BLASTX nr result

ID: Coptis23_contig00012393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012393
         (1459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280909.1| PREDICTED: uncharacterized protein LOC100262...   201   4e-49
ref|XP_002320928.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-44
ref|XP_002515161.1| conserved hypothetical protein [Ricinus comm...   185   2e-44
emb|CAN75643.1| hypothetical protein VITISV_029180 [Vitis vinifera]   176   1e-41
ref|XP_002302701.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-41

>ref|XP_002280909.1| PREDICTED: uncharacterized protein LOC100262404 [Vitis vinifera]
          Length = 292

 Score =  201 bits (511), Expect = 4e-49
 Identities = 127/255 (49%), Positives = 155/255 (60%), Gaps = 23/255 (9%)
 Frame = +1

Query: 385  HHPHNLSRLSICSSKQSIFDFDDTCAXXXXXXXXXXXXXXXLSIESSYGEGEADEEFSDD 564
            HHPHNLSRLS+C+      D D+  A               + IESS  +G+ADEE SDD
Sbjct: 38   HHPHNLSRLSMCNLNSMSLDEDEDDANGVGTSI--------MLIESS--DGDADEELSDD 87

Query: 565  HSKGENVSGASSDSDKDIGSSLSLPGTPRTLQKHGDAHK----EYYCSETEAGGKGFIKN 732
                E + G  SDSDK+ G   SLP TP   +  G   K    + Y SE EA  K  +K 
Sbjct: 88   KEGKEELGGLLSDSDKEPGC-YSLPATPPRRRNRGGLLKVVGVKEYASENEAQ-KSSLKQ 145

Query: 733  KTKRNSRRRVAREKWLESEWEKKQHKAK--------------SMDGESEG---LVLTKPN 861
            + KR  R +V REK  E  W+ ++ K +              S  GESEG   +V+T+P 
Sbjct: 146  RMKRR-RAKVVREKREEMTWDNRKKKEEEGYGSVPCGGGGFTSFSGESEGAGLVVITRPK 204

Query: 862  GGRKSMCMDLGEVKACRDLGFELEHPRMLEIPTQHSF--STMDTASSGGNSPISNWRISS 1035
            GGR+S+CMDL EVKACRDLGFELEH RMLEIPT+ S   ST++T SSGGNSPI++WRISS
Sbjct: 205  GGRRSLCMDLEEVKACRDLGFELEHERMLEIPTRISISGSTLET-SSGGNSPIASWRISS 263

Query: 1036 PGDDPKDVKARLKVW 1080
            PGDDP+DVKARLKVW
Sbjct: 264  PGDDPRDVKARLKVW 278


>ref|XP_002320928.1| predicted protein [Populus trichocarpa] gi|222861701|gb|EEE99243.1|
            predicted protein [Populus trichocarpa]
          Length = 292

 Score =  186 bits (473), Expect = 1e-44
 Identities = 122/256 (47%), Positives = 154/256 (60%), Gaps = 27/256 (10%)
 Frame = +1

Query: 394  HNLSRLSICSSKQSIFDFDDTCAXXXXXXXXXXXXXXXLSIESSYGEGEADEEFSDDHSK 573
            HNLSRLS+C+S     + DD                  L  E+     +ADEE SDDH +
Sbjct: 34   HNLSRLSMCTSSLYTNEDDD-----YQDCDGMKMFLSRLPAENF----DADEELSDDHKE 84

Query: 574  GENVS--GASSDSDKDIGSSLSLPGTPRTLQKHGDAHKEY-------YCSETEAGGKGFI 726
            G N +    SSDSD++ G   SLP TP   +  G    +        Y SE EA  KG  
Sbjct: 85   GNNKNTLDLSSDSDEEPGC-YSLPATPPRRRNRGGLINQVQLLGAKDYASENEAQ-KGIT 142

Query: 727  KNKTKRNSR-RRVAREKWLESE---WEKKQHK---------AKSMDGESEG---LVLTKP 858
            + K ++N R RRV RE+W+++    ++KK+ +           S  GESEG   +V+T+P
Sbjct: 143  RQKMRKNLRKRRVIRERWMDNNNMSFKKKEEEMTGVSNYGYCNSFSGESEGGGLVVITRP 202

Query: 859  NGGRKSMCMDLGEVKACRDLGFELEHPRMLEIPTQHSF--STMDTASSGGNSPISNWRIS 1032
             GGR+S+CMDL EVKACRDLGFELEH RMLE+P + S   ST+DT SSGGNSPI+NWRIS
Sbjct: 203  KGGRRSLCMDLDEVKACRDLGFELEHERMLEMPGRVSLSGSTLDT-SSGGNSPIANWRIS 261

Query: 1033 SPGDDPKDVKARLKVW 1080
            SPGDDP+DVKARLKVW
Sbjct: 262  SPGDDPRDVKARLKVW 277


>ref|XP_002515161.1| conserved hypothetical protein [Ricinus communis]
            gi|223545641|gb|EEF47145.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 295

 Score =  185 bits (470), Expect = 2e-44
 Identities = 126/270 (46%), Positives = 159/270 (58%), Gaps = 35/270 (12%)
 Frame = +1

Query: 376  HDQHHPHNLSRLSICSSKQSIFDFDDTCAXXXXXXXXXXXXXXXLSIESSYGEGEADEEF 555
            H   H HNLSRLS+C+S     + DD                  LSIES     +ADEE 
Sbjct: 26   HQLPHQHNLSRLSVCTSSMHTNEDDD-----YQDCDGMKMFMSRLSIESF----DADEEL 76

