BLASTX nr result

ID: Coptis23_contig00012440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012440
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274731.2| PREDICTED: (+)-neomenthol dehydrogenase-like...   368   1e-99
emb|CBI24696.3| unnamed protein product [Vitis vinifera]              359   5e-97
gb|AAR96014.1| putative short-chain hydrogenase/reductase [Musa ...   356   6e-96
ref|XP_002330650.1| predicted protein [Populus trichocarpa] gi|2...   350   3e-94
emb|CAD41255.1| OSJNBa0067K08.7 [Oryza sativa Japonica Group] gi...   338   2e-90

>ref|XP_002274731.2| PREDICTED: (+)-neomenthol dehydrogenase-like [Vitis vinifera]
          Length = 298

 Score =  368 bits (945), Expect = 1e-99
 Identities = 178/269 (66%), Positives = 212/269 (78%)
 Frame = +2

Query: 89  RWWSKDTIAVVTGGNTGIGFALVKRLAELGVTVVLTCRDESKGEKAVESLSLQGLHVKFF 268
           RWWSKDT+A+VTG N GIGFALVKRLAE G+TV+LT RDE++G KA++SL+ QGLHV F 
Sbjct: 20  RWWSKDTVAIVTGANKGIGFALVKRLAESGLTVILTARDEARGLKALQSLAAQGLHVHFS 79

Query: 269 RLDLLEHSSIKALVSWLSETFGGLDILVNNAAVSLKEIGENSVEHAETVINTNYYGPKLL 448
            LD+    SI+   SW   +F  LDILVNNA VS   I ENSVEHAE VI TNYYGPK+L
Sbjct: 80  LLDVSNPDSIQTFASWFQHSFRKLDILVNNAGVSFNNINENSVEHAEVVIKTNYYGPKML 139

Query: 449 TEALLPLFRLSAYKSRILNISSRLGLLNKVSNLGVRKILEDEENLSEERISYVVRRFLED 628
            EALLP+FR S+  SRILNISSRLGLLNK+ N  +++IL DEE LS+++I  +V  FLE+
Sbjct: 140 IEALLPMFRRSSSVSRILNISSRLGLLNKLKNPNIKEILLDEEKLSKDQIDRIVSMFLEN 199

Query: 629 VKNGVWDKNGWPEVWTDYAVSKLALNAYSKIVAKRCDGNGLSVNCYCPGFTRTSMTRGQG 808
           VK G W   GWPE+WTDYAVSKLALNAYS+++AKR  G GLSVNC+CPGFT+T+MT G+G
Sbjct: 200 VKTGTWKNQGWPEIWTDYAVSKLALNAYSRVLAKRYKGCGLSVNCFCPGFTQTTMTGGKG 259

Query: 809 KHTPDYVADVGARLVLLPPHELPTGKFYV 895
            HT D  A +GARL LLPP ELPTGKFY+
Sbjct: 260 NHTADAAASIGARLALLPPEELPTGKFYL 288


>emb|CBI24696.3| unnamed protein product [Vitis vinifera]
          Length = 302

 Score =  359 bits (922), Expect = 5e-97
 Identities = 178/284 (62%), Positives = 214/284 (75%), Gaps = 10/284 (3%)
 Frame = +2

Query: 74  SSFITRWWSKDTIAVVTGGNTGIGFALVKRLAELGVTVVLTCRDESKGEKAVESLSLQGL 253
           S + + WWSKDT+A+VTG N GIGFALVKRLAE G+TV+LT RDE++G KA++SL+ QGL
Sbjct: 9   SLYFSVWWSKDTVAIVTGANKGIGFALVKRLAESGLTVILTARDEARGLKALQSLAAQGL 68

Query: 254 HVKFFRLDLLEHSSIKALVSWLSETFGGLDILVNNAAVSLKEIGENSVEHAETVINTNYY 433
           HV F  LD+    SI+   SW   +F  LDILVNNA VS   I ENSVEHAE VI TNYY
Sbjct: 69  HVHFSLLDVSNPDSIQTFASWFQHSFRKLDILVNNAGVSFNNINENSVEHAEVVIKTNYY 128

