BLASTX nr result

ID: Coptis23_contig00012436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012436
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274450.2| PREDICTED: NAC domain-containing protein 78-...   229   6e-58
gb|AAM34765.1|AF509865_1 nam-like protein 2 [Petunia x hybrida]       229   6e-58
gb|ABR18034.1| unknown [Picea sitchensis]                             228   8e-58
gb|AFW81879.1| putative NAC domain transcription factor superfam...   227   2e-57
gb|AAF68626.1|AF254124_1 NAC1 [Medicago truncatula]                   226   3e-57

>ref|XP_002274450.2| PREDICTED: NAC domain-containing protein 78-like [Vitis vinifera]
          Length = 282

 Score =  229 bits (583), Expect = 6e-58
 Identities = 107/183 (58%), Positives = 133/183 (72%)
 Frame = -3

Query: 751 QAIIELDLYKFSPWDLPGKSCMRSGDREWFFFCPRDRKYANGPRLNRASAVGYWKTTGRD 572
           + I ELD+YKF P DLP KSC++S DREW+FFCPR RKYA+G R+NR +  GYWKTTG+D
Sbjct: 36  EVISELDIYKFVPQDLPDKSCLKSRDREWYFFCPRARKYASGGRMNRTTESGYWKTTGKD 95

Query: 571 RAICNDSQTVGMKRTLIFHLGRAPKGDRTNWVMHEYRLEIKDLADTGIQQDSYVLCKIFE 392
           R +  +++TVG  RTLIFH GRAPKGDRT+WVMHEYRLE K L D GI QD++VLCKIF+
Sbjct: 96  RQVVYENRTVGQIRTLIFHQGRAPKGDRTDWVMHEYRLEDKVLVDRGIVQDAFVLCKIFQ 155

Query: 391 KSGAGPRNGEQYGAPFREEEWEDDVVDNSLAPLPLIRSGSPSTVLDNEKSTVTENSSVIP 212
           KSG GP+NG QYGAPF EEEW  +   + +  LP      P+ VL++ +S      +V P
Sbjct: 156 KSGPGPKNGAQYGAPFNEEEWNSEDEADHIESLPFSSIDVPAMVLNDNQSNSILRDTVGP 215

Query: 211 AKT 203
             T
Sbjct: 216 EDT 218


>gb|AAM34765.1|AF509865_1 nam-like protein 2 [Petunia x hybrida]
          Length = 487

 Score =  229 bits (583), Expect = 6e-58
 Identities = 112/233 (48%), Positives = 149/233 (63%), Gaps = 2/233 (0%)
 Frame = -3

Query: 760 LHVQAIIELDLYKFSPWDLPGKSCMRSGDREWFFFCPRDRKYANGPRLNRASAVGYWKTT 581
           LH  AI EL++YK SPWDLPGK C +S D EW+FFCPR+RKYA+G R+NRA+  GYWKTT
Sbjct: 31  LHFDAITELNIYKVSPWDLPGKCCYKSKDLEWYFFCPRERKYASGARMNRATETGYWKTT 90

Query: 580 GRDRAICNDSQTVGMKRTLIFHLGRAPKGDRTNWVMHEYRLEIKDLADTGIQQDSYVLCK 401
           G+DR++  D + VG  +TLIFH G  PKG RT+WV+HEYR E K LAD G  QD+YVLC+
Sbjct: 91  GKDRSVIYDEKVVGSVKTLIFHRGHPPKGQRTDWVIHEYRFEDKGLADAGFVQDAYVLCR 150

Query: 400 IFEKSGAGPRNGEQYGAPFREEEWEDDVVDNSLAPLPLIRSGSPSTVLDNEKSTVTENSS 221
           +F+K+G GP+NG QYGAPF+E++WEDD V  +  P  L    +P  + +N+  ++  +S 
Sbjct: 151 VFQKNGLGPKNGAQYGAPFKEDDWEDDEVP-AAEPFTLDVFSAPPGLPENQSYSIV-SSL 208

Query: 220 VIPAKTR--EPLAPLAPVDSGSPSTALDNEKITVTENTNVIPGKTCGPLDPLE 68
           V P  T       P  P     PS   D  ++    N + +      P D L+
Sbjct: 209 VDPGSTSGWHSGEPSQPSIQRIPSDERDPGELPAEPNPSNVSSMNWMPSDKLD 261


>gb|ABR18034.1| unknown [Picea sitchensis]
          Length = 660

 Score =  228 bits (582), Expect = 8e-58
 Identities = 112/202 (55%), Positives = 144/202 (71%), Gaps = 3/202 (1%)
 Frame = -3

Query: 748 AIIELDLYKFSPWDLPGKSCMRSGDREWFFFCPRDRKYANGPRLNRASAVGYWKTTGRDR 569
           AI E+DLYKF P DLPGKSC++S D EW+FF P+DRKY NG R NR++  GYWKTTG+DR
Sbjct: 37  AISEIDLYKFEPRDLPGKSCLQSRDLEWYFFNPKDRKYPNGSRTNRSTKDGYWKTTGKDR 96

