BLASTX nr result

ID: Coptis23_contig00012403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012403
         (1635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135099.1| PREDICTED: dihydrolipoyllysine-residue acety...   490   e-151
ref|XP_002282287.1| PREDICTED: dihydrolipoyllysine-residue acety...   487   e-150
ref|XP_002315946.1| predicted protein [Populus trichocarpa] gi|2...   474   e-147
ref|XP_002529121.1| Dihydrolipoyllysine-residue acetyltransferas...   475   e-146
ref|XP_003555893.1| PREDICTED: dihydrolipoyllysine-residue acety...   468   e-144

>ref|XP_004135099.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of
            pyruvate dehydrogenase complex-like [Cucumis sativus]
            gi|449523744|ref|XP_004168883.1| PREDICTED:
            dihydrolipoyllysine-residue acetyltransferase component
            of pyruvate dehydrogenase complex-like [Cucumis sativus]
          Length = 487

 Score =  490 bits (1261), Expect(2) = e-151
 Identities = 272/392 (69%), Positives = 287/392 (73%), Gaps = 16/392 (4%)
 Frame = -1

Query: 1410 KADMDVETFYDGILAAIVVGEGQTAPVGAPIGLLAETEAEIEEXXXXXXXXXXXXXXXXX 1231
            KADMDVETFYDGILAAIVVGEG+TAPVGAPIGLLAETE E+ E                 
Sbjct: 97   KADMDVETFYDGILAAIVVGEGETAPVGAPIGLLAETEEEVAEAKAKAASKSTSAPAAPA 156

Query: 1230 XXXXXXXXXXXXXXXXS--------NEPKKIVATPFAKKLAKQHKVDIKTVNGTGPFGRI 1075
                            +        + PKKIVATP AKKLAKQHKVDI +V GTGPFGRI
Sbjct: 157  AAVSPSPPPPSSSPAPAISQSSPPSDGPKKIVATPQAKKLAKQHKVDIGSVTGTGPFGRI 216

Query: 1074 TPEDVEAAAGITSKKTSSVINVXXXXXXXXXXXXXXXXP--------IPGATIVPFTTMQ 919
            TP DVEAAAGI   K + V NV                         +PG+T+VPFTTMQ
Sbjct: 217  TPADVEAAAGIAPSKPA-VSNVASPVAAEAAAVPSKASAAPSNLPPPVPGSTVVPFTTMQ 275

Query: 918  SAVSKNMIESLSVPAFRVGYPVMTDALDALYEKVKPKGVTMTXXXXXXXXXXXAQHPVVN 739
            +AVSKNM+ESLSVP FRVGYPV TDALDALYEKVKPKGVTMT           AQHPVVN
Sbjct: 276  AAVSKNMVESLSVPTFRVGYPVSTDALDALYEKVKPKGVTMTALLAKAAAMALAQHPVVN 335

Query: 738  ASCKDGKSFTYXXXXXXXXXXXXNGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQ 559
            ASCKDGKSFTY            NGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQ
Sbjct: 336  ASCKDGKSFTYNSNINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQ 395

Query: 558  PHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTGADGFFSVKSKMLVN 379
            PHEYNSGTFTLSNLGMFGVD+FDAILPPGQGAIMAVGASKPTVVT ADGFFSVKSKMLVN
Sbjct: 396  PHEYNSGTFTLSNLGMFGVDKFDAILPPGQGAIMAVGASKPTVVTDADGFFSVKSKMLVN 455

Query: 378  VTADHRIVYGADLASFLQTFAKIIQNPESLTL 283
            VTADHRIVYGADLA+FLQTFAKI++NPESLTL
Sbjct: 456  VTADHRIVYGADLAAFLQTFAKIVENPESLTL 487



 Score = 72.4 bits (176), Expect(2) = e-151
 Identities = 37/46 (80%), Positives = 39/46 (84%)
 Frame = -2

Query: 1625 IQAKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGXXXXXXXSDK 1488
            IQ+KIREIFMPALSSTMTEGKIVSW+KSEGDVLSKG       SDK
Sbjct: 52   IQSKIREIFMPALSSTMTEGKIVSWVKSEGDVLSKGESVVVVESDK 97


>ref|XP_002282287.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of
            pyruvate dehydrogenase complex, mitochondrial-like [Vitis
            vinifera]
          Length = 488