Query: 434 GPKLLTEALLPLFRLSAYKSRILNISSRLGLLN----------KVSNLGVRKILEDEENL 583
           GPK+L EALLP+FR S+  SRILNISSRLGLLN          K+ N  +++IL DEE L
Sbjct: 129 GPKMLIEALLPMFRRSSSVSRILNISSRLGLLNKLKNPNTNSIKLKNPNIKEILLDEEKL 188

Query: 584 SEERISYVVRRFLEDVKNGVWDKNGWPEVWTDYAVSKLALNAYSKIVAKRCDGNGLSVNC 763
           S+++I  +V  FLE+VK G W   GWPE+WTDYAVSKLALNAYS+++AKR  G GLSVNC
Sbjct: 189 SKDQIDRIVSMFLENVKTGTWKNQGWPEIWTDYAVSKLALNAYSRVLAKRYKGCGLSVNC 248

Query: 764 YCPGFTRTSMTRGQGKHTPDYVADVGARLVLLPPHELPTGKFYV 895
           +CPGFT+T+MT G+G HT D  A +GARL LLPP ELPTGKFY+
Sbjct: 249 FCPGFTQTTMTGGKGNHTADAAASIGARLALLPPEELPTGKFYL 292


>gb|AAR96014.1| putative short-chain hydrogenase/reductase [Musa acuminata]
          Length = 308

 Score =  356 bits (913), Expect = 6e-96
 Identities = 180/283 (63%), Positives = 216/283 (76%), Gaps = 14/283 (4%)
 Frame = +2

Query: 86  TRWWSKDTIAVVTGGNTGIGFALVKRLAELGVTVVLTCRDESKGEKAVESLSLQGLHVKF 265
           TRWWSK+T+AVVTG N GIGFALVKRLAELG+TVVLT RD  KG+ AVESL  QG+HV F
Sbjct: 15  TRWWSKETVAVVTGANKGIGFALVKRLAELGLTVVLTSRDVGKGKAAVESLDGQGIHVAF 74

Query: 266 FRLDLLEHSSIKALVSWLSETFGGLDILVNNAAVSLKEIGENSVEHAETVINTNYYGPKL 445
             LD+ E SSI    +WL   FGGLDIL+NNAAVS  EI  NSVEHAETVI TN+YGPK+
Sbjct: 75  CHLDVAEPSSIVTFAAWLERRFGGLDILINNAAVSFNEIDTNSVEHAETVIRTNFYGPKM 134

Query: 446 LTEALLPLFRLS-AYKSRILNISSRLGLLN-------------KVSNLGVRKILEDEENL 583
           L E+LLPLFR S A  SRILNISS+LGLLN             KV N  ++++L+DEE L
Sbjct: 135 LIESLLPLFRRSIATSSRILNISSQLGLLNAVNQSHVSLCALQKVRNPALKELLQDEEIL 194

Query: 584 SEERISYVVRRFLEDVKNGVWDKNGWPEVWTDYAVSKLALNAYSKIVAKRCDGNGLSVNC 763
           +   +  +V +FL  VK G W + GWP VWTDY+VSKLALNAYS+++AK+ +G GLSVNC
Sbjct: 195 TVAAVERMVSQFLHHVKMGTWREEGWPTVWTDYSVSKLALNAYSRLLAKQQEGRGLSVNC 254

Query: 764 YCPGFTRTSMTRGQGKHTPDYVADVGARLVLLPPHELPTGKFY 892
           +CPGFTRTSMTRG+G  +P+  A+VGA+L LLPPH+LPTGKF+
Sbjct: 255 FCPGFTRTSMTRGRGSRSPEEAAEVGAKLALLPPHQLPTGKFF 297


>ref|XP_002330650.1| predicted protein [Populus trichocarpa] gi|222872254|gb|EEF09385.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  350 bits (898), Expect = 3e-94
 Identities = 172/272 (63%), Positives = 214/272 (78%)
 Frame = +2

Query: 89  RWWSKDTIAVVTGGNTGIGFALVKRLAELGVTVVLTCRDESKGEKAVESLSLQGLHVKFF 268
           RWWSKDT+A+VTG N GIGF+LVK+LA+LG+TV+LT RD  KG  AVE L   GLHV F+
Sbjct: 3   RWWSKDTVAMVTGANKGIGFSLVKQLAQLGLTVILTARDVEKGNSAVELLKSHGLHVHFY 62