Query: 568 AICNDSQTVGMKRTLIFHLGRAPKGDRTNWVMHEYRLEIKDLADTGIQQDSYVLCKIFEK 389
            +C+ SQTVGMK+TL++H GRAP+G+RTNWVMHEYRLE KDL  +   QDSYVLC++F+K
Sbjct: 97  PVCSASQTVGMKKTLVYHTGRAPRGERTNWVMHEYRLEGKDLKMSNPAQDSYVLCRVFQK 156

Query: 388 SGAGPRNGEQYGAPFREEEWEDDVVDNSLAPLPLIRSGSPSTVLDNEKSTVTENSSVIPA 209
           SG GP+NGEQYGAPFREE+W  D+   +      I S     V  N+ ST+++   +I  
Sbjct: 157 SGPGPKNGEQYGAPFREEDWNADIFSKA----EEISSVEMDHVATND-STLSKTEEIIAH 211

Query: 208 KTREPLAP---LAPVDSGSPST 152
               P      ++PV+  +PST
Sbjct: 212 CGGVPALDNVIVSPVEELAPST 233


>gb|AFW81879.1| putative NAC domain transcription factor superfamily protein
           isoform 1 [Zea mays] gi|413949231|gb|AFW81880.1|
           putative NAC domain transcription factor superfamily
           protein isoform 2 [Zea mays]
          Length = 445

 Score =  227 bits (579), Expect = 2e-57
 Identities = 114/205 (55%), Positives = 138/205 (67%), Gaps = 17/205 (8%)
 Frame = -3

Query: 754 VQAIIELDLYKFSPWDLPGKSCMRSGDREWFFFCPRDRKYANGPRLNRASAVGYWKTTGR 575
           V AI E+DLYKF PWDL  KS +RS D EWFFFCPRD+KY NG R NRA+  GYWKT+G+
Sbjct: 35  VDAIAEVDLYKFPPWDLCDKSSLRSKDLEWFFFCPRDKKYPNGSRTNRATPNGYWKTSGK 94

Query: 574 DRAICNDSQTVGMKRTLIFHLGRAPKGDRTNWVMHEYRLEIKDLADTGIQQDSYVLCKIF 395
           DR I  +S+TVGMK+TLIFH G+APKGDRT+WVM+EYR+E +DL   G  +D+YVLCKIF
Sbjct: 95  DRIIMLNSRTVGMKKTLIFHEGKAPKGDRTDWVMYEYRMEDEDLVSAGFSKDAYVLCKIF 154

Query: 394 EKSGAGPRNGEQYGAPFREEEWEDDVVDNSLAPL--------------PLIRSGS---PS 266
           +KSG GPR GEQYGAPF E+EW++  V+ SL PL              P + +G+   P 
Sbjct: 155 KKSGLGPRIGEQYGAPFNEDEWDNAEVETSLFPLTCSEVNPTEGQRAQPTVLAGALLEPE 214

Query: 265 TVLDNEKSTVTENSSVIPAKTREPL 191
             L N  ST     S     T E L
Sbjct: 215 PPLHNSSSTCAGEESSFGHATAEDL 239


>gb|AAF68626.1|AF254124_1 NAC1 [Medicago truncatula]
          Length = 409

 Score =  226 bits (577), Expect = 3e-57
 Identities = 108/204 (52%), Positives = 141/204 (69%), Gaps = 4/204 (1%)
 Frame = -3

Query: 745 IIELDLYKFSPWDLPGKSCMRSGDREWFFFCPRDRKYANGPRLNRASAVGYWKTTGRDRA 566
           I ELD+YK++PWDLP  S +++GD EW+FFCP ++KY NG R+NRA+ +G+WK TG+DRA
Sbjct: 38  IAELDIYKYAPWDLPDLSYLQNGDLEWYFFCPIEKKYGNGSRMNRATEIGFWKATGKDRA 97

Query: 565 ICNDSQTVGMKRTLIFHLGRAPKGDRTNWVMHEYRLEIKDLADTGIQQDSYVLCKIFEKS 386
           +  ++QTVGM +TLIFH G+AP+GDRT+WVMHEYRLE KDLAD GI QDSYV+CK+F+K 
Sbjct: 98  VQQNNQTVGMIKTLIFHTGKAPRGDRTDWVMHEYRLEDKDLADKGIVQDSYVICKVFQKE 157

Query: 385 GAGPRNGEQYGAPFREEEWEDDVVDNSLAP----LPLIRSGSPSTVLDNEKSTVTENSSV 218
           G GPRNG QYG PF EE+W DD V    A      P +   S S VL+++       +  
Sbjct: 158 GPGPRNGAQYGRPFNEEDWSDDEVGTPFAEPAALAPTLPVTSNSFVLNDQNLHAIGYNGS 217

Query: 217 IPAKTREPLAPLAPVDSGSPSTAL 146
           I    +  L P +P  + S  T L
Sbjct: 218 ISMPCQSGLVP-SPDPANSCQTGL 240


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