BLASTX nr result
ID: Coptis23_contig00012435
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00012435 (554 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-21 gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides] 85 2e-20 ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2... 99 5e-19 ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 77 1e-18 emb|CBI23595.3| unnamed protein product [Vitis vinifera] 77 1e-18 >ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|222864751|gb|EEF01882.1| predicted protein [Populus trichocarpa] Length = 374 Score = 107 bits (268), Expect = 1e-21 Identities = 70/166 (42%), Positives = 73/166 (43%) Frame = -3 Query: 504 REMDCVIGHVLFGHYYPACPQPELTMGTTKHSDPDFLTILLQDQWXXXXXXXXXXXSTCP 325 +EMDCV GH L HYYPACP+PEL MGTTKHSDPDFLTILLQD P Sbjct: 213 KEMDCVKGHALLSHYYPACPEPELAMGTTKHSDPDFLTILLQDDIGGLQIFHQNHWIDVP 272 Query: 324 WXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIGDLLQARP*HIELL*VRAFP 145 NIGDLLQA Sbjct: 273 ------------------------------PVHGALVVNIGDLLQA-------------- 288 Query: 144 XXXXXXXXXXXXXXXXXISNDKFFSVEHRVLANHIGPRVSAACFFT 7 ISNDKF SVEHRV+ANHIGPRVS A FFT Sbjct: 289 -------------STVLISNDKFKSVEHRVVANHIGPRVSVASFFT 321 >gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides] Length = 370 Score = 84.7 bits (208), Expect(2) = 2e-20 Identities = 36/43 (83%), Positives = 38/43 (88%) Frame = -3 Query: 504 REMDCVIGHVLFGHYYPACPQPELTMGTTKHSDPDFLTILLQD 376 +EMDCV GH L HYYPACP+PEL MGTTKHSDPDFLTILLQD Sbjct: 213 KEMDCVKGHALLSHYYPACPEPELAMGTTKHSDPDFLTILLQD 255 Score = 39.7 bits (91), Expect(2) = 2e-20 Identities = 18/24 (75%), Positives = 20/24 (83%), Gaps = 1/24 (4%) Frame = -1 Query: 377 ISGLQV-HQNQWIDIPPVPGALVV 309 I GLQ+ HQN WID+PPV GALVV Sbjct: 257 IGGLQIFHQNHWIDVPPVHGALVV 280 >ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1| predicted protein [Populus trichocarpa] Length = 379 Score = 99.0 bits (245), Expect = 5e-19 Identities = 63/165 (38%), Positives = 73/165 (44%) Frame = -3 Query: 501 EMDCVIGHVLFGHYYPACPQPELTMGTTKHSDPDFLTILLQDQWXXXXXXXXXXXSTCPW 322 +MDC G L HYYPACP+PELT+GT+KHSD DFLT+LLQDQ P Sbjct: 216 KMDCAEGLALISHYYPACPEPELTLGTSKHSDNDFLTVLLQDQIGGLQMLHQDQWVDIP- 274 Query: 321 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIGDLLQARP*HIELL*VRAFPX 142 NIGDL+QA I L+ Sbjct: 275 -----------------------------PVPGALVINIGDLMQASFSFISLI------- 298 Query: 141 XXXXXXXXXXXXXXXXISNDKFFSVEHRVLANHIGPRVSAACFFT 7 SNDKF SVEHRVLAN +GPR+S ACFF+ Sbjct: 299 -----------------SNDKFKSVEHRVLANRVGPRISVACFFS 326 >ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] Length = 363 Score = 77.4 bits (189), Expect(2) = 1e-18 Identities = 34/44 (77%), Positives = 37/44 (84%) Frame = -3 Query: 504 REMDCVIGHVLFGHYYPACPQPELTMGTTKHSDPDFLTILLQDQ 373 ++MDC G + HYYPACPQPELTMGTTKHSD DFLTILLQDQ Sbjct: 206 KDMDCAEGLAILCHYYPACPQPELTMGTTKHSDNDFLTILLQDQ 249 Score = 40.8 bits (94), Expect(2) = 1e-18 Identities = 17/25 (68%), Positives = 22/25 (88%), Gaps = 1/25 (4%) Frame = -1 Query: 380 KISGLQV-HQNQWIDIPPVPGALVV 309 +I GLQV HQ+QW+D+PP PGALV+ Sbjct: 249 QIGGLQVLHQDQWVDVPPEPGALVI 273 >emb|CBI23595.3| unnamed protein product [Vitis vinifera] Length = 206 Score = 77.4 bits (189), Expect(2) = 1e-18 Identities = 34/44 (77%), Positives = 37/44 (84%) Frame = -3 Query: 504 REMDCVIGHVLFGHYYPACPQPELTMGTTKHSDPDFLTILLQDQ 373 ++MDC G + HYYPACPQPELTMGTTKHSD DFLTILLQDQ Sbjct: 49 KDMDCAEGLAILCHYYPACPQPELTMGTTKHSDNDFLTILLQDQ 92 Score = 40.8 bits (94), Expect(2) = 1e-18 Identities = 17/25 (68%), Positives = 22/25 (88%), Gaps = 1/25 (4%) Frame = -1 Query: 380 KISGLQV-HQNQWIDIPPVPGALVV 309 +I GLQV HQ+QW+D+PP PGALV+ Sbjct: 92 QIGGLQVLHQDQWVDVPPEPGALVI 116