BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012417
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268514.1| PREDICTED: uncharacterized protein LOC100245...   170   5e-40
ref|XP_002278038.2| PREDICTED: uncharacterized protein LOC100244...   160   4e-37
emb|CAN74734.1| hypothetical protein VITISV_044234 [Vitis vinifera]   160   6e-37
ref|XP_002512799.1| pentatricopeptide repeat-containing protein,...   154   4e-35
ref|XP_002297893.1| predicted protein [Populus trichocarpa] gi|2...   153   8e-35

>ref|XP_002268514.1| PREDICTED: uncharacterized protein LOC100245456 [Vitis vinifera]
          Length = 292

 Score =  170 bits (431), Expect = 5e-40
 Identities = 102/264 (38%), Positives = 139/264 (52%), Gaps = 29/264 (10%)
 Frame = -1

Query: 807 SMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKDTSKTQTPPQ---RHKTPIDREGKEN 637
           SME+KV+ CK +KAFNFFQKL +Y+ VSI+S     S  +   Q   R KTP+DR+G  N
Sbjct: 6   SMELKVISCKHLKAFNFFQKLVVYAVVSIISDESKNSNQKHQIQCLQRQKTPVDRDGNGN 65

Query: 636 PEWNHLIQLDLSALHLDNQHDLFLEFDMLCDSAIFGDKSIGQVRVPIKELIEECNGTVRF 457
           PEWNH +Q DL  + L +  + +++F + C+  +FG+K+IG+V VP+KELI+E N  VRF
Sbjct: 66  PEWNHQLQFDLRDISLADSANYYVKFSLRCEGIVFGNKTIGEVCVPLKELIDEFNRAVRF 125

Query: 456 VSYQVMTTDGKPNGVLDFSYK-----------------------VIDDQFN--KIGSLYP 352
           VSYQV TTDGKPNGVL+FSYK                       V  ++F+  K  S YP
Sbjct: 126 VSYQVRTTDGKPNGVLNFSYKLNIKGSDLPAVEAPEDEHLPYPSVEVEEFHAPKKDSCYP 185

Query: 351 EIESIAFHQXXXXXXXXXXXXXXXXXXPCVFYPQPLP-ETPHFVQAEFYYPPPAPLVYGA 175
            ++                             P P P   P  +   +Y+P P PLVY +
Sbjct: 186 SVDVSTLPAISISTPYHTPEFHNMGPPQLPLPPPPPPAAVPMMMAGAYYHPLPCPLVYAS 245

Query: 174 PTGPYGYPVGNYSYPVCGYPTNDG 103
              PY      Y + +C YP+  G
Sbjct: 246 Q--PY------YDHGLCRYPSAAG 261


>ref|XP_002278038.2| PREDICTED: uncharacterized protein LOC100244618 [Vitis vinifera]
          Length = 1154

 Score =  160 bits (406), Expect = 4e-37
 Identities = 104/279 (37%), Positives = 144/279 (51%), Gaps = 32/279 (11%)
 Frame = -1

Query: 861  ILTFTSQQERNSTIMAPTSMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKDTSKTQTP 682
            +L+  S   RNS       ++VKVM CKD++AFNFFQKLS+Y+ VS+VS   D       
Sbjct: 876  LLSMESNTSRNS-------IQVKVMSCKDLRAFNFFQKLSVYAIVSLVSDDPDQKLEPHH 928

Query: 681  PQRHKTPIDREGKENPEWNHLIQLDLSALHLDNQHDLFLEFDMLCDSAIF--GDKSIGQV 508
             Q+ +TP D+EG  NPEWNHL++ +L  +     H LF+ FD+ C+  +F  GDK++G+V
Sbjct: 929  QQQQRTPADKEGDGNPEWNHLMEFNL--IEGFGLHHLFIHFDLRCEGLVFGIGDKALGEV 986

Query: 507  RVPIKELIE-ECNGTVRFVSYQVMTTDGKPNGVLDFSYKVIDDQFNK---IG-------- 364
            RVP+ +LI+ + NG +RFVSYQV + DGKPNGVL+FSYK + ++  K   +G        
Sbjct: 987  RVPLDDLIQPDSNGIMRFVSYQVRSGDGKPNGVLNFSYKAVMNEMGKKEEMGCSSPSPAN 1046

Query: 363  ----------------SLYP--EIESIAFHQXXXXXXXXXXXXXXXXXXPCVFYPQPLPE 238
                            +LYP  E+E  +                        +YP P P 
Sbjct: 1047 EITGFPIRHQPTTPPPTLYPTLELEIPSPSTPQQIQYTSPGTGSMQHPPHQPYYPPPPPP 1106

Query: 237  TPHFVQAEFYYPPPAPLVYGAPTGPYGYPVGNYSYPVCG 121
             P       YYPPP PL    P  P   P+  Y +P  G
Sbjct: 1107 PPG------YYPPPPPLHPPPPLFPPPPPLPYYQHPPHG 1139


>emb|CAN74734.1| hypothetical protein VITISV_044234 [Vitis vinifera]
          Length = 276

 Score =  160 bits (404), Expect = 6e-37
 Identities = 101/261 (38%), Positives = 139/261 (53%), Gaps = 32/261 (12%)
 Frame = -1

