BLASTX nr result

ID: Coptis23_contig00012392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012392
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis]        145   8e-33
ref|ZP_01962138.1| hypothetical protein BACCAC_03786 [Bacteroide...   109   4e-28
ref|ZP_09106673.1| hypothetical protein HMPREF9441_00676 [Parapr...   115   1e-24
ref|ZP_06090968.1| conserved hypothetical protein [Bacteroides s...   109   6e-23
ref|ZP_02038208.1| hypothetical protein BACCAP_03832 [Bacteroide...   103   4e-20

>gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis]
          Length = 104

 Score =  145 bits (367), Expect = 8e-33
 Identities = 74/100 (74%), Positives = 78/100 (78%)
 Frame = -2

Query: 487 MQHLENCPKKALFLKLSIPI*VLVRFLAYHRIKPHNPPLVRAPVNSFEFHSCERTPQVAN 308
           MQHL  CPKKAL LK S  I V VRFLAYHRIKPH PPLVR PVNSFEFH C RTPQV N
Sbjct: 1   MQHLSFCPKKALSLKRSKRIRVQVRFLAYHRIKPHAPPLVRTPVNSFEFHRCRRTPQVEN 60

Query: 307 LSLSLGL*TLKPKNELASFTAWTTRVSNPVRSPRFRPSAS 188
            S+SLGL   + + E +SFTAWTTRVSNPVRSPRFR S S
Sbjct: 61  FSVSLGLACQRTQAEFSSFTAWTTRVSNPVRSPRFRASVS 100


>ref|ZP_01962138.1| hypothetical protein BACCAC_03786 [Bacteroides caccae ATCC 43185]
           gi|149127930|gb|EDM19152.1| hypothetical protein
           BACCAC_03786 [Bacteroides caccae ATCC 43185]
          Length = 153

 Score =  109 bits (272), Expect(2) = 4e-28
 Identities = 57/81 (70%), Positives = 60/81 (74%)
 Frame = +2

Query: 575 DSSETAYASREEGGDDVKSSRPLRLGPHT*YNGRYRGQLHSDVMQISKAGLSSDWSLQLD 754
           DS ETA    EEGGDDVKS+RPLR G HT YNG YR  L  D M I K  LSSD SLQ D
Sbjct: 48  DSGETAVVRCEEGGDDVKSARPLRPGLHTCYNGGYRRPLPGDRMPIPKTSLSSDRSLQPD 107

Query: 755 SMKLESLVIAHQPWRGEYVPG 817
            +KL+SLVIAHQPWRGEYVPG
Sbjct: 108 FVKLDSLVIAHQPWRGEYVPG 128



 Score = 42.0 bits (97), Expect(2) = 4e-28
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +1

Query: 475 QGAAWLSSARAVRC*VKSCNERNP 546
           +GAAWLSSARAVRC +K  NERNP
Sbjct: 14  EGAAWLSSARAVRCRLKCHNERNP 37


>ref|ZP_09106673.1| hypothetical protein HMPREF9441_00676 [Paraprevotella clara YIT
           11840] gi|355532046|gb|EHH01436.1| hypothetical protein
           HMPREF9441_00676 [Paraprevotella clara YIT 11840]
          Length = 129

 Score =  115 bits (288), Expect(2) = 1e-24
 Identities = 58/84 (69%), Positives = 62/84 (73%)
 Frame = +2

Query: 566 SVGDSSETAYASREEGGDDVKSSRPLRLGPHT*YNGRYRGQLHSDVMQISKAGLSSDWSL 745
           + G S +TA    EEGGDDVKS+RPLR G HT YNG YRG L  D   I K  LSSDWSL
Sbjct: 21  NAGPSGDTAIVRCEEGGDDVKSARPLRPGLHTCYNGGYRGPLSGDGWPIPKTPLSSDWSL 80

Query: 746 QLDSMKLESLVIAHQPWRGEYVPG 817
           Q DS KL+SLVIAHQPWRGEYVPG
Sbjct: 81  QPDSTKLDSLVIAHQPWRGEYVPG 104



 Score = 24.3 bits (51), Expect(2) = 1e-24
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 508 VRC*VKSCNERNPCH*LPSFSWG 576
           +RC +K  NERNP   LPS + G
Sbjct: 1   MRCRLKCHNERNPSPQLPSGNAG 23


>ref|ZP_06090968.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
           gi|263233441|gb|EEZ19090.1| conserved hypothetical
           protein [Bacteroides sp. 3_1_33FAA]
          Length = 129

 Score =  109 bits (273), Expect(2) = 6e-23
 Identities = 57/81 (70%), Positives = 61/81 (75%)
 Frame = +2

Query: 575 DSSETAYASREEGGDDVKSSRPLRLGPHT*YNGRYRGQLHSDVMQISKAGLSSDWSLQLD 754
           DS +TA    EEGGDDVKS+RPLR G HT YNG YRG L  + M I K  LSSDWSLQ D
Sbjct: 24  DSDKTAIVRCEEGGDDVKSARPLRPGLHTCYNGGYRGPLPREWMPIPKTPLSSDWSLQPD 83

Query: 755 SMKLESLVIAHQPWRGEYVPG 817
           S KL+SLVIAHQP RGEYVPG
Sbjct: 84  STKLDSLVIAHQPRRGEYVPG 104



 Score = 24.3 bits (51), Expect(2) = 6e-23
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 508 VRC*VKSCNERNPC 549
           +RC +K  NERNPC
Sbjct: 1   MRCRLKCHNERNPC 14


>ref|ZP_02038208.1| hypothetical protein BACCAP_03832 [Bacteroides capillosus ATCC
           29799] gi|154500791|ref|ZP_02038829.1| hypothetical
           protein BACCAP_04474 [Bacteroides capillosus ATCC 29799]
           gi|150270408|gb|EDM97731.1| hypothetical protein
           BACCAP_04474 [Pseudoflavonifractor capillosus ATCC
           29799] gi|150271077|gb|EDM98346.1| hypothetical protein
           BACCAP_03832 [Pseudoflavonifractor capillosus ATCC
           29799]
          Length = 117

 Score =  103 bits (258), Expect = 4e-20
 Identities = 60/91 (65%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = -3

Query: 348 LSFTLASVLPRWLTYHFRLVSEP*SPKT-S*HRLRRGLPGYLILFAPHAFVPQRQLYLGN 172
           +SF LA VLPRW TY     +E  SP T S HRLRRGLPGYLILFAPHAF PQRQL   N
Sbjct: 1   MSFNLAIVLPRWDTYCVNCGTEGVSPPTPSIHRLRRGLPGYLILFAPHAFAPQRQLLSSN 60

Query: 171 LPSQLVF*VISMHFTATLLIPATSNILKTYS 79
            PS LVF  IS HFTAT  IP  S  LK YS
Sbjct: 61  PPSPLVFLRISTHFTATHGIPIASPALKNYS 91


Top