A    DS+ KD K  ++QR  RK 
Sbjct: 567  SSDDVMKGNCFPSHDFINEEMTQSITPEENESCHEDAVSIPDSEIKDGKSSSVQRGSRKT 626

Query: 135  KKRRHGDMAYEGDTDWEFLIQEQGLFGNRDIFNDDRPERERGKS 4
            KKRRHGDMAYEGD DWE L+ +Q         + DR  R R KS
Sbjct: 627  KKRRHGDMAYEGDPDWEILVNDQRYPEGEQAVDGDRCFRTREKS 670


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