BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012395
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14

>ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/58 (74%), Positives = 52/58 (89%)
 Frame = +1

Query: 4   EVAEYAAQNLLDLDPTSAAGYVQLANVYAAMNKWDQVGRVRQLMKDNKVVKSPGYTTI 177
           E+AE+AA+NLL+LDP SAAGYVQLANVYAAMN+WD V  VR+ MKDNKV+K+PGY+ I
Sbjct: 413 ELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWI 470


>ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/58 (68%), Positives = 52/58 (89%)
 Frame = +1

Query: 4   EVAEYAAQNLLDLDPTSAAGYVQLANVYAAMNKWDQVGRVRQLMKDNKVVKSPGYTTI 177
           ++AE+AA+NLL+LDPTSA GYVQLAN+YAA NKWDQV +VR++MK++ VVK PGY+ I
Sbjct: 481 DLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWI 538


>ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/58 (68%), Positives = 52/58 (89%)
 Frame = +1

Query: 4   EVAEYAAQNLLDLDPTSAAGYVQLANVYAAMNKWDQVGRVRQLMKDNKVVKSPGYTTI 177
           ++AE+AA+NLL+LDPTSA GYVQLAN+YAA NKWDQV +VR++MK++ VVK PGY+ I
Sbjct: 481 DLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWI 538


>ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/57 (68%), Positives = 47/57 (82%)
 Frame = +1

Query: 7   VAEYAAQNLLDLDPTSAAGYVQLANVYAAMNKWDQVGRVRQLMKDNKVVKSPGYTTI 177
           +AE+AA+NLL+LDPT A GYVQLANVYAA N+WD V  +R+ MKDN VVK PGY+ I
Sbjct: 450 LAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWI 506


>ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|222840806|gb|EEE78353.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/59 (66%), Positives = 48/59 (81%)
 Frame = +1

Query: 1   SEVAEYAAQNLLDLDPTSAAGYVQLANVYAAMNKWDQVGRVRQLMKDNKVVKSPGYTTI 177
           +E+AE+A+Q LL+LDP SA GYVQLANVYAA  +WD V RVR+ MK  KVVK+PGY+ I
Sbjct: 382 TEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWI 440