BLASTX nr result

ID: Coptis23_contig00012410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012410
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533839.1| conserved hypothetical protein [Ricinus comm...   214   5e-54
emb|CBI17691.3| unnamed protein product [Vitis vinifera]              213   2e-53
ref|XP_002272273.1| PREDICTED: uncharacterized protein LOC100254...   213   2e-53
ref|XP_002328016.1| predicted protein [Populus trichocarpa] gi|2...   208   5e-52
ref|XP_002309779.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50

>ref|XP_002533839.1| conserved hypothetical protein [Ricinus communis]
           gi|223526218|gb|EEF28541.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 523

 Score =  214 bits (546), Expect = 5e-54
 Identities = 105/180 (58%), Positives = 139/180 (77%), Gaps = 1/180 (0%)
 Frame = -3

Query: 540 YLWPIIVAVSITFLAXXXXXXXXXGTTRFYSRAKTVMNIIIDTADEASNTIYNVTGAMRD 361
           YLWPI++A+  T L          G  +F SRA+TV+NIIIDTAD AS TIYN TGAM++
Sbjct: 130 YLWPILLAIIFTVLTLTASGLVLGGNQKFRSRARTVVNIIIDTADGASGTIYNTTGAMKE 189

Query: 360 IRDSI-ATSKRGNKTAKFLTSTSQRLDKDAAVLNTEAKKNRRLIDKGLKIVYITTTVAIT 184
           IRD++ A++    + + FLTST+Q+LD  A  ++ EA+K+RRLI+KGLKIVYI TTV I+
Sbjct: 190 IRDNLEASNASAGEASSFLTSTAQQLDNQADEIHREARKHRRLIEKGLKIVYIITTVTIS 249

Query: 183 LNLVAVIALSVCGVLKLRKAFYMFIILCWLMAALCWVFFGLYFSLEKFTGDTCTALQDFQ 4
           LNLVA+ ALSVCG L+LR+A  + I+LCW++ ALCW+FFG+YF L KF+GDTCTAL++FQ
Sbjct: 250 LNLVAITALSVCGTLRLRRALNLLIVLCWILTALCWLFFGVYFFLGKFSGDTCTALENFQ 309


>emb|CBI17691.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  213 bits (541), Expect = 2e-53
 Identities = 105/180 (58%), Positives = 135/180 (75%)
 Frame = -3

Query: 540 YLWPIIVAVSITFLAXXXXXXXXXGTTRFYSRAKTVMNIIIDTADEASNTIYNVTGAMRD 361
           YLW I++A   T LA         G  +F+SRA+TV++II++TA++AS TIYN TGAMR+
Sbjct: 129 YLWHILLASFFTILAIVASGLVLGGNAKFHSRARTVVDIIMETANKASGTIYNTTGAMRN 188

Query: 360 IRDSIATSKRGNKTAKFLTSTSQRLDKDAAVLNTEAKKNRRLIDKGLKIVYITTTVAITL 181
           IR ++ T+  G + + FLTSTS +LD +AA +  +A+KNRRLIDKGLKIVYI TTV I+L
Sbjct: 189 IRQNLETTDVGAEASNFLTSTSDKLDVEAAGIERQARKNRRLIDKGLKIVYIITTVTISL 248

Query: 180 NLVAVIALSVCGVLKLRKAFYMFIILCWLMAALCWVFFGLYFSLEKFTGDTCTALQDFQQ 1
           NLVAVIALSV G LK R+A Y  I+ CW +  LCW+FFG+YF LE F+ DTCTAL+DFQQ
Sbjct: 249 NLVAVIALSVSGFLKFRRALYWLIVFCWFLTFLCWLFFGIYFFLENFSSDTCTALEDFQQ 308


>ref|XP_002272273.1| PREDICTED: uncharacterized protein LOC100254306 [Vitis vinifera]
          Length = 647

 Score =  213 bits (541), Expect = 2e-53
 Identities = 105/180 (58%), Positives = 135/180 (75%)
 Frame = -3

Query: 540 YLWPIIVAVSITFLAXXXXXXXXXGTTRFYSRAKTVMNIIIDTADEASNTIYNVTGAMRD 361
           YLW I++A   T LA         G  +F+SRA+TV++II++TA++AS TIYN TGAMR+
Sbjct: 245 YLWHILLASFFTILAIVASGLVLGGNAKFHSRARTVVDIIMETANKASGTIYNTTGAMRN 304