Query: 269 RLDLLEHSSIKALVSWLSETFGGLDILVNNAAVSLKEIGENSVEHAETVINTNYYGPKLL 448
           RLD+ + +S+K L SW  + FG LDIL+NNAAVS  +I ENSV+HAE VI TN+YG KLL
Sbjct: 63  RLDVSDPASVKTLASWFQKKFGVLDILINNAAVSFNDIYENSVDHAEIVIKTNFYGVKLL 122

Query: 449 TEALLPLFRLSAYKSRILNISSRLGLLNKVSNLGVRKILEDEENLSEERISYVVRRFLED 628
           TEALLP+FRLS   SRILNISSRLG +NK+ N  ++++L + E LS + I  +V  FLE+
Sbjct: 123 TEALLPMFRLSDSISRILNISSRLGSINKMRNPKMKEMLLN-ERLSAQEIEGMVNLFLEN 181

Query: 629 VKNGVWDKNGWPEVWTDYAVSKLALNAYSKIVAKRCDGNGLSVNCYCPGFTRTSMTRGQG 808
           V++G W   GWPE+WTDYAVSKLALNAYS+++AK+ +  GLSVNC+CPGFT+TSMT G+G
Sbjct: 182 VRDGTWKNQGWPEIWTDYAVSKLALNAYSRVLAKQYEDFGLSVNCFCPGFTQTSMTSGKG 241

Query: 809 KHTPDYVADVGARLVLLPPHELPTGKFYVTSN 904
            HT D  A+VGARL LLPP ELPTG+FY+  N
Sbjct: 242 THTADDAAEVGARLALLPPGELPTGRFYIGFN 273


>emb|CAD41255.1| OSJNBa0067K08.7 [Oryza sativa Japonica Group]
           gi|116310688|emb|CAH67487.1| H0306B06.2 [Oryza sativa
           Indica Group] gi|218195129|gb|EEC77556.1| hypothetical
           protein OsI_16477 [Oryza sativa Indica Group]
          Length = 294

 Score =  338 bits (866), Expect = 2e-90
 Identities = 165/279 (59%), Positives = 207/279 (74%), Gaps = 2/279 (0%)
 Frame = +2

Query: 62  SQSSSSFITRWWSKDTIAVVTGGNTGIGFALVKRLAELGVTVVLTCRDESKGEKAVESLS 241
           S    S    WW+++T+AVVTG N GIG AL  RL E G+TVVLT RD  +GE A  +L 
Sbjct: 5   SSKEPSSARAWWTRETVAVVTGANRGIGLALAARLGEHGITVVLTARDAERGEAAAAALR 64

Query: 242 LQGLHVKFFRLDLLEHSSIKALVSWLSETFGGLDILVNNAAVSLKEIGENSVEHAETVIN 421
            +GLHV F RLD+ + +S++A  +WL +  GGLDILVNNAAVS  EI  NSVEHAETV+ 
Sbjct: 65  ARGLHVVFHRLDVADPASVQAFAAWLRDAIGGLDILVNNAAVSFNEIDTNSVEHAETVLR 124

Query: 422 TNYYGPKLLTEALLPLFRLSAYKSRILNISSRLGLLNKVSNLGVRKILEDEENLSEERIS 601
           TN+YG K+LTEALLPLFR S   SRILNISS+LGLLNKVS+  ++++L+DEE L+E  + 
Sbjct: 125 TNFYGAKMLTEALLPLFRRSPATSRILNISSQLGLLNKVSDPELKRLLQDEERLTEAEVE 184

Query: 602 YVVRRFLEDVKNGVWDKNGWPEVWTDYAVSKLALNAYSKIVAKRCDGNG--LSVNCYCPG 775
            +  RFL  VK+G W   GWP+VWTDY+VSKLALNAY++++A+R    G  +SVNC+CPG
Sbjct: 185 GMASRFLAQVKDGTWRGQGWPKVWTDYSVSKLALNAYARVLARRLQARGDRVSVNCFCPG 244

Query: 776 FTRTSMTRGQGKHTPDYVADVGARLVLLPPHELPTGKFY 892
           FTRT MTRG GK T +  A++GARL LLPP ELPTG F+
Sbjct: 245 FTRTDMTRGWGKRTAEEAAEIGARLALLPPGELPTGTFF 283


Top