Query: 807 SMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKDTSKTQTPPQRHKTPIDREGKENPEW 628
           S++VKVM CKD++AFNFFQKLS+Y+ VS+VS   D        Q+ +TP D+EG  NPEW
Sbjct: 9   SIQVKVMSCKDLRAFNFFQKLSVYAIVSLVSDDPDQKLEPHHQQQQRTPADKEGDGNPEW 68

Query: 627 NHLIQLDLSALHLDNQHDLFLEFDMLCDSAIF--GDKSIGQVRVPIKELIE-ECNGTVRF 457
           NHL++ +L  +     H LF+ FD+ C+  +F  GDK++G+VRVP+ +LI+ + NG +RF
Sbjct: 69  NHLMEFNL--IEGFGLHHLFIHFDLRCEGLVFGIGDKALGEVRVPLDDLIQPDSNGIMRF 126

Query: 456 VSYQVMTTDGKPNGVLDFSYKVIDDQFNK---IG------------------------SL 358
           VSYQV + DGKPNGVL+FSYK + ++  K   +G                        +L
Sbjct: 127 VSYQVRSGDGKPNGVLNFSYKAVMNEMGKKEEMGCSSPSPANEITGFPIRHQPTTPPPTL 186

Query: 357 YP--EIESIAFHQXXXXXXXXXXXXXXXXXXPCVFYPQPLPETPHFVQAEFYYPPPAPLV 184
           YP  E+E  +                        +YP P P  P       YYPPP PL 
Sbjct: 187 YPTLELEIPSPSTPQQXQYTSPGTGSMQHPPHQPYYPPPPPPPPG------YYPPPPPLH 240

Query: 183 YGAPTGPYGYPVGNYSYPVCG 121
              P  P   P+  Y +P  G
Sbjct: 241 PPPPLFPPPPPLPYYQHPPHG 261


>ref|XP_002512799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547810|gb|EEF49302.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1198

 Score =  154 bits (389), Expect = 4e-35
 Identities = 97/240 (40%), Positives = 129/240 (53%), Gaps = 13/240 (5%)
 Frame = -1

Query: 834  RNSTIMAPTSMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKDTSKTQTPPQRHKTPID 655
            +N   M    ME+KVM C D+KAFNFFQKL +Y  VS+VS  +D  K     Q+ +TP D
Sbjct: 886  QNQLPMESKFMELKVMYCNDLKAFNFFQKLLVYVLVSLVS--EDPDKKLKRNQQQRTPTD 943

Query: 654  REGKENPEWNHLIQLDLSALHLDNQHDLFLEFDMLCDSAIFGDKSIGQVRVPIKELIEEC 475
             E   NP WNH ++ DLS +   +   LFL FD+L +   FG+K+IG VRVP+K+LI+E 
Sbjct: 944  TEDDGNPAWNHEMRFDLSEVSFVDCDHLFLHFDLLHEGLYFGNKTIGDVRVPLKDLIQES 1003

Query: 474  NGTVRFVSYQVMTTDGKPNGVLDFSYKVIDDQFNKIGSLYPEIE----SIAFHQXXXXXX 307
            +G  RFV+YQV + +GKPNG+L+FSYKV + Q   +G  +P  E    S+  H       
Sbjct: 1004 SGITRFVNYQVRSPEGKPNGILNFSYKV-NAQGKDMGIHFPTSEITGYSVVVHH---HHE 1059

Query: 306  XXXXXXXXXXXXPCVFYPQPLPETPHFVQAEFYYPPPAPLVYGA---------PTGPYGY 154
                        P V YP P PE      ++  YPP A + Y           P  PY Y
Sbjct: 1060 SSDIQNPAESSSPVVHYPPPKPED----SSQETYPPAAEVSYPIQGTQQQSPYPPTPYAY 1115


>ref|XP_002297893.1| predicted protein [Populus trichocarpa] gi|222845151|gb|EEE82698.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  153 bits (386), Expect = 8e-35
 Identities = 89/210 (42%), Positives = 124/210 (59%), Gaps = 41/210 (19%)
 Frame = -1

Query: 849 TSQQERNSTIMAPTSMEVKVMCCKDIKAFNFFQKLSIYSSVSIVS--TRKDTSKTQ---- 688
           +S +++    M   S+E+KV+ C+D+KAFNFFQKLS+Y  VS+ +   RK+  + Q    
Sbjct: 17  SSVEKKAEHTMEGVSLELKVISCRDLKAFNFFQKLSVYVVVSVFNDEPRKNEQQRQKTAV 76

Query: 687 ---------------------TP-------------PQRHKTPIDREGKENPEWNHLIQL 610
                                TP              QR KTP DREG  NPEWNH+++ 
Sbjct: 77  DFLSCVLKKNEKQRQRLQGQKTPLNDEAQKNEQQQLLQRQKTPADREGGSNPEWNHMMEF 136

Query: 609 DLSALHLDNQHD-LFLEFDMLCDSAIFGDKSIGQVRVPIKELIEECNGTVRFVSYQVMTT 433
           DL+   L    D LF +F++ C+ AIFG+KSIG+V VP K+LIEE NG+VRFVSYQV  +
Sbjct: 137 DLNTTSLPGHGDHLFFKFELRCEGAIFGNKSIGEVCVPFKDLIEEFNGSVRFVSYQVRNS 196

Query: 432 DGKPNGVLDFSYKVIDDQFNKIGSLYPEIE 343
           DGKPNGVL+ SY+V +++  K G   P+++
Sbjct: 197 DGKPNGVLNLSYEV-NEKVQKEGIESPKVD 225