BLASTX nr result

ID: Coptis23_contig00012406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012406
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002327346.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
 Frame = +1

Query: 112 LPFDPSPNSLLDCCNGMLLFFDRSSMQFYVCNPSTEQYIAIPNSPRRGGPPDGALFFD-- 285
           LPF+P+    LDCCNG+LLF +  ++Q+YVCNP+T+  +AIP           AL FD  
Sbjct: 114 LPFEPARGDFLDCCNGLLLFVEGCTLQYYVCNPATKHCVAIPRDFMLENIIFAALAFDPS 173

Query: 286 --PHFKIV 303
             PH+++V
Sbjct: 174 TSPHYRVV 181


>ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|222850806|gb|EEE88353.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = +1

Query: 112 LPFDPSPNSLLDCCNGMLLFFDRSSMQFYVCNPSTEQYIAIPNSPRRGGPPDGALFFD-- 285
           LPFD +    LDCCNG+LLF +    ++YVCNP T+Q +AIP           +L FD  
Sbjct: 109 LPFDLARGDFLDCCNGLLLFVEGPIPRYYVCNPVTKQCVAIPRDFTLENICTASLAFDPF 168

Query: 286 --PHFKIV 303
             PH+++V
Sbjct: 169 KSPHYRVV 176


>ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|222838455|gb|EEE76820.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = +1

Query: 112 LPFDPSPNSLLDCCNGMLLFFDRSSMQFYVCNPSTEQYIAIPNSPRRGGPPDGALFFD-- 285
           LPFD +    LDCCNG+LLF +    ++YVCNP T+Q +AIP           +L FD  
Sbjct: 114 LPFDLARGDFLDCCNGLLLFVEGPIPRYYVCNPVTKQCVAIPRDFTLENICTASLAFDPF 173

Query: 286 --PHFKIV 303
             PH+++V
Sbjct: 174 KSPHYRVV 181


>ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|222838910|gb|EEE77261.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
 Frame = +1

Query: 112 LPFDPSPNSLLDCCNGMLLFFDRSSMQ-----FYVCNPSTEQYIAIPNSPRRGGPPDGAL 276
           LPF  S +   DCCNG+LLF  R   +     ++VCN +T Q +AIPN   R  P   A+
Sbjct: 97  LPFMLSSDHYFDCCNGLLLFVRREQREDLPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAI 156

Query: 277 FFD----PHFKIV 303
            +D    PH+K+V
Sbjct: 157 AYDPAKSPHYKVV 169


>ref|XP_002327346.1| predicted protein [Populus trichocarpa] gi|222835716|gb|EEE74151.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
 Frame = +1

Query: 112 LPFDPSPNSLLDCCNGMLLFFDRSSMQ-----FYVCNPSTEQYIAIPNSPRRGGPPDGAL 276
           LPF  S +   DCCNG+LLF  R   +     ++VCN +T Q +AIPN   R  P   A+
Sbjct: 97  LPFMLSSDHYFDCCNGLLLFVRREQREALPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAI 156

Query: 277 FFD----PHFKIV 303
            +D    PH+K+V
Sbjct: 157 AYDPAKSPHYKVV 169


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