BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012412
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ...   166   4e-39
ref|XP_002530529.1| RNA binding protein, putative [Ricinus commu...   157   1e-36
ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycin...   150   2e-34
ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein ...   145   7e-33

>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
           protein product [Vitis vinifera]
          Length = 133

 Score =  166 bits (419), Expect = 4e-39
 Identities = 86/123 (69%), Positives = 97/123 (78%)
 Frame = -2

Query: 513 RNIRTADPLNSAPRPAHHLISCRGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIIS 334
           RN+    P  S   P   LI CRG+ASKLFVGGLSFYTTE+ LSE FSQ+GQV+EAKI+ 
Sbjct: 10  RNLTNLSP--SFLLPPALLICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVM 67

Query: 333 DRVSDRSKGFGFITFASEDEAQKAREEMNGKVLNGRVIYVDTAKPSRTGYSNDMPIARGP 154
           DRVSDRSKGFGF+TFASE+EAQKAR EM+GK LNGR I+VD AKP R  +   MPIARGP
Sbjct: 68  DRVSDRSKGFGFVTFASEEEAQKARTEMDGKELNGRTIFVDYAKP-RADFGGGMPIARGP 126

Query: 153 PEP 145
           PEP
Sbjct: 127 PEP 129


>ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
           gi|223529933|gb|EEF31861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 127

 Score =  157 bits (398), Expect = 1e-36
 Identities = 77/104 (74%), Positives = 90/104 (86%)
 Frame = -2

Query: 456 ISCRGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFITFASED 277
           +S RG+A+KLFVGGLSFYTT++ L+E+FSQ+GQV+EA I+SDRV DRSKGFGF+TFASED
Sbjct: 24  VSYRGIATKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASED 83

Query: 276 EAQKAREEMNGKVLNGRVIYVDTAKPSRTGYSNDMPIARGPPEP 145
           EA  A  EMNGK LNGRVIYVD AKP RT   N++PIARGPPEP
Sbjct: 84  EAHNALSEMNGKTLNGRVIYVDYAKP-RTDSRNEVPIARGPPEP 126


>ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|222855388|gb|EEE92935.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score =  150 bits (380), Expect = 1e-34
 Identities = 73/101 (72%), Positives = 85/101 (84%)
 Frame = -2

Query: 447 RGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFITFASEDEAQ 268
           RG+ +KLFVGGLS YTTE  LSE+FSQ+GQV+EAKI+ DR  DRSKGFGF+T+ASEDEAQ
Sbjct: 35  RGITTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQ 94

Query: 267 KAREEMNGKVLNGRVIYVDTAKPSRTGYSNDMPIARGPPEP 145
           KA +EMNGK LNGRVIYVD AK  +T +   +PIARGPPEP
Sbjct: 95  KALDEMNGKALNGRVIYVDYAK-LKTNFGGGIPIARGPPEP 134


>ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
           gi|255631508|gb|ACU16121.1| unknown [Glycine max]
          Length = 130

 Score =  150 bits (379), Expect = 2e-34
 Identities = 74/101 (73%), Positives = 87/101 (86%)
 Frame = -2

Query: 447 RGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFITFASEDEAQ 268
           RG+A KLFVGGLSFYTTE ALSE+FS +GQVIEAKI++DRVSDRSKGFGF+TFAS+DEA+
Sbjct: 25  RGIAYKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAE 84

Query: 267 KAREEMNGKVLNGRVIYVDTAKPSRTGYSNDMPIARGPPEP 145
            A E+M GK LNGRVI+VD AKP+      ++PIARGPPEP
Sbjct: 85  NAIEDMKGKTLNGRVIFVDYAKPN-INTRGEIPIARGPPEP 124


>ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 134

 Score =  145 bits (365), Expect = 7e-33
 Identities = 72/108 (66%), Positives = 88/108 (81%)
 Frame = -2

Query: 471 PAHHLISCRGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFIT 292
           P   L+S RG+A+KLFVGGLS+YTT++ LSE+FSQ+GQVIEA ++ DRVSD+SKGFGF+T
Sbjct: 23  PPSRLVSYRGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVT 82

Query: 291 FASEDEAQKAREEMNGKVLNGRVIYVDTAKPSRTGYSNDMPIARGPPE 148
           FAS DEA  A  EMNGK LNGRVI+V+ AKP+ T     +PIARGPPE
Sbjct: 83  FASLDEAHTALSEMNGKPLNGRVIFVNYAKPT-TSSRGAIPIARGPPE 129