Query: 556  SDDHSKGE-NVSGASSDSDKDIGSSLSLPGTPRTLQKHGDAHK---------EYYCSETE 705
            SDD  +G  ++   SSDSDK+ G   SLP TP   +  G             + Y SE E
Sbjct: 77   SDDEKEGVISMLDLSSDSDKEPGC-YSLPATPPRRRNRGGGGVVKLRDVVGGKEYASENE 135

Query: 706  AGGKGFIKNKTKRNSRR--RVAREKWLESEW------EKKQHKA------------KSMD 825
            A  KG   N T++NSRR  RV RE+W++S+       +KK+ ++             S  
Sbjct: 136  AQ-KG---NHTRKNSRRKRRVIRERWIDSDNNNNKSDKKKEEESIGLGMCNYYGNGNSFS 191

Query: 826  GESEG---LVLTKPNGGRKSMCMDLGEVKACRDLGFELEHPRMLEIPTQHSF--STMDTA 990
            GESE    +V+T+P GG++++CMDL EVKACRDLGFELEH RMLE+P++ S   ST+DT 
Sbjct: 192  GESENGGVVVITRPKGGKRALCMDLDEVKACRDLGFELEHERMLEMPSRVSLSGSTLDT- 250

Query: 991  SSGGNSPISNWRISSPGDDPKDVKARLKVW 1080
            SSGGNSPI+NWRISSPGDDP+DVKARLKVW
Sbjct: 251  SSGGNSPIANWRISSPGDDPRDVKARLKVW 280


>emb|CAN75643.1| hypothetical protein VITISV_029180 [Vitis vinifera]
          Length = 283

 Score =  176 bits (447), Expect = 1e-41
 Identities = 116/245 (47%), Positives = 143/245 (58%), Gaps = 23/245 (9%)
 Frame = +1

Query: 385  HHPHNLSRLSICSSKQSIFDFDDTCAXXXXXXXXXXXXXXXLSIESSYGEGEADEEFSDD 564
            HHPHNLSRLS+C+      D D+  A               + IESS  +G+ADEE SDD
Sbjct: 38   HHPHNLSRLSMCNLNSMSLDEDEDDANGVGTSM--------MLIESS--DGDADEELSDD 87

Query: 565  HSKGENVSGASSDSDKDIGSSLSLPGTPRTLQKHGDAHK----EYYCSETEAGGKGFIKN 732
                E + G  SDSDK+ G   SLP TP   +  G   K    + Y SE EA  K  +K 
Sbjct: 88   KEGKEELGGLLSDSDKEPGC-YSLPATPPRRRNRGGLLKVVGVKEYASENEAQ-KSSLKQ 145

Query: 733  KTKRNSRRRVAREKWLESEWEKKQHKAK--------------SMDGESEG---LVLTKPN 861
            + KR  R +V REK  E  W+ ++ K +              S  GESEG   +V+T+P 
Sbjct: 146  RMKRR-RAKVVREKREEMTWDNRKKKEEEGYGSVPCGGGGFTSFSGESEGAGLVVITRPK 204

Query: 862  GGRKSMCMDLGEVKACRDLGFELEHPRMLEIPTQHSF--STMDTASSGGNSPISNWRISS 1035
            GGR+S+CMDL EVKACRDLGFELEH RMLEIPT+ S   ST++T SSGGNSPI++WRISS
Sbjct: 205  GGRRSLCMDLEEVKACRDLGFELEHERMLEIPTRISISGSTLET-SSGGNSPIASWRISS 263

Query: 1036 PGDDP 1050
            PG  P
Sbjct: 264  PGKPP 268


>ref|XP_002302701.1| predicted protein [Populus trichocarpa] gi|222844427|gb|EEE81974.1|
            predicted protein [Populus trichocarpa]
          Length = 234

 Score =  176 bits (446), Expect = 1e-41
 Identities = 111/219 (50%), Positives = 142/219 (64%), Gaps = 28/219 (12%)
 Frame = +1

Query: 508  LSIESSYGEGEADEEFSDDHSKG--ENVSGASSDSDKDIGSSLSLPGTPRTLQKHGDAHK 681
            L+IES     +ADEE SDD  +G  +N+   SSDSDK+ G   SLP TP   +  G    
Sbjct: 8    LTIESF----DADEELSDDQKEGNHKNILHLSSDSDKETGC-YSLPATPPRWRNRGGPRN 62

Query: 682  EY-------YCSETEAGGKGFIKNKTKRNSR-RRVAREKWLESE---WEKKQHK------ 810
            +        Y SE EA  KG ++ K ++N R RRV RE+ +++    ++KK+ +      
Sbjct: 63   QVQLIGVTDYASENEAQ-KGIMRQKMRKNLRKRRVIRERRMDNSNTSFKKKEEEITGLSN 121

Query: 811  ---AKSMDGESEG---LVLTKPNGGRKSMCMDLGEVKACRDLGFELEHPRMLEIPTQH-- 966
                 S  GESEG   +V+T+P GGR+S+CMDL EVKACRDLGFELEH RMLE+P+    
Sbjct: 122  YGSCNSFSGESEGGGLVVITRPKGGRRSLCMDLEEVKACRDLGFELEHERMLELPSSRVS 181

Query: 967  -SFSTMDTASSGGNSPISNWRISSPGDDPKDVKARLKVW 1080
             S ST+DT SSGG+SPI+NWRISSPGDDP+DVKARLKVW
Sbjct: 182  LSGSTLDT-SSGGDSPIANWRISSPGDDPRDVKARLKVW 219


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