Query: 360 IRDSIATSKRGNKTAKFLTSTSQRLDKDAAVLNTEAKKNRRLIDKGLKIVYITTTVAITL 181
           IR ++ T+  G + + FLTSTS +LD +AA +  +A+KNRRLIDKGLKIVYI TTV I+L
Sbjct: 305 IRQNLETTDVGAEASNFLTSTSDKLDVEAAGIERQARKNRRLIDKGLKIVYIITTVTISL 364

Query: 180 NLVAVIALSVCGVLKLRKAFYMFIILCWLMAALCWVFFGLYFSLEKFTGDTCTALQDFQQ 1
           NLVAVIALSV G LK R+A Y  I+ CW +  LCW+FFG+YF LE F+ DTCTAL+DFQQ
Sbjct: 365 NLVAVIALSVSGFLKFRRALYWLIVFCWFLTFLCWLFFGIYFFLENFSSDTCTALEDFQQ 424


>ref|XP_002328016.1| predicted protein [Populus trichocarpa] gi|222837425|gb|EEE75804.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  208 bits (529), Expect = 5e-52
 Identities = 100/182 (54%), Positives = 137/182 (75%), Gaps = 2/182 (1%)
 Frame = -3

Query: 540 YLWPIIVAVSITFLAXXXXXXXXXGTTRFYSRAKTVMNIIIDTADEASNTIYNVTGAMRD 361
           YLWPI++A+  T LA         G  +F+SRAKTV++IIIDTA+ A+ T+YN TGAM+D
Sbjct: 155 YLWPILLAIFFTILAITASGLVLGGNAKFHSRAKTVVDIIIDTANNATKTMYNTTGAMKD 214

Query: 360 IRDSIATSKRGN--KTAKFLTSTSQRLDKDAAVLNTEAKKNRRLIDKGLKIVYITTTVAI 187
           +++S+  S +    + + FLTSTS++LD +AA +  +A+KNRRLIDKGLKIVYI TTV I
Sbjct: 215 MKESLGASNQSAAVQASSFLTSTSEQLDVEAADIQRQARKNRRLIDKGLKIVYIVTTVTI 274

Query: 186 TLNLVAVIALSVCGVLKLRKAFYMFIILCWLMAALCWVFFGLYFSLEKFTGDTCTALQDF 7
           +LNL A+IALSVCG L+LR+   + I +CW++  LCW+FFGLYF L+ F+ D+CTAL+ F
Sbjct: 275 SLNLAALIALSVCGTLRLRRPLNILIAVCWILTVLCWIFFGLYFFLQNFSRDSCTALESF 334

Query: 6   QQ 1
           QQ
Sbjct: 335 QQ 336


>ref|XP_002309779.1| predicted protein [Populus trichocarpa] gi|222852682|gb|EEE90229.1|
           predicted protein [Populus trichocarpa]
          Length = 558

 Score =  203 bits (517), Expect = 1e-50
 Identities = 97/182 (53%), Positives = 135/182 (74%), Gaps = 2/182 (1%)
 Frame = -3

Query: 540 YLWPIIVAVSITFLAXXXXXXXXXGTTRFYSRAKTVMNIIIDTADEASNTIYNVTGAMRD 361
           YLWPI++A+  T LA         G  +F+SRAK V++IIIDTA++A  T+YN TG M+D
Sbjct: 160 YLWPILLAIFFTILAITASGLVLGGNAKFHSRAKNVVDIIIDTANDAWKTMYNTTGVMKD 219

Query: 360 IRDSIATSKR--GNKTAKFLTSTSQRLDKDAAVLNTEAKKNRRLIDKGLKIVYITTTVAI 187
           +++++  SK+    + + FLT+TS +LD +AA +   A+KNR LIDKGLKIVYI TTV I
Sbjct: 220 MKENLGVSKQRAAAQASTFLTTTSAKLDAEAADIQRRARKNRHLIDKGLKIVYIVTTVTI 279

Query: 186 TLNLVAVIALSVCGVLKLRKAFYMFIILCWLMAALCWVFFGLYFSLEKFTGDTCTALQDF 7
           +LNL A+IALSVCG L+LR+  Y+ I++CW++  LCW+FFGLYF LE F+ D+C AL++F
Sbjct: 280 SLNLAALIALSVCGTLRLRRPLYILIVVCWILTVLCWLFFGLYFFLENFSRDSCAALKNF 339

Query: 6   QQ 1
           QQ
Sbjct: 340 QQ 341


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