 Score =  487 bits (1253), Expect(2) = e-150
 Identities = 269/395 (68%), Positives = 286/395 (72%), Gaps = 19/395 (4%)
 Frame = -1

Query: 1410 KADMDVETFYDGILAAIVVGEGQTAPVGAPIGLLAETEAEIEEXXXXXXXXXXXXXXXXX 1231
            KADMDVETFYDGILAAIVVG+G+ APVGAPIGLLAETE EI E                 
Sbjct: 94   KADMDVETFYDGILAAIVVGDGEVAPVGAPIGLLAETEEEIAEAKAKASKSGSSAPPPPP 153

Query: 1230 XXXXXXXXXXXXXXXXSNE---------PKKIVATPFAKKLAKQHKVDIKTVNGTGPFGR 1078
                                        PKKIVATPFAKKLAKQHKVDI +V GTGPFGR
Sbjct: 154  APAAASASPAAPAVAPPKSAASAAVPDGPKKIVATPFAKKLAKQHKVDIGSVVGTGPFGR 213

Query: 1077 ITPEDVEAAAGITSKKTSSVINVXXXXXXXXXXXXXXXXP----------IPGATIVPFT 928
            ITP DVEAAAGI+  K++ V  V                P          IPG+T+VPFT
Sbjct: 214  ITPADVEAAAGISPSKSTGVNVVSSVAAAPAPAPVAAAAPKAAASPAPPPIPGSTVVPFT 273

Query: 927  TMQSAVSKNMIESLSVPAFRVGYPVMTDALDALYEKVKPKGVTMTXXXXXXXXXXXAQHP 748
            TMQ+AVSKNM+ESLSVP FRVGYPV+TD LDALYEKVKPKGVTMT           AQHP
Sbjct: 274  TMQAAVSKNMVESLSVPTFRVGYPVLTDKLDALYEKVKPKGVTMTALLAKAAAMALAQHP 333

Query: 747  VVNASCKDGKSFTYXXXXXXXXXXXXNGGLITPVLQDADKLDLYLLSQKWKELVEKARSK 568
            VVNASCKDGK+FTY            NGGLITPVLQDADKLDLYLLSQKWKELVEKAR+K
Sbjct: 334  VVNASCKDGKTFTYNSSINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARAK 393

Query: 567  QLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTGADGFFSVKSKM 388
            QLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVT  DGFFSVKSKM
Sbjct: 394  QLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTDKDGFFSVKSKM 453

Query: 387  LVNVTADHRIVYGADLASFLQTFAKIIQNPESLTL 283
            LVNVTADHRI+YGADLA+FLQTFAKI++NPESLTL
Sbjct: 454  LVNVTADHRIIYGADLAAFLQTFAKIVENPESLTL 488



 Score = 73.6 bits (179), Expect(2) = e-150
 Identities = 38/46 (82%), Positives = 39/46 (84%)
 Frame = -2

Query: 1625 IQAKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGXXXXXXXSDK 1488
            +QAKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKG       SDK
Sbjct: 49   VQAKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDK 94


>ref|XP_002315946.1| predicted protein [Populus trichocarpa] gi|222864986|gb|EEF02117.1|
            predicted protein [Populus trichocarpa]
          Length = 435

 Score =  474 bits (1221), Expect(2) = e-147
 Identities = 261/385 (67%), Positives = 276/385 (71%), Gaps = 9/385 (2%)
 Frame = -1

Query: 1410 KADMDVETFYDGILAAIVVGEGQTAPVGAPIGLLAETEAEIEEXXXXXXXXXXXXXXXXX 1231
            KADMDVETFYDGILAAIVV EG+TAPVGAPIGLLAETE EI E                 
Sbjct: 51   KADMDVETFYDGILAAIVVPEGETAPVGAPIGLLAETEEEIAEAKAKAASKAGGSSSPAT 110

Query: 1230 XXXXXXXXXXXXXXXXS-------NEPKKIVATPFAKKLAKQHKVDIKTVNGTGPFGRIT 1072
                                      P+K VATPFAKKLA+QHKVDI  V GTGP+GRIT
Sbjct: 111  PISPPDSSTPAPAIPQPPPAPAAPEGPRKTVATPFAKKLARQHKVDINKVVGTGPYGRIT 170

Query: 1071 PEDVEAAAGITSKK--TSSVINVXXXXXXXXXXXXXXXXPIPGATIVPFTTMQSAVSKNM 898
            P DVEAAAGI   K   SS                    P+PG+ +VPFT+MQ AVSKNM
Sbjct: 171  PADVEAAAGIAVSKPSVSSASPAAAAAPVMAAASSSAPPPLPGSNVVPFTSMQGAVSKNM 230

Query: 897  IESLSVPAFRVGYPVMTDALDALYEKVKPKGVTMTXXXXXXXXXXXAQHPVVNASCKDGK 718
            +ESLSVP FRVGYP+ TDALDALYEKVKPKGVTMT            QHPVVNASCKDGK
Sbjct: 231  VESLSVPTFRVGYPITTDALDALYEKVKPKGVTMTALLAKAAAMALVQHPVVNASCKDGK 290

Query: 717  SFTYXXXXXXXXXXXXNGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEYNSG 538
            SFTY            NGGLITPVLQDADKLDLYLLS+KWKELVEKAR+KQLQP EYNSG
Sbjct: 291  SFTYNSNINIAVAVAINGGLITPVLQDADKLDLYLLSKKWKELVEKARAKQLQPQEYNSG 350

Query: 537  TFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTGADGFFSVKSKMLVNVTADHRI 358
            TFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVV   DGFFSVKSKMLVNVTADHRI
Sbjct: 351  TFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVADKDGFFSVKSKMLVNVTADHRI 410

Query: 357  VYGADLASFLQTFAKIIQNPESLTL 283
            VYGADLA+FLQTFAKI++NPESLTL
Sbjct: 411  VYGADLAAFLQTFAKIVENPESLTL 435



 Score = 74.3 bits (181), Expect(2) = e-147
 Identities = 38/47 (80%), Positives = 40/47 (85%)
 Frame = -2

Query: 1628 KIQAKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGXXXXXXXSDK 1488
            ++QAKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKG       SDK
Sbjct: 5    RVQAKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDK 51


>ref|XP_002529121.1| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
            dehydrogenase, putative [Ricinus communis]
            gi|223531400|gb|EEF33234.1| Dihydrolipoyllysine-residue
            acetyltransferase component of pyruvate dehydrogenase,
            putative [Ricinus communis]
          Length = 483

 Score =  475 bits (1222), Expect(2) = e-146
 Identities = 264/388 (68%), Positives = 281/388 (72%), Gaps = 12/388 (3%)
 Frame = -1

Query: 1410 KADMDVETFYDGILAAIVVGEGQTAPVGAPIGLLAETEAEIEEXXXXXXXXXXXXXXXXX 1231
            KADMDVETFYDGILAAIVV EG++APVGAPIGLLAETE EI E                 
Sbjct: 96   KADMDVETFYDGILAAIVVPEGESAPVGAPIGLLAETEDEIAEAKAKANANTNASSSQTT 155

Query: 1230 XXXXXXXXXXXXXXXXS-----------NEPKKIVATPFAKKLAKQHKVDIKTVNGTGPF 1084
                            +             PKKIVATP+A+KLAKQH VDI  + G+GP 
Sbjct: 156  AAVAPTPPPVSSTRAPAIAQPAPAASAPEGPKKIVATPYARKLAKQHTVDINKLVGSGPN 215

Query: 1083 GRITPEDVEAAAGITSKKTSSVINVXXXXXXXXXXXXXXXXP-IPGATIVPFTTMQSAVS 907
            GRITP DVEAAAGI S  ++ V                   P +PG+T+VPFTTMQSAVS
Sbjct: 216  GRITPADVEAAAGIKSVASAPVAAAAPAAAPAKAPPAAAAPPPLPGSTVVPFTTMQSAVS 275

Query: 906  KNMIESLSVPAFRVGYPVMTDALDALYEKVKPKGVTMTXXXXXXXXXXXAQHPVVNASCK 727
            KNM+ESLSVP FRVGYP+ TDALDALYEKVKPKGVTMT           AQHPVVNASCK
Sbjct: 276  KNMVESLSVPTFRVGYPISTDALDALYEKVKPKGVTMTALLAKAAAMALAQHPVVNASCK 335

Query: 726  DGKSFTYXXXXXXXXXXXXNGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEY 547
            DGKSFTY            NGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEY
Sbjct: 336  DGKSFTYNSNINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEY 395

Query: 546  NSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTGADGFFSVKSKMLVNVTAD 367
            NSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVV   DGFFSVKSKMLVNVTAD
Sbjct: 396  NSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVADKDGFFSVKSKMLVNVTAD 455

Query: 366  HRIVYGADLASFLQTFAKIIQNPESLTL 283
            HRIVYGADLA+FLQTFAKI++NPESLTL
Sbjct: 456  HRIVYGADLAAFLQTFAKIVENPESLTL 483



 Score = 72.0 bits (175), Expect(2) = e-146
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = -2

Query: 1628 KIQAKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGXXXXXXXSDK 1488
            ++Q+KIREIFMPALSSTMTEGKIVSWIK+EGDVLSKG       SDK
Sbjct: 50   RVQSKIREIFMPALSSTMTEGKIVSWIKAEGDVLSKGESVVVVESDK 96


>ref|XP_003555893.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of
            pyruvate dehydrogenase complex-like [Glycine max]
          Length = 472

 Score =  468 bits (1204), Expect(2) = e-144
 Identities = 256/385 (66%), Positives = 277/385 (71%), Gaps = 9/385 (2%)
 Frame = -1

Query: 1410 KADMDVETFYDGILAAIVVGEGQTAPVGAPIGLLAETEAEIEEXXXXXXXXXXXXXXXXX 1231
            KADMDVETFYDGILAAIVV +G+TAPVGAPIGLLA++  E+ E                 
Sbjct: 88   KADMDVETFYDGILAAIVVADGETAPVGAPIGLLADSPEEVAEAKAKAAKSVPSGSPAPA 147

Query: 1230 XXXXXXXXXXXXXXXXSNE----PKKIVATPFAKKLAKQHKVDIKTVNGTGPFGRITPED 1063
                            +      P KIVATP AKKLAKQHKVDI TV GTGPFGRITP D
Sbjct: 148  SPSDPSPATPPPPPPPAKSVSEGPAKIVATPQAKKLAKQHKVDIATVAGTGPFGRITPAD 207

Query: 1062 VEAAAGITSKKTSSV-----INVXXXXXXXXXXXXXXXXPIPGATIVPFTTMQSAVSKNM 898
            VEAAAGI   K +                          PIPG+++VPFTTMQSAV+KNM
Sbjct: 208  VEAAAGIAPSKRNVAPAAIPAPATPAPPSKAASGSAAPAPIPGSSVVPFTTMQSAVAKNM 267

Query: 897  IESLSVPAFRVGYPVMTDALDALYEKVKPKGVTMTXXXXXXXXXXXAQHPVVNASCKDGK 718
            +ESLSVP FRVGYPV TDALDALYEKVKPKGVTMT            QHPVVNA+CKDGK
Sbjct: 268  MESLSVPTFRVGYPVTTDALDALYEKVKPKGVTMTAILAKAAAMALVQHPVVNATCKDGK 327

Query: 717  SFTYXXXXXXXXXXXXNGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEYNSG 538
            +F Y            NGGLITPVLQDADKLDLYLLSQKWKELVEKAR+KQLQPHEYNSG
Sbjct: 328  NFVYNGNINVAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARAKQLQPHEYNSG 387

Query: 537  TFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTGADGFFSVKSKMLVNVTADHRI 358
            TFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTV+   DGFFSVK+KMLVNVTADHRI
Sbjct: 388  TFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVLADKDGFFSVKNKMLVNVTADHRI 447

Query: 357  VYGADLASFLQTFAKIIQNPESLTL 283
            +YGADLA+FLQTF+KII+NPESLTL
Sbjct: 448  IYGADLAAFLQTFSKIIENPESLTL 472



 Score = 72.4 bits (176), Expect(2) = e-144
 Identities = 37/46 (80%), Positives = 39/46 (84%)
 Frame = -2

Query: 1625 IQAKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGXXXXXXXSDK 1488
            +QAKIREIFMPALSSTMTEGKIVSWIKSEGD+LSKG       SDK
Sbjct: 43   VQAKIREIFMPALSSTMTEGKIVSWIKSEGDMLSKGDSVVVVESDK 